Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797373
Identifier: 108797373
GI number: 108797373
Start: 439768
End: 440427
Strand: Direct
Name: 108797373
Synonym: Mmcs_0393
Alternate gene names: NA
Gene position: 439768-440427 (Clockwise)
Preceding gene: 108797371
Following gene: 108797375
Centisome position: 7.71
GC content: 69.09
Gene sequence:
>660_bases ATGTCCAACCGGAGGTGGCTGATCGGTTCGGCCGTATCGGCTGCCGCGGTCTTCGTGCTGATGTGGATCGGGTACGCCCA CTGGGCGTGGTTGTTCGAGGCCGATCTGGCCGTCCTCGAACCACTCGACCGCTTCGGCGCCGCCCACCCCGGCTGGGTGA CCGGTTGGGACATCTACTGCACGGTGCTGGGGCCGACGGTGTTACGGCTCGCGGGCGTCGTCGTCATCGTCGTCTCGTTG GTCCGGCGCCAGTACCGAACCGCACTGTTCCTGGTGCTCACCGTCGAGTTGTCGGGGCTGCTCCTGGTGGCTGCCAAGGC GATCGCCGACCGTCCGCGGCCCGCCACCGCACTGGTGGCCGCGCAGTCGACGTCGTTTCCGTCGGGCCACGCGCTGGGTG TGATGGTGTGCGTGCTGGCGTTTCTCGCCGTCCTGTCGCCCACACTGGCGCCGGCGGCACGGCGGTGGGCGATCGCGCTG GGGGTGGTGCTCATCGTGACGATCGGGGTCGCGCGCGTGGTGCTCAACGTCCACCACCCCTCCGACGTGGTGGCCGGGTG GGCGCTGGGTTACGTCTACTTCGTCATGTGCTGGCTGTGGTATCCACCGCGGGTCAGTCCAGCGGCCGAAACACCGGCAG CACCCGGTACTGCGCCGTGA
Upstream 100 bases:
>100_bases ATCTCGTCGGGCAACCTGCCGATACGAAGCAACTTGCGCAGAAAGACGGCCATGTGCAGGCAGCCTAAACCGCTTCGCCG GTGACTGGTAAACAGGCGTG
Downstream 100 bases:
>100_bases AGCTCGCGGTCTGGCACTCGGTGCCGACCTCCCCGTCGCACGCCAGAACGGTCGGGCCGTCGATGGCGGTGAAGGTGAAC TCCGGCACCCGCATCTCGTG
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase Related Protein; Integral Membrane Protein; PAP2 Superfamily Protein
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSNRRWLIGSAVSAAAVFVLMWIGYAHWAWLFEADLAVLEPLDRFGAAHPGWVTGWDIYCTVLGPTVLRLAGVVVIVVSL VRRQYRTALFLVLTVELSGLLLVAAKAIADRPRPATALVAAQSTSFPSGHALGVMVCVLAFLAVLSPTLAPAARRWAIAL GVVLIVTIGVARVVLNVHHPSDVVAGWALGYVYFVMCWLWYPPRVSPAAETPAAPGTAP
Sequences:
>Translated_219_residues MSNRRWLIGSAVSAAAVFVLMWIGYAHWAWLFEADLAVLEPLDRFGAAHPGWVTGWDIYCTVLGPTVLRLAGVVVIVVSL VRRQYRTALFLVLTVELSGLLLVAAKAIADRPRPATALVAAQSTSFPSGHALGVMVCVLAFLAVLSPTLAPAARRWAIAL GVVLIVTIGVARVVLNVHHPSDVVAGWALGYVYFVMCWLWYPPRVSPAAETPAAPGTAP >Mature_218_residues SNRRWLIGSAVSAAAVFVLMWIGYAHWAWLFEADLAVLEPLDRFGAAHPGWVTGWDIYCTVLGPTVLRLAGVVVIVVSLV RRQYRTALFLVLTVELSGLLLVAAKAIADRPRPATALVAAQSTSFPSGHALGVMVCVLAFLAVLSPTLAPAARRWAIALG VVLIVTIGVARVVLNVHHPSDVVAGWALGYVYFVMCWLWYPPRVSPAAETPAAPGTAP
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23431; Mature: 23300
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRRWLIGSAVSAAAVFVLMWIGYAHWAWLFEADLAVLEPLDRFGAAHPGWVTGWDIYC CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH TVLGPTVLRLAGVVVIVVSLVRRQYRTALFLVLTVELSGLLLVAAKAIADRPRPATALVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEE AQSTSFPSGHALGVMVCVLAFLAVLSPTLAPAARRWAIALGVVLIVTIGVARVVLNVHHP ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDVVAGWALGYVYFVMCWLWYPPRVSPAAETPAAPGTAP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNRRWLIGSAVSAAAVFVLMWIGYAHWAWLFEADLAVLEPLDRFGAAHPGWVTGWDIYC CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH TVLGPTVLRLAGVVVIVVSLVRRQYRTALFLVLTVELSGLLLVAAKAIADRPRPATALVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEE AQSTSFPSGHALGVMVCVLAFLAVLSPTLAPAARRWAIALGVVLIVTIGVARVVLNVHHP ECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SDVVAGWALGYVYFVMCWLWYPPRVSPAAETPAAPGTAP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA