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The map label for this gene is dcd [H]

Identifier: 108797410

GI number: 108797410

Start: 477649

End: 478221

Strand: Direct

Name: dcd [H]

Synonym: Mmcs_0430

Alternate gene names: 108797410

Gene position: 477649-478221 (Clockwise)

Preceding gene: 108797409

Following gene: 108797411

Centisome position: 8.37

GC content: 65.97

Gene sequence:

>573_bases
GTGCTGCTCTCCGATCGTGATATCCGCGCCGAGATCGACGCCGGACGGCTGGGCATCGATCCGTTCGAAGACAGCCTGGT
GCAGCCGTCGAGCGTCGACGTCCGCCTCGACACCCTGTTCCGGGTCTTCAACAACACCCGCTACACCCACATCGACCCGG
CCAAGCAGCAGGACGAACTGACCAGCCTCGTCGAACCGTCGCCTGGTGAGCCGTTCGTCCTGCATCCCGGTGAGTTCGTG
CTCGGCTCGACGCTCGAGACGTGCACCCTGCCCGACGACCTGGCCGGCCGGCTCGAGGGCAAATCGTCGCTCGGGCGCCT
CGGCCTGCTGACCCATTCGACGGCCGGTTTCATCGACCCCGGGTTCAGCGGCCACATCACCCTCGAACTCTCCAACGTCG
CCAACCTGCCGATCACACTGTGGCCCGGCATGAAGATCGGCCAGCTCTGCCTGCTGCGCCTGACCAGCCCGGCCGAACAC
CCCTACGGCAGCGCCAAGGTCGGCTCGAAATACCAGGGTCAACGCGGGCCGACACCCTCGCGGTCCTACCAGAACTTCAT
CAAGCTGAGCTGA

Upstream 100 bases:

>100_bases
CAGCTTGGGAAGCTGATGTTCTGCCATTGAACTACATCGGCCTTGCCAGCTCACGCTGGTGATCACGGAGATTATCACTC
CGAGCCGATAGTCTCGTCGG

Downstream 100 bases:

>100_bases
GTCTGTTCGGCCCTGCGCCAGGGTGCCGATGCGCGAGAAGACACCGCGCCACGTTCGTGACCGCACGGCGGAGATTGGCC
CGAAACTTCGCCACCTGGTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MLLSDRDIRAEIDAGRLGIDPFEDSLVQPSSVDVRLDTLFRVFNNTRYTHIDPAKQQDELTSLVEPSPGEPFVLHPGEFV
LGSTLETCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEH
PYGSAKVGSKYQGQRGPTPSRSYQNFIKLS

Sequences:

>Translated_190_residues
MLLSDRDIRAEIDAGRLGIDPFEDSLVQPSSVDVRLDTLFRVFNNTRYTHIDPAKQQDELTSLVEPSPGEPFVLHPGEFV
LGSTLETCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEH
PYGSAKVGSKYQGQRGPTPSRSYQNFIKLS
>Mature_190_residues
MLLSDRDIRAEIDAGRLGIDPFEDSLVQPSSVDVRLDTLFRVFNNTRYTHIDPAKQQDELTSLVEPSPGEPFVLHPGEFV
LGSTLETCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEH
PYGSAKVGSKYQGQRGPTPSRSYQNFIKLS

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=190, Percent_Identity=44.7368421052632, Blast_Score=143, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 20716; Mature: 20716

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSDRDIRAEIDAGRLGIDPFEDSLVQPSSVDVRLDTLFRVFNNTRYTHIDPAKQQDEL
CCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHH
TSLVEPSPGEPFVLHPGEFVLGSTLETCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDP
HHHCCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCC
GFSGHITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEHPYGSAKVGSKYQGQRGPTPS
CCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYQNFIKLS
CCHHHHEECC
>Mature Secondary Structure
MLLSDRDIRAEIDAGRLGIDPFEDSLVQPSSVDVRLDTLFRVFNNTRYTHIDPAKQQDEL
CCCCCCCCEEEECCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCHHHHHH
TSLVEPSPGEPFVLHPGEFVLGSTLETCTLPDDLAGRLEGKSSLGRLGLLTHSTAGFIDP
HHHCCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCC
GFSGHITLELSNVANLPITLWPGMKIGQLCLLRLTSPAEHPYGSAKVGSKYQGQRGPTPS
CCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
RSYQNFIKLS
CCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA