Click here to switch to the map view.

The map label for this gene is glcA [H]

Identifier: 108797396

GI number: 108797396

Start: 463147

End: 463998

Strand: Direct

Name: glcA [H]

Synonym: Mmcs_0416

Alternate gene names: 108797396

Gene position: 463147-463998 (Clockwise)

Preceding gene: 108797395

Following gene: 108797402

Centisome position: 8.12

GC content: 67.14

Gene sequence:

>852_bases
ATGGATCGTCGGAGTGCAATGTTGATGTTCGGGGTCGGTGTGGCGGCTGCCGCGCTACCGGTTGCCAAGGCCGGTGCCCA
ACCGGTGATCGGTGATACGCCGCCCGGACCGGGTGTTCCCGAGGCCGGCGTACCCGGTCTCCTGTTCTCAGACGAGTTCA
ACGGACCGGCAGGGGCGCCGCCGAACCCCGCGTCGTGGTTCATCGTCCCGGCCAGGGAGACCATCCGGAACCCCGTCGAA
TGGGACAAGCCCTTCAACATGGGCCGCTACGTCACCGATCAGGAGCACGTCTTCCAGGACGGGGCGGGCAACCTGGTCAT
CCGGGCCACCCGCGGCCCCGGTGCGAACATCCAGGAGAAGTACGCCAGCGGGAAGGTCATCGGCAACTGGCGCGGCGGTG
TCGGGACGACGTGGGAAGCCCGCATCAAGCTCAACTGTCTGACCGACGGCGCGTGGCCGGCGTTCTGGTTGATCAACGAC
AACCCGGTGCGCGGCGGCGAGGTCGACCTCGTGGAGTGGTACGGCAACCGGGACTGGCCCTCGGGCACCACCGTGCACGC
GCGGTTGGACGGCACGCAGTTCCAGACCCACAAACACCCCGTCGACAGTGACTGGCACACCTGGCGGATGACCTGGCAGC
CGCAAGGCATGTACTTCTGGAAGGACTACCAGCCGGGGATGGAGCCGTTCTTCACCGTGCTGGCGAACTCCCTGCCGGAA
TGGCCGTTCAACGACCCCGGCTACACGATGGCCCCGGTCTTCAACATCGCCGTCGGCGGCTCCGGCGGTCGCGAGCCGGC
CGGCGGCAACTACCCCGCGGAGATGCTGATCGACTGGATCCGGGTCTTCTAA

Upstream 100 bases:

>100_bases
GCACCACCGGCACCGTGAACCAGAAGAGCAATCACGGCCCATCGGCGGGTTTGGCCCCCGAAACCGGCGCCGCTCCGTTT
ACGGTTTGGGAGTGCCAAAC

Downstream 100 bases:

>100_bases
CAGCAGCGTTCGAACCAGCATCGGAGTCTCATGTCGAACTACGGCCCGCCGGATGACCGCGGCTACTACTCCGACCCTCC
GGACGGGTACGGCGGGCAGC

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: (1->3)-beta-glucan endohydrolase; (1->3)-beta-glucanase A1 [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MDRRSAMLMFGVGVAAAALPVAKAGAQPVIGDTPPGPGVPEAGVPGLLFSDEFNGPAGAPPNPASWFIVPARETIRNPVE
WDKPFNMGRYVTDQEHVFQDGAGNLVIRATRGPGANIQEKYASGKVIGNWRGGVGTTWEARIKLNCLTDGAWPAFWLIND
NPVRGGEVDLVEWYGNRDWPSGTTVHARLDGTQFQTHKHPVDSDWHTWRMTWQPQGMYFWKDYQPGMEPFFTVLANSLPE
WPFNDPGYTMAPVFNIAVGGSGGREPAGGNYPAEMLIDWIRVF

Sequences:

>Translated_283_residues
MDRRSAMLMFGVGVAAAALPVAKAGAQPVIGDTPPGPGVPEAGVPGLLFSDEFNGPAGAPPNPASWFIVPARETIRNPVE
WDKPFNMGRYVTDQEHVFQDGAGNLVIRATRGPGANIQEKYASGKVIGNWRGGVGTTWEARIKLNCLTDGAWPAFWLIND
NPVRGGEVDLVEWYGNRDWPSGTTVHARLDGTQFQTHKHPVDSDWHTWRMTWQPQGMYFWKDYQPGMEPFFTVLANSLPE
WPFNDPGYTMAPVFNIAVGGSGGREPAGGNYPAEMLIDWIRVF
>Mature_283_residues
MDRRSAMLMFGVGVAAAALPVAKAGAQPVIGDTPPGPGVPEAGVPGLLFSDEFNGPAGAPPNPASWFIVPARETIRNPVE
WDKPFNMGRYVTDQEHVFQDGAGNLVIRATRGPGANIQEKYASGKVIGNWRGGVGTTWEARIKLNCLTDGAWPAFWLIND
NPVRGGEVDLVEWYGNRDWPSGTTVHARLDGTQFQTHKHPVDSDWHTWRMTWQPQGMYFWKDYQPGMEPFFTVLANSLPE
WPFNDPGYTMAPVFNIAVGGSGGREPAGGNYPAEMLIDWIRVF

Specific function: Lysis of cellular walls containing beta-1,3-glucans. Implicated in the defense against fungal pathogens [H]

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR008263 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: =3.2.1.39 [H]

Molecular weight: Translated: 31096; Mature: 31096

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRSAMLMFGVGVAAAALPVAKAGAQPVIGDTPPGPGVPEAGVPGLLFSDEFNGPAGAP
CCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PNPASWFIVPARETIRNPVEWDKPFNMGRYVTDQEHVFQDGAGNLVIRATRGPGANIQEK
CCCCCEEEEECHHHHCCCCCCCCCCCCCCEECCHHHHHHCCCCCEEEEEECCCCCCHHHH
YASGKVIGNWRGGVGTTWEARIKLNCLTDGAWPAFWLINDNPVRGGEVDLVEWYGNRDWP
HCCCCEEEECCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCC
SGTTVHARLDGTQFQTHKHPVDSDWHTWRMTWQPQGMYFWKDYQPGMEPFFTVLANSLPE
CCCEEEEEECCCEEECCCCCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCC
WPFNDPGYTMAPVFNIAVGGSGGREPAGGNYPAEMLIDWIRVF
CCCCCCCEEECEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MDRRSAMLMFGVGVAAAALPVAKAGAQPVIGDTPPGPGVPEAGVPGLLFSDEFNGPAGAP
CCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PNPASWFIVPARETIRNPVEWDKPFNMGRYVTDQEHVFQDGAGNLVIRATRGPGANIQEK
CCCCCEEEEECHHHHCCCCCCCCCCCCCCEECCHHHHHHCCCCCEEEEEECCCCCCHHHH
YASGKVIGNWRGGVGTTWEARIKLNCLTDGAWPAFWLINDNPVRGGEVDLVEWYGNRDWP
HCCCCEEEECCCCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCCCCC
SGTTVHARLDGTQFQTHKHPVDSDWHTWRMTWQPQGMYFWKDYQPGMEPFFTVLANSLPE
CCCEEEEEECCCEEECCCCCCCCCCEEEEEEEECCCEEEEECCCCCHHHHHHHHHHHCCC
WPFNDPGYTMAPVFNIAVGGSGGREPAGGNYPAEMLIDWIRVF
CCCCCCCEEECEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2311931 [H]