Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797365
Identifier: 108797365
GI number: 108797365
Start: 431574
End: 432770
Strand: Reverse
Name: 108797365
Synonym: Mmcs_0385
Alternate gene names: NA
Gene position: 432770-431574 (Counterclockwise)
Preceding gene: 108797367
Following gene: 108797364
Centisome position: 7.59
GC content: 69.09
Gene sequence:
>1197_bases ATGACGCAGTCCGCCGATCCCGTCGACCCGCCCGTCCCCGTGCTGGACATCCCCGGTGCCGACGCCGGTGCGCGCGGTCT GCCGCGGCAGGCCGACCTCACGCTGCGCCAACGCATGATCGTCGACTCGTCGGCCGTCGCGGACATCGCGTTGCGCACCG GCGTCGCCTCGATGGTCGGTGCTGCCATGCTGCCGTCGGTCGTGGCCTCGGCGCTGCGGCCGTCGACCACCGGGGCCGAC GCCGAACACCTGAGGTTCTACGGCGAACTCGCCGCCGCGAAGGACCCTGAGGTGTCCTTCCCGGCGCCGACCGTGCCGCC CCGCATCTCGTCGCGCCCGGCCAACCCGGTCGCCGAGTGGACCGCGCACGGCCGTGTGCACAACATCCGGTTCCGCAGCA GTTTCGAAGCGGTCAACCCGGCACTGCGCGACCGCTGCCACGGATACCGACGCAACAACGTCGTACACGCCCAGCACTGG CGCCACGAGGACGGACCCCGCCCGACGCTGTGCGTCATCCACGGCTTCATGGGCTCGGCCTACCTGTTCAACGGCCAGTT CCTGTCGCTGCCGTGGTTCTACCGCTCCGGTTACGACGTCCTGCTCTACACGCTGCCGTTCCACGGCCGCCGCGCCGAGA AGTACTCGCCCTACAGCGGATACGGCTACTTCGCCAACGGGTTCGCCGGCTTCGCGGAGGCCATGGCCCAGGCCGTCCAC GACTTCCGTTCCCTCATCGACCATCTCGAGTTCACCGGTGTCGACCGGGTCGCCGTCACCGGAATCTCGTTGGGAGGGTT CACCTCGGCGTTGCTCGCCTGCGTCGATGACAGGATCCAGGCGGTCATCCCGAACGTGCCCGTGGTCACCCCGGACCGCA CGGTCGACGAGTGGTTCCCCGCCAACAAACTGGTGGCGCTCAACCGCAGGATCGCCGGGCTGGACCCGGAACTGGAGGCC GCCGCATCGCGTTACCCGTCCCCGCTGAACTACGCACCGCTGGTGCCGCGGGACCGCCGGTTGATCATCACCGGCCTCGG GGACCGGTTGGCGCCGCCGCAACAGGCCGAACTGTTGTGGGAGCACTGGGAGCGGTGCGCCTTCCACTGGTTCCCGGGTA ACCACCTGCTGCACGTCAGCCAGCCCGACTATCTGCGCCGCATGACACGCTTCCTGCGCGACTTCATGTTCGACTGA
Upstream 100 bases:
>100_bases GTGTCCACGGCGCCGACTGTGCCGTCAGGGTGCTGATTCCGCCGATTTCCCGCCCTCAGTACACACTCGGGCGTGCATTC CGAGGGCTAGCATCGGTCGG
Downstream 100 bases:
>100_bases CTGTTCACCGTCGGTTCGCCCGACGCCCGCCCAGCCGCGGGTAGCATCGCTGACCATGTCCGCGGAGTCGCAACCGGTTT CCATCCTGCCGGAGAGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTQSADPVDPPVPVLDIPGADAGARGLPRQADLTLRQRMIVDSSAVADIALRTGVASMVGAAMLPSVVASALRPSTTGAD AEHLRFYGELAAAKDPEVSFPAPTVPPRISSRPANPVAEWTAHGRVHNIRFRSSFEAVNPALRDRCHGYRRNNVVHAQHW RHEDGPRPTLCVIHGFMGSAYLFNGQFLSLPWFYRSGYDVLLYTLPFHGRRAEKYSPYSGYGYFANGFAGFAEAMAQAVH DFRSLIDHLEFTGVDRVAVTGISLGGFTSALLACVDDRIQAVIPNVPVVTPDRTVDEWFPANKLVALNRRIAGLDPELEA AASRYPSPLNYAPLVPRDRRLIITGLGDRLAPPQQAELLWEHWERCAFHWFPGNHLLHVSQPDYLRRMTRFLRDFMFD
Sequences:
>Translated_398_residues MTQSADPVDPPVPVLDIPGADAGARGLPRQADLTLRQRMIVDSSAVADIALRTGVASMVGAAMLPSVVASALRPSTTGAD AEHLRFYGELAAAKDPEVSFPAPTVPPRISSRPANPVAEWTAHGRVHNIRFRSSFEAVNPALRDRCHGYRRNNVVHAQHW RHEDGPRPTLCVIHGFMGSAYLFNGQFLSLPWFYRSGYDVLLYTLPFHGRRAEKYSPYSGYGYFANGFAGFAEAMAQAVH DFRSLIDHLEFTGVDRVAVTGISLGGFTSALLACVDDRIQAVIPNVPVVTPDRTVDEWFPANKLVALNRRIAGLDPELEA AASRYPSPLNYAPLVPRDRRLIITGLGDRLAPPQQAELLWEHWERCAFHWFPGNHLLHVSQPDYLRRMTRFLRDFMFD >Mature_397_residues TQSADPVDPPVPVLDIPGADAGARGLPRQADLTLRQRMIVDSSAVADIALRTGVASMVGAAMLPSVVASALRPSTTGADA EHLRFYGELAAAKDPEVSFPAPTVPPRISSRPANPVAEWTAHGRVHNIRFRSSFEAVNPALRDRCHGYRRNNVVHAQHWR HEDGPRPTLCVIHGFMGSAYLFNGQFLSLPWFYRSGYDVLLYTLPFHGRRAEKYSPYSGYGYFANGFAGFAEAMAQAVHD FRSLIDHLEFTGVDRVAVTGISLGGFTSALLACVDDRIQAVIPNVPVVTPDRTVDEWFPANKLVALNRRIAGLDPELEAA ASRYPSPLNYAPLVPRDRRLIITGLGDRLAPPQQAELLWEHWERCAFHWFPGNHLLHVSQPDYLRRMTRFLRDFMFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019149 [H]
Pfam domain/function: PF09752 DUF2048 [H]
EC number: NA
Molecular weight: Translated: 44216; Mature: 44085
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSADPVDPPVPVLDIPGADAGARGLPRQADLTLRQRMIVDSSAVADIALRTGVASMVG CCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AAMLPSVVASALRPSTTGADAEHLRFYGELAAAKDPEVSFPAPTVPPRISSRPANPVAEW HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TAHGRVHNIRFRSSFEAVNPALRDRCHGYRRNNVVHAQHWRHEDGPRPTLCVIHGFMGSA HHCCCEEEEEECCCHHHCCHHHHHHHCCHHHCCEEEHHHCCCCCCCCCEEEEEECCCCCE YLFNGQFLSLPWFYRSGYDