Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797371
Identifier: 108797371
GI number: 108797371
Start: 438791
End: 439213
Strand: Direct
Name: 108797371
Synonym: Mmcs_0391
Alternate gene names: NA
Gene position: 438791-439213 (Clockwise)
Preceding gene: 108797366
Following gene: 108797373
Centisome position: 7.69
GC content: 67.38
Gene sequence:
>423_bases ATGGACGAGTTCTCCGCCGAAGTGGTCGCATTCCTGTCCGAGGGCACTCGAACCGGCAAGCTGGGCTATGTCGCATCAGA CGGCAGACCGCTCGTCGCGCCGGTGTGGTTCATCGTCGAGGGCAACCAGCTGGTCTTCAACACCGACCGCGACACCGCGA AGGGGCGTGCGTTGCGGCGCGATCCCCGGGTGGTCCTCTGTGTCGACGATGAACGTCCGCCGTTCTCGTTCGTCCAGGTG CAGGGCCTCGCCTCGACGAGTGAGGATCCCGACGGGCTCCTCGACACGGCGACCCGGATCGGCGGCCGGTACATGGGCGC AGACCGCGCGGAGGAGTTCGGCCGCCGCAACGGTGTACCGGGCGAGTTGGTCGTCCGCATCACTCCGACGAAGGTGGTCG CGGTGTTCGACCTCGCCGACTGA
Upstream 100 bases:
>100_bases TGTCCTGTCACGCTGCCCCACAGAAGCGGTTCTCGGCCCGTTCGGCAAGTGTTCGGCTCACCCGAAGCAACTTATCCCTC GCCGGATCTAACCTCGTCGG
Downstream 100 bases:
>100_bases GCGCAGGGGGCACCCGATGCCGGCCTACGGCCGGTAGGGCACCCCCACCGCACGGAACACCCACTCCGGAGGGACGCTGA TCCGCAGTGACCGGGTCGGC
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: PPOX Class; Pyridoxamine 5-Phosphate Oxidase-Related Protein; Pyridoxal 5-Phosphate Synthase
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDEFSAEVVAFLSEGTRTGKLGYVASDGRPLVAPVWFIVEGNQLVFNTDRDTAKGRALRRDPRVVLCVDDERPPFSFVQV QGLASTSEDPDGLLDTATRIGGRYMGADRAEEFGRRNGVPGELVVRITPTKVVAVFDLAD
Sequences:
>Translated_140_residues MDEFSAEVVAFLSEGTRTGKLGYVASDGRPLVAPVWFIVEGNQLVFNTDRDTAKGRALRRDPRVVLCVDDERPPFSFVQV QGLASTSEDPDGLLDTATRIGGRYMGADRAEEFGRRNGVPGELVVRITPTKVVAVFDLAD >Mature_140_residues MDEFSAEVVAFLSEGTRTGKLGYVASDGRPLVAPVWFIVEGNQLVFNTDRDTAKGRALRRDPRVVLCVDDERPPFSFVQV QGLASTSEDPDGLLDTATRIGGRYMGADRAEEFGRRNGVPGELVVRITPTKVVAVFDLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15259; Mature: 15259
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEFSAEVVAFLSEGTRTGKLGYVASDGRPLVAPVWFIVEGNQLVFNTDRDTAKGRALRR CCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCC DPRVVLCVDDERPPFSFVQVQGLASTSEDPDGLLDTATRIGGRYMGADRAEEFGRRNGVP CCCEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCC GELVVRITPTKVVAVFDLAD CEEEEEECCCEEEEEEEECC >Mature Secondary Structure MDEFSAEVVAFLSEGTRTGKLGYVASDGRPLVAPVWFIVEGNQLVFNTDRDTAKGRALRR CCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCCCCCCC DPRVVLCVDDERPPFSFVQVQGLASTSEDPDGLLDTATRIGGRYMGADRAEEFGRRNGVP CCCEEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCC GELVVRITPTKVVAVFDLAD CEEEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA