| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797395
Identifier: 108797395
GI number: 108797395
Start: 462210
End: 463064
Strand: Direct
Name: 108797395
Synonym: Mmcs_0415
Alternate gene names: NA
Gene position: 462210-463064 (Clockwise)
Preceding gene: 108797394
Following gene: 108797396
Centisome position: 8.1
GC content: 60.58
Gene sequence:
>855_bases ATGTCGTCAACGAGCCGTGTTGGAATTTCTTCACTATTCGCTTGTGCGCTCCTCTTCGGATCTACGGCGGTGACGCCGGA CATATCGCAGGCGCAACCCGGACCGGGCGGGGCAACCGTGCTTACCCTCGCGCCGGCGTTCAACGAATTGAAGTCCAATT GGCTGCGTGGTGAATTGTTCGCCGCACCGAATGTGAAGGTCAAGGTCCCGTACACGAACATCCCGAGTGCCACGAACACG CACAAGGGCGCCGACAAACTCAACGAGATGCTGCACGCCTATCCGGGCCCCAAGATCGTGGCCGGGCACAGCCAGGGTGC GCAGGTGGCCGACGACTGGCTGCGCCGTTACGGACCGACCAGCGACATCGACCCGGCGACTGTGCAATTCGTTCTGACGG GTGATCTGGAGAGCAAGTACAACGGATGCGCGAATGTTCCGGGCAGCGGTTGTGTGGCCGCCTACGGGGGAAACAATTTC CCCGATGACACCCCGTACACGGTGAAAGTGATCGCCCGTCAATACGACTATTTCGCGGACTGCCCCAACGACCTGTCGAA TGAAACCGCGAAGAAGAACCGCAATGCGTCACAGGTCGTCGGCGGTAAGGGTGAACTCAACAGCGTGCACACGAATTACA GCAACATCGGTTTGAACGATCCCGGCAACAAGACCTTCGTCGAGGGGAATGCGACGTACATCCTCGGCGCACCGGCGACC TATTTCCTGCCGGTGGTCACGCAGAAGTGGACGTCGAACGAATCCAAGGTGGTGGAGGACGCCGAGCTGCGTCCCATCGT GGAATCGGCCTACAACCGACCGATGGGAGCGCCGCCCGCACCACCGGCACCGTGA
Upstream 100 bases:
>100_bases CGGCATCGTTTCGATGCCGGCTCGGCATCGCGCACGCATATTCGCTGCGCCGAACGCTATACAGACTCCGCACCGCAAAC ACCGCGAGAAGGGTCGGGGA
Downstream 100 bases:
>100_bases ACCAGAAGAGCAATCACGGCCCATCGGCGGGTTTGGCCCCCGAAACCGGCGCCGCTCCGTTTACGGTTTGGGAGTGCCAA ACATGGATCGTCGGAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSSTSRVGISSLFACALLFGSTAVTPDISQAQPGPGGATVLTLAPAFNELKSNWLRGELFAAPNVKVKVPYTNIPSATNT HKGADKLNEMLHAYPGPKIVAGHSQGAQVADDWLRRYGPTSDIDPATVQFVLTGDLESKYNGCANVPGSGCVAAYGGNNF PDDTPYTVKVIARQYDYFADCPNDLSNETAKKNRNASQVVGGKGELNSVHTNYSNIGLNDPGNKTFVEGNATYILGAPAT YFLPVVTQKWTSNESKVVEDAELRPIVESAYNRPMGAPPAPPAP
Sequences:
>Translated_284_residues MSSTSRVGISSLFACALLFGSTAVTPDISQAQPGPGGATVLTLAPAFNELKSNWLRGELFAAPNVKVKVPYTNIPSATNT HKGADKLNEMLHAYPGPKIVAGHSQGAQVADDWLRRYGPTSDIDPATVQFVLTGDLESKYNGCANVPGSGCVAAYGGNNF PDDTPYTVKVIARQYDYFADCPNDLSNETAKKNRNASQVVGGKGELNSVHTNYSNIGLNDPGNKTFVEGNATYILGAPAT YFLPVVTQKWTSNESKVVEDAELRPIVESAYNRPMGAPPAPPAP >Mature_283_residues SSTSRVGISSLFACALLFGSTAVTPDISQAQPGPGGATVLTLAPAFNELKSNWLRGELFAAPNVKVKVPYTNIPSATNTH KGADKLNEMLHAYPGPKIVAGHSQGAQVADDWLRRYGPTSDIDPATVQFVLTGDLESKYNGCANVPGSGCVAAYGGNNFP DDTPYTVKVIARQYDYFADCPNDLSNETAKKNRNASQVVGGKGELNSVHTNYSNIGLNDPGNKTFVEGNATYILGAPATY FLPVVTQKWTSNESKVVEDAELRPIVESAYNRPMGAPPAPPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30095; Mature: 29964
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTSRVGISSLFACALLFGSTAVTPDISQAQPGPGGATVLTLAPAFNELKSNWLRGELF CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHCCCCEEE AAPNVKVKVPYTNIPSATNTHKGADKLNEMLHAYPGPKIVAGHSQGAQVADDWLRRYGPT ECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCC SDIDPATVQFVLTGDLESKYNGCANVPGSGCVAAYGGNNFPDDTPYTVKVIARQYDYFAD CCCCCCEEEEEEECCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHC CPNDLSNETAKKNRNASQVVGGKGELNSVHTNYSNIGLNDPGNKTFVEGNATYILGAPAT CCCHHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCEEEEEECCHH YFLPVVTQKWTSNESKVVEDAELRPIVESAYNRPMGAPPAPPAP HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SSTSRVGISSLFACALLFGSTAVTPDISQAQPGPGGATVLTLAPAFNELKSNWLRGELF CCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHCCCCEEE AAPNVKVKVPYTNIPSATNTHKGADKLNEMLHAYPGPKIVAGHSQGAQVADDWLRRYGPT ECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCC SDIDPATVQFVLTGDLESKYNGCANVPGSGCVAAYGGNNFPDDTPYTVKVIARQYDYFAD CCCCCCEEEEEEECCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHC CPNDLSNETAKKNRNASQVVGGKGELNSVHTNYSNIGLNDPGNKTFVEGNATYILGAPAT CCCHHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCEEEECCEEEEEECCHH YFLPVVTQKWTSNESKVVEDAELRPIVESAYNRPMGAPPAPPAP HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA