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The map label for this gene is desA3 [H]

Identifier: 108797382

GI number: 108797382

Start: 448930

End: 450036

Strand: Direct

Name: desA3 [H]

Synonym: Mmcs_0402

Alternate gene names: 108797382

Gene position: 448930-450036 (Clockwise)

Preceding gene: 108797381

Following gene: 108797383

Centisome position: 7.87

GC content: 65.04

Gene sequence:

>1107_bases
ATGGCCATCACAGACGTCGCGCAGTACGCGCATCTGAGCAACACCGACATCGAATCGCTCGGTGCCGAACTCGACACGAT
CCGCCGCGACATCGAAGAATCCCTCGGCGCCCGCGACGCCGCCTACATCCGTCGCACCATCGCCTTCCAACGGGCGCTCG
ACGTCGGCGCCCGGCTGCTCATCGCCGCCGGCAGCGGCAAGACCGCCTGGATCGCCGGAACCGCGGCGCTGGCGTTCGCC
AAGACCGTGGAGAACATGGAGATCGGCCACAACGTCGGGCACGGCCAGTGGGACTGGATGAACGACCCCGAGATCCACTC
GAACACGTGGGAATGGGATATGGCCGGGCCGTCGTCGCAGTGGCGGTACTCCCACAACTACCTCCACCACGTGTTCACCA
ACGTCATCGACATGGACGAAGACCTGGGTTTCGGCGTGATGCGGGTGACCCGCGACCAGCCGTGGGAGCCGCGTTACCTG
CTTCAGCCACTGCGCAACATCGCCCTGGCGATCGGATTCGAATGGGGTATCGCGCTCCATGACATCCACGCCGCCAAGGA
GCGCGCACAAACCCCGGGTGAGAAACACGCGCAGTCACGCCTGATCCGGAAGAAGATCGCCCGCCAGATGGTCAAGGATT
ACCTGATCTTCCCGGCGCTGAGCCGGTCACGCTGGCGCCGGACACTGGGCGCCAACGTCGCCGCGAACATCGTGCGCAAT
CTCTGGGCGTACGTGGTGATCTTCTGCGGCCACTTCCCCGACGGTGCGGAGAAGTTCACCGCCGCGGTGCTCGAGCAGGA
GAGCAAGCCGGAGTGGTATCTGCGCCAGATGCTGGGCACCGCGAACTTCAACGCCGGACCACTGATGGCATTCGCCAGCG
GGAACCTGTGCTACCAGATCGAGCACCACCTGTTCCCGGATCTCCCCAGCAACCGGTACGCGCAGATCGCCGTACGCGTG
CGGGCACAATGTGAGAAGTTCGATCTGCCGTACACCACCGGGTCGCTGATGCGCCAGTACTGGCAGACGCTGCGCACCAT
CCACCGGCTCGCACTGCCCGACGGTGATGACGGTCACCGGGGCGTTTCCGCGACACGCAAGCGGTGA

Upstream 100 bases:

>100_bases
TTCAGGTACCCAGACAGCGTGGCGCCGCTCGTAGCAGCTCTTCACAGTCACTCGCCCGATCGCCCTCGCGGCGACTGACC
GTTCGTTTCGAGGACCCTCG

Downstream 100 bases:

>100_bases
ACCCAGACGACTGACCGCAATCGGAAGAGTTGTCGATGAATGACGTCGAATATGTCGAACTGCACGGCGAGCGTGTCGCG
TACCGGGATGCGGGCAGCGG

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MAITDVAQYAHLSNTDIESLGAELDTIRRDIEESLGARDAAYIRRTIAFQRALDVGARLLIAAGSGKTAWIAGTAALAFA
KTVENMEIGHNVGHGQWDWMNDPEIHSNTWEWDMAGPSSQWRYSHNYLHHVFTNVIDMDEDLGFGVMRVTRDQPWEPRYL
LQPLRNIALAIGFEWGIALHDIHAAKERAQTPGEKHAQSRLIRKKIARQMVKDYLIFPALSRSRWRRTLGANVAANIVRN
LWAYVVIFCGHFPDGAEKFTAAVLEQESKPEWYLRQMLGTANFNAGPLMAFASGNLCYQIEHHLFPDLPSNRYAQIAVRV
RAQCEKFDLPYTTGSLMRQYWQTLRTIHRLALPDGDDGHRGVSATRKR

Sequences:

>Translated_368_residues
MAITDVAQYAHLSNTDIESLGAELDTIRRDIEESLGARDAAYIRRTIAFQRALDVGARLLIAAGSGKTAWIAGTAALAFA
KTVENMEIGHNVGHGQWDWMNDPEIHSNTWEWDMAGPSSQWRYSHNYLHHVFTNVIDMDEDLGFGVMRVTRDQPWEPRYL
LQPLRNIALAIGFEWGIALHDIHAAKERAQTPGEKHAQSRLIRKKIARQMVKDYLIFPALSRSRWRRTLGANVAANIVRN
LWAYVVIFCGHFPDGAEKFTAAVLEQESKPEWYLRQMLGTANFNAGPLMAFASGNLCYQIEHHLFPDLPSNRYAQIAVRV
RAQCEKFDLPYTTGSLMRQYWQTLRTIHRLALPDGDDGHRGVSATRKR
>Mature_367_residues
AITDVAQYAHLSNTDIESLGAELDTIRRDIEESLGARDAAYIRRTIAFQRALDVGARLLIAAGSGKTAWIAGTAALAFAK
TVENMEIGHNVGHGQWDWMNDPEIHSNTWEWDMAGPSSQWRYSHNYLHHVFTNVIDMDEDLGFGVMRVTRDQPWEPRYLL
QPLRNIALAIGFEWGIALHDIHAAKERAQTPGEKHAQSRLIRKKIARQMVKDYLIFPALSRSRWRRTLGANVAANIVRNL
WAYVVIFCGHFPDGAEKFTAAVLEQESKPEWYLRQMLGTANFNAGPLMAFASGNLCYQIEHHLFPDLPSNRYAQIAVRVR
AQCEKFDLPYTTGSLMRQYWQTLRTIHRLALPDGDDGHRGVSATRKR

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 41823; Mature: 41692

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITDVAQYAHLSNTDIESLGAELDTIRRDIEESLGARDAAYIRRTIAFQRALDVGARLL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEE
IAAGSGKTAWIAGTAALAFAKTVENMEIGHNVGHGQWDWMNDPEIHSNTWEWDMAGPSSQ
EEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
WRYSHNYLHHVFTNVIDMDEDLGFGVMRVTRDQPWEPRYLLQPLRNIALAIGFEWGIALH
CCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH
DIHAAKERAQTPGEKHAQSRLIRKKIARQMVKDYLIFPALSRSRWRRTLGANVAANIVRN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LWAYVVIFCGHFPDGAEKFTAAVLEQESKPEWYLRQMLGTANFNAGPLMAFASGNLCYQI
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEEE
EHHLFPDLPSNRYAQIAVRVRAQCEKFDLPYTTGSLMRQYWQTLRTIHRLALPDGDDGHR
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GVSATRKR
CCCCCCCC
>Mature Secondary Structure 
AITDVAQYAHLSNTDIESLGAELDTIRRDIEESLGARDAAYIRRTIAFQRALDVGARLL
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEE
IAAGSGKTAWIAGTAALAFAKTVENMEIGHNVGHGQWDWMNDPEIHSNTWEWDMAGPSSQ
EEECCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
WRYSHNYLHHVFTNVIDMDEDLGFGVMRVTRDQPWEPRYLLQPLRNIALAIGFEWGIALH
CCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH
DIHAAKERAQTPGEKHAQSRLIRKKIARQMVKDYLIFPALSRSRWRRTLGANVAANIVRN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LWAYVVIFCGHFPDGAEKFTAAVLEQESKPEWYLRQMLGTANFNAGPLMAFASGNLCYQI
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEEE
EHHLFPDLPSNRYAQIAVRVRAQCEKFDLPYTTGSLMRQYWQTLRTIHRLALPDGDDGHR
HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GVSATRKR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]