| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is iniC [H]
Identifier: 108797428
GI number: 108797428
Start: 502038
End: 503546
Strand: Direct
Name: iniC [H]
Synonym: Mmcs_0448
Alternate gene names: 108797428
Gene position: 502038-503546 (Clockwise)
Preceding gene: 108797427
Following gene: 108797429
Centisome position: 8.8
GC content: 70.91
Gene sequence:
>1509_bases GTGCGCGCGATCCTGGGCGGCACCATCGCGGCCTACCGGGACGATCCGGCGTACCGTCAGCGCCCCGAGGTGCACAACGA ACTCGAACGCATCGGCGCCCGGCTCAACCAGCCGATCCGCATCGCGCTGGCCGGCACGCTGAAGGCCGGTAAGTCGACAC TCGTCAACGCGCTGGTCGGCGAGGAGATCGCACCCACCGACGCGACCGAGGCCACCCGCATCGTCACGTGGTTCCGCCAC GGCCCCACCCCGAAGGTGACGGCCAACCACCGCGGCGGCCGCCGGTCGAACGTGCCGATCGCGCGCAGGTCGAGCGGCCC CGCCGACGAGCGGGGTCTGACCTTCGACCTGGCCAGGCTCGACCCCGACGACGTGCTCGACCTCGACGTGGAGTGGCCTG CCGCCGAACTGATCGACTCGACGATCATCGACACCCCGGGCACGTCGTCGCTGTCCCGCGATGTCTCGGAGCGCACGTTG CGGCTGCTGGTGCCCGGTGACGGGGTGCCCCGGGTCGACGCCGTGGTGTTCCTGCTGCGCACGCTCAACGCCGCCGACAT CGCGCTGCTCAAACAGATCGGTGAACTGGTCGGCGGCTCATCGGGGGCGCTCGGCGTGATCGGGGTGGCCTCGCGGGCCG ACGAGATCGGCGCCGGCCGCATCGATGCGATGCTCTCGGCGAAGGACGTCGCCACCCGGTTCACCGAGGAGATGGACCGC ACCGGTATCTGCCAGGCGGTCGTGCCGGTCTCGGGGCTGCTCGCGCTGACCGCGCGCACGCTGCGGCAGAGCGAGTTCGT GGCGCTGGAGAAACTCGCAGGCGTGGATCCCGCCGAGTTGGCGAAGGCCATGCTGTCGGTGGACCGGTTCGTGCGCGAGG ACAGTCCGCTGCCCATCGACGCGGCGACCCGCGCCGCGCTGCTGGACCGGTTCGGCATGTTCGGCGTGCGGATCTCGATC GCCGTGCTGCGCGCGGGGGTCAAGGATTCGGTGGCGCTGGCCGACGAACTGCTCGAACGCAGCGGCCTGGTGGCGTTGCG CGACGTGATCGACCAGCAGTTCGCGCAGCGCTCCGACCTGCTCAAGGCGCATACGGCGCTGCTGTCGCTGCGGCAGTTCG TTCAGCTCAACCCGATCTACGCGACCCCGTACATCATCGCCGACATCGACCCGCTGCTCGCCGACACCCATGCGTTCGAG GAGCTCCGGTTGCTGAGTCAACTGCGTTCGCGGACAACGACGTTGACCGACGACGAGATGGCCTCGCTGCGGCGATTGAT CGGCGGTTCGGGTACCGACGCGGCCAGCCGGCTGGGGTTGCAGCCCGAGGACCCCTACGACGGGCCGCGGGCGGCGTTCG CCGCGGCGCAGCGGTGGCGTCGGCGTGCCGAGCATCCGCTCAACGACCCCTTCACCGCGAGGGCCTGCCGGGCGGCGGTG CGCAGTGCCGAAGCGCTGGTCGCCGCGTACGCGGCGAAGGGCCGGTCTTACCGGGACGGACCCGCTTAA
Upstream 100 bases:
>100_bases TCGCCGCGCCCTGACCGGCGGACCGGGTCTGGCAAGCTCGTAGCGTCAGCGAGTCGGGTAACTGGAACGGACTGGGCAAA CCCTGAGCACAAGCGACCAA
Downstream 100 bases:
>100_bases CGTTTGTGCGCGCCGCGACGACAAACAGGTATGCGCACTTCTCTCGGCGTATCCCTGGGCGCGGCCAACCTGGTCGCCGT CGCCGACGGACGCCCGACCA
Product: isoniazid inductible gene protein IniC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MRAILGGTIAAYRDDPAYRQRPEVHNELERIGARLNQPIRIALAGTLKAGKSTLVNALVGEEIAPTDATEATRIVTWFRH GPTPKVTANHRGGRRSNVPIARRSSGPADERGLTFDLARLDPDDVLDLDVEWPAAELIDSTIIDTPGTSSLSRDVSERTL RLLVPGDGVPRVDAVVFLLRTLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMLSAKDVATRFTEEMDR TGICQAVVPVSGLLALTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSPLPIDAATRAALLDRFGMFGVRISI AVLRAGVKDSVALADELLERSGLVALRDVIDQQFAQRSDLLKAHTALLSLRQFVQLNPIYATPYIIADIDPLLADTHAFE ELRLLSQLRSRTTTLTDDEMASLRRLIGGSGTDAASRLGLQPEDPYDGPRAAFAAAQRWRRRAEHPLNDPFTARACRAAV RSAEALVAAYAAKGRSYRDGPA
Sequences:
