Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108797409

Identifier: 108797409

GI number: 108797409

Start: 476849

End: 477505

Strand: Direct

Name: 108797409

Synonym: Mmcs_0429

Alternate gene names: NA

Gene position: 476849-477505 (Clockwise)

Preceding gene: 108797408

Following gene: 108797410

Centisome position: 8.36

GC content: 68.49

Gene sequence:

>657_bases
ATGCGGGGGGCGCAGCCCAGTACTCACCTGGTACTGATCCGCCCGAGCGGCAGCGGCACCCGAGGATCCCTTTGTCACCT
TCCTGAACGTGTTGCGCCCGGGACAGCCGGATTCCCGCCGACGACCAACCGCGTCTACCCACTGGTGAATGCGACGGGGA
CCGTCCTGGTGACCGATGTAATCGGCACCGGTGCACCCGGTGATCCGTTGTCCACCATCCTCACCCTCTGCCGTCCTGGC
GAGATGCCCGTCGTGGTCGAGATCCCCGGTCCGCCCGTGGGTAAGGGCCTCGGCGCCGACGGCACGGTGACCTACGCGGC
ATCCACCGCTTCGGGCTCGACGTTCACGGTGCTCCGTCCCGGTCAACCCGCCGTCACCATCAGCACTCCCGGTCTGGTCT
CCAACGGGCCGGTGGTCGGGCCCGACGGCACGCTCTACCAGGTGACCGACGATCGCGTCTCGGGACGCACGAACCTGACG
ATCGTGACCGCCGCCGGGGAGGTGACCAGGTTGGACTTCGCCGGCAGCAGCCCGAGTCTGGCGATCGATCCGGACGGCGG
CAAGGTCGTCCTCGTGATGACGACCCGCGAGGGAGGGATCGAGACGCGCACCGGCTATGAGATTGCGGTCGTGACGGGCG
CCGCGTCGTCGGTCTAG

Upstream 100 bases:

>100_bases
CAACCGGGCGCGGTGCTGTACGCCGACGTCAACGTCGGTGTCGGCACGAAATGACCCCACTGGTGGGTCGCGGCTGGCTA
CACGCTCACTGTGCCCGGCG

Downstream 100 bases:

>100_bases
CTGTTCGACGTGGAGCCGATGACGGGAATCGAACCCGCGTATTCAGCTTGGGAAGCTGATGTTCTGCCATTGAACTACAT
CGGCCTTGCCAGCTCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MRGAQPSTHLVLIRPSGSGTRGSLCHLPERVAPGTAGFPPTTNRVYPLVNATGTVLVTDVIGTGAPGDPLSTILTLCRPG
EMPVVVEIPGPPVGKGLGADGTVTYAASTASGSTFTVLRPGQPAVTISTPGLVSNGPVVGPDGTLYQVTDDRVSGRTNLT
IVTAAGEVTRLDFAGSSPSLAIDPDGGKVVLVMTTREGGIETRTGYEIAVVTGAASSV

Sequences:

>Translated_218_residues
MRGAQPSTHLVLIRPSGSGTRGSLCHLPERVAPGTAGFPPTTNRVYPLVNATGTVLVTDVIGTGAPGDPLSTILTLCRPG
EMPVVVEIPGPPVGKGLGADGTVTYAASTASGSTFTVLRPGQPAVTISTPGLVSNGPVVGPDGTLYQVTDDRVSGRTNLT
IVTAAGEVTRLDFAGSSPSLAIDPDGGKVVLVMTTREGGIETRTGYEIAVVTGAASSV
>Mature_218_residues
MRGAQPSTHLVLIRPSGSGTRGSLCHLPERVAPGTAGFPPTTNRVYPLVNATGTVLVTDVIGTGAPGDPLSTILTLCRPG
EMPVVVEIPGPPVGKGLGADGTVTYAASTASGSTFTVLRPGQPAVTISTPGLVSNGPVVGPDGTLYQVTDDRVSGRTNLT
IVTAAGEVTRLDFAGSSPSLAIDPDGGKVVLVMTTREGGIETRTGYEIAVVTGAASSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21858; Mature: 21858

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGAQPSTHLVLIRPSGSGTRGSLCHLPERVAPGTAGFPPTTNRVYPLVNATGTVLVTDV
CCCCCCCCEEEEEEECCCCCCCCEECCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEE
IGTGAPGDPLSTILTLCRPGEMPVVVEIPGPPVGKGLGADGTVTYAASTASGSTFTVLRP
CCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECC
GQPAVTISTPGLVSNGPVVGPDGTLYQVTDDRVSGRTNLTIVTAAGEVTRLDFAGSSPSL
CCCEEEEECCCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCE
AIDPDGGKVVLVMTTREGGIETRTGYEIAVVTGAASSV
EECCCCCEEEEEEEECCCCCEECCCEEEEEEECCCCCC
>Mature Secondary Structure
MRGAQPSTHLVLIRPSGSGTRGSLCHLPERVAPGTAGFPPTTNRVYPLVNATGTVLVTDV
CCCCCCCCEEEEEEECCCCCCCCEECCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEEE
IGTGAPGDPLSTILTLCRPGEMPVVVEIPGPPVGKGLGADGTVTYAASTASGSTFTVLRP
CCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEECC
GQPAVTISTPGLVSNGPVVGPDGTLYQVTDDRVSGRTNLTIVTAAGEVTRLDFAGSSPSL
CCCEEEEECCCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCE
AIDPDGGKVVLVMTTREGGIETRTGYEIAVVTGAASSV
EECCCCCEEEEEEEECCCCCEECCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA