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The map label for this gene is ybfF [C]

Identifier: 108797383

GI number: 108797383

Start: 450072

End: 450947

Strand: Direct

Name: ybfF [C]

Synonym: Mmcs_0403

Alternate gene names: 108797383

Gene position: 450072-450947 (Clockwise)

Preceding gene: 108797382

Following gene: 108797384

Centisome position: 7.89

GC content: 69.63

Gene sequence:

>876_bases
ATGAATGACGTCGAATATGTCGAACTGCACGGCGAGCGTGTCGCGTACCGGGATGCGGGCAGCGGCGAGGTTCTGCTGCT
CATCCACGGCATGGCCGGCTGCTCGGACACCTGGAACGCGGTCCTGCCCCGGCTGGCCGAGAACTACCGAGTGATCGCCC
CCGACCTGCTCGGACACGGCCGCTCGGCCAAACCGCGCACCGACTATTCGCTGGGTGCGTTCGCCGCCGGCCTGCGGGAT
CTGCTCGACGAGTTGGGGGTCGACCGGGCCACGATCGTCGGTCAGTCCCTCGGTGGCGGCGTCGCGATGCAATTCATGTA
CCAGCACCCGCAGTACTGCCGGCGGCTGATCCTGATCAGCAGCGGTGGCCTCGGACCCGATGTGGGGTGGGTCCTGCGAT
TGCTGGCGGCGCCGGGAGCCGAGGTCCTGTTACCGGTCGTCGCGCCCAAGCCGGTGGTCGCCCTCGGCAACCGGTTACGG
CCCGTCCTGGGGGCGCTGGGCCTCGGCTCGCCACAGGCCGCGCAGACGTGGCAGTCCTACAGTTCGCTGTCCGATCCGCC
CACGCGGGCGGCGTTCCAGCGCACGCTGCGATCGGTGGTGGATCACCGCGGTCAGTCGGTCAGTGCGCTGAGCCGCCTCG
GGATGCACCTCGAGGTGCCCAGCCTGGTGATCTGGGGAGACCGGGACCCGATCATCCCCGTCGCACACGCCTACTCGGTG
CAGGCGGCCAGACCGGGCAGCGCGCTGAAGGTGTTACCGGGTGTCGGGCACTACCCCCACGTCGAGGCCCCGGACGAGGT
CGTCGACGCCATCCGGCAGTTCTTCCTGGACACCGCCGCCGATGATCCCCACCACCACCCGGGCGCGGTGACATAG

Upstream 100 bases:

>100_bases
ACCGGCTCGCACTGCCCGACGGTGATGACGGTCACCGGGGCGTTTCCGCGACACGCAAGCGGTGAACCCAGACGACTGAC
CGCAATCGGAAGAGTTGTCG

Downstream 100 bases:

>100_bases
CGTCGGACCCAAACCCTGCGTTCTTTCGACAGCGGTTCACAGGTTTGCTTAAGGTTGACCCGGGGTTGGGGCGAACCAGC
GGGGTGGATATGGGTGCGGG

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MNDVEYVELHGERVAYRDAGSGEVLLLIHGMAGCSDTWNAVLPRLAENYRVIAPDLLGHGRSAKPRTDYSLGAFAAGLRD
LLDELGVDRATIVGQSLGGGVAMQFMYQHPQYCRRLILISSGGLGPDVGWVLRLLAAPGAEVLLPVVAPKPVVALGNRLR
PVLGALGLGSPQAAQTWQSYSSLSDPPTRAAFQRTLRSVVDHRGQSVSALSRLGMHLEVPSLVIWGDRDPIIPVAHAYSV
QAARPGSALKVLPGVGHYPHVEAPDEVVDAIRQFFLDTAADDPHHHPGAVT

Sequences:

>Translated_291_residues
MNDVEYVELHGERVAYRDAGSGEVLLLIHGMAGCSDTWNAVLPRLAENYRVIAPDLLGHGRSAKPRTDYSLGAFAAGLRD
LLDELGVDRATIVGQSLGGGVAMQFMYQHPQYCRRLILISSGGLGPDVGWVLRLLAAPGAEVLLPVVAPKPVVALGNRLR
PVLGALGLGSPQAAQTWQSYSSLSDPPTRAAFQRTLRSVVDHRGQSVSALSRLGMHLEVPSLVIWGDRDPIIPVAHAYSV
QAARPGSALKVLPGVGHYPHVEAPDEVVDAIRQFFLDTAADDPHHHPGAVT
>Mature_291_residues
MNDVEYVELHGERVAYRDAGSGEVLLLIHGMAGCSDTWNAVLPRLAENYRVIAPDLLGHGRSAKPRTDYSLGAFAAGLRD
LLDELGVDRATIVGQSLGGGVAMQFMYQHPQYCRRLILISSGGLGPDVGWVLRLLAAPGAEVLLPVVAPKPVVALGNRLR
PVLGALGLGSPQAAQTWQSYSSLSDPPTRAAFQRTLRSVVDHRGQSVSALSRLGMHLEVPSLVIWGDRDPIIPVAHAYSV
QAARPGSALKVLPGVGHYPHVEAPDEVVDAIRQFFLDTAADDPHHHPGAVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI31542303, Length=257, Percent_Identity=26.4591439688716, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI23200012, Length=261, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI23200008, Length=261, Percent_Identity=24.1379310344828, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17554012, Length=289, Percent_Identity=22.8373702422145, Blast_Score=91, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 31092; Mature: 31092

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVEYVELHGERVAYRDAGSGEVLLLIHGMAGCSDTWNAVLPRLAENYRVIAPDLLGHG
CCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEHHHHCCC
RSAKPRTDYSLGAFAAGLRDLLDELGVDRATIVGQSLGGGVAMQFMYQHPQYCRRLILIS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCHHHHHHEEEEE
SGGLGPDVGWVLRLLAAPGAEVLLPVVAPKPVVALGNRLRPVLGALGLGSPQAAQTWQSY
CCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SSLSDPPTRAAFQRTLRSVVDHRGQSVSALSRLGMHLEVPSLVIWGDRDPIIPVAHAYSV
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCEEEEECCCCCCCEEHHHEEE
QAARPGSALKVLPGVGHYPHVEAPDEVVDAIRQFFLDTAADDPHHHPGAVT
CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNDVEYVELHGERVAYRDAGSGEVLLLIHGMAGCSDTWNAVLPRLAENYRVIAPDLLGHG
CCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEHHHHCCC
RSAKPRTDYSLGAFAAGLRDLLDELGVDRATIVGQSLGGGVAMQFMYQHPQYCRRLILIS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCHHHHHHEEEEE
SGGLGPDVGWVLRLLAAPGAEVLLPVVAPKPVVALGNRLRPVLGALGLGSPQAAQTWQSY
CCCCCCCHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SSLSDPPTRAAFQRTLRSVVDHRGQSVSALSRLGMHLEVPSLVIWGDRDPIIPVAHAYSV
HHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCEEEEECCCCCCCEEHHHEEE
QAARPGSALKVLPGVGHYPHVEAPDEVVDAIRQFFLDTAADDPHHHPGAVT
CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]