>Translated_502_residues MRAILGGTIAAYRDDPAYRQRPEVHNELERIGARLNQPIRIALAGTLKAGKSTLVNALVGEEIAPTDATEATRIVTWFRH GPTPKVTANHRGGRRSNVPIARRSSGPADERGLTFDLARLDPDDVLDLDVEWPAAELIDSTIIDTPGTSSLSRDVSERTL RLLVPGDGVPRVDAVVFLLRTLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMLSAKDVATRFTEEMDR TGICQAVVPVSGLLALTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSPLPIDAATRAALLDRFGMFGVRISI AVLRAGVKDSVALADELLERSGLVALRDVIDQQFAQRSDLLKAHTALLSLRQFVQLNPIYATPYIIADIDPLLADTHAFE ELRLLSQLRSRTTTLTDDEMASLRRLIGGSGTDAASRLGLQPEDPYDGPRAAFAAAQRWRRRAEHPLNDPFTARACRAAV RSAEALVAAYAAKGRSYRDGPA >Mature_502_residues MRAILGGTIAAYRDDPAYRQRPEVHNELERIGARLNQPIRIALAGTLKAGKSTLVNALVGEEIAPTDATEATRIVTWFRH GPTPKVTANHRGGRRSNVPIARRSSGPADERGLTFDLARLDPDDVLDLDVEWPAAELIDSTIIDTPGTSSLSRDVSERTL RLLVPGDGVPRVDAVVFLLRTLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMLSAKDVATRFTEEMDR TGICQAVVPVSGLLALTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSPLPIDAATRAALLDRFGMFGVRISI AVLRAGVKDSVALADELLERSGLVALRDVIDQQFAQRSDLLKAHTALLSLRQFVQLNPIYATPYIIADIDPLLADTHAFE ELRLLSQLRSRTTTLTDDEMASLRRLIGGSGTDAASRLGLQPEDPYDGPRAAFAAAQRWRRRAEHPLNDPFTARACRAAV RSAEALVAAYAAKGRSYRDGPA
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001401 [H]
Pfam domain/function: PF00350 Dynamin_N [H]
EC number: NA
Molecular weight: Translated: 54089; Mature: 54089
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILGGTIAAYRDDPAYRQRPEVHNELERIGARLNQPIRIALAGTLKAGKSTLVNALVG CCCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC EEIAPTDATEATRIVTWFRHGPTPKVTANHRGGRRSNVPIARRSSGPADERGLTFDLARL CCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECC DPDDVLDLDVEWPAAELIDSTIIDTPGTSSLSRDVSERTLRLLVPGDGVPRVDAVVFLLR CCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHH TLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMLSAKDVATRFTEEMDR HCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHH TGICQAVVPVSGLLALTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSPLPID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC AATRAALLDRFGMFGVRISIAVLRAGVKDSVALADELLERSGLVALRDVIDQQFAQRSDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LKAHTALLSLRQFVQLNPIYATPYIIADIDPLLADTHAFEELRLLSQLRSRTTTLTDDEM HHHHHHHHHHHHHHHCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ASLRRLIGGSGTDAASRLGLQPEDPYDGPRAAFAAAQRWRRRAEHPLNDPFTARACRAAV HHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RSAEALVAAYAAKGRSYRDGPA HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRAILGGTIAAYRDDPAYRQRPEVHNELERIGARLNQPIRIALAGTLKAGKSTLVNALVG CCCCCCCCCEEECCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC EEIAPTDATEATRIVTWFRHGPTPKVTANHRGGRRSNVPIARRSSGPADERGLTFDLARL CCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECC DPDDVLDLDVEWPAAELIDSTIIDTPGTSSLSRDVSERTLRLLVPGDGVPRVDAVVFLLR CCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHH TLNAADIALLKQIGELVGGSSGALGVIGVASRADEIGAGRIDAMLSAKDVATRFTEEMDR HCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHH TGICQAVVPVSGLLALTARTLRQSEFVALEKLAGVDPAELAKAMLSVDRFVREDSPLPID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC AATRAALLDRFGMFGVRISIAVLRAGVKDSVALADELLERSGLVALRDVIDQQFAQRSDL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LKAHTALLSLRQFVQLNPIYATPYIIADIDPLLADTHAFEELRLLSQLRSRTTTLTDDEM HHHHHHHHHHHHHHHCCCCEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH ASLRRLIGGSGTDAASRLGLQPEDPYDGPRAAFAAAQRWRRRAEHPLNDPFTARACRAAV HHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RSAEALVAAYAAKGRSYRDGPA HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]