Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797453
Identifier: 108797453
GI number: 108797453
Start: 527841
End: 528506
Strand: Reverse
Name: 108797453
Synonym: Mmcs_0473
Alternate gene names: NA
Gene position: 528506-527841 (Counterclockwise)
Preceding gene: 108797454
Following gene: 108797451
Centisome position: 9.26
GC content: 67.72
Gene sequence:
>666_bases ATGACCGGCAGTTGGGGAACTGTGCTGACCGAACTGATTCCGCTTGCCCTGGTGATCGCGCTCTCGCCGTTGTCGATCAT CCCCGCGGTGCTGATGCTCCAGACTCCCCGACCGCGGCCGACCGCCCTCGCCTTCATGGCGGGCTGGCTGATCGGCCTCG GGGCACTGACGGCGATCTTCGTCGCGGTGTCCGGTGCGATCGGCGGCTTCGAGAAGCCGCCCAGCTGGGCGTCGTGGTTG CGCATCGTGATCGGCGCCGCGCTGATCGTCTTCGGCCTGGTCCGATTCGCGCGCCGACATTCCTCGTCGCACCAGCCGAA GTGGCTGCGCAACCTGACCACCCTCGGCCCGGGCCGGGCCGCGGGCACCGCCGCGGTACTGACCGTCGCCAATCCGAAGG TCCTGTTCATCTGTGTCGCAGCGGGTTTGGCGATCGGCTCAGCGGGCCTCGGCAATGCGGTGTGGGCCGCGGTGGTCTAC TTCGCCGCGATCGCGGGCTGCAGCGTCGCGGTGCCGATCCTGGCCTACGCGGTGTCGGGCGGTCGACTCGACGATCCGCT CGCGCGCCTCAAGGACTGGATGGAGCGCAACCACGCCACGCTGATGGCGGTGATACTCGTCGTCATCGGACTTCTGGTCC TGTACAAGGGAATTCACACACTCTGA
Upstream 100 bases:
>100_bases TGACTGAGCCGGCCTCGGCGACGCGCTGACGAGGCGCACTCATTCGAAACCGGCCGAGTGTGACTACGTTGAGTGCGACA TCCGGACCGAAGGAGCGTGC
Downstream 100 bases:
>100_bases GCCGGTAGCCCCAGCTCCTCGGCGTCGGCGGTGAGATAGCGCGTCACCGTCGGGGCCAGCAGCGCGACGAGATCCTCGGT CGGGATCGTCGCCAGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTGSWGTVLTELIPLALVIALSPLSIIPAVLMLQTPRPRPTALAFMAGWLIGLGALTAIFVAVSGAIGGFEKPPSWASWL RIVIGAALIVFGLVRFARRHSSSHQPKWLRNLTTLGPGRAAGTAAVLTVANPKVLFICVAAGLAIGSAGLGNAVWAAVVY FAAIAGCSVAVPILAYAVSGGRLDDPLARLKDWMERNHATLMAVILVVIGLLVLYKGIHTL
Sequences:
>Translated_221_residues MTGSWGTVLTELIPLALVIALSPLSIIPAVLMLQTPRPRPTALAFMAGWLIGLGALTAIFVAVSGAIGGFEKPPSWASWL RIVIGAALIVFGLVRFARRHSSSHQPKWLRNLTTLGPGRAAGTAAVLTVANPKVLFICVAAGLAIGSAGLGNAVWAAVVY FAAIAGCSVAVPILAYAVSGGRLDDPLARLKDWMERNHATLMAVILVVIGLLVLYKGIHTL >Mature_220_residues TGSWGTVLTELIPLALVIALSPLSIIPAVLMLQTPRPRPTALAFMAGWLIGLGALTAIFVAVSGAIGGFEKPPSWASWLR IVIGAALIVFGLVRFARRHSSSHQPKWLRNLTTLGPGRAAGTAAVLTVANPKVLFICVAAGLAIGSAGLGNAVWAAVVYF AAIAGCSVAVPILAYAVSGGRLDDPLARLKDWMERNHATLMAVILVVIGLLVLYKGIHTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23046; Mature: 22915
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSWGTVLTELIPLALVIALSPLSIIPAVLMLQTPRPRPTALAFMAGWLIGLGALTAIF CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VAVSGAIGGFEKPPSWASWLRIVIGAALIVFGLVRFARRHSSSHQPKWLRNLTTLGPGRA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC AGTAAVLTVANPKVLFICVAAGLAIGSAGLGNAVWAAVVYFAAIAGCSVAVPILAYAVSG CCHHEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRLDDPLARLKDWMERNHATLMAVILVVIGLLVLYKGIHTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGSWGTVLTELIPLALVIALSPLSIIPAVLMLQTPRPRPTALAFMAGWLIGLGALTAIF CCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VAVSGAIGGFEKPPSWASWLRIVIGAALIVFGLVRFARRHSSSHQPKWLRNLTTLGPGRA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC AGTAAVLTVANPKVLFICVAAGLAIGSAGLGNAVWAAVVYFAAIAGCSVAVPILAYAVSG CCHHEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRLDDPLARLKDWMERNHATLMAVILVVIGLLVLYKGIHTL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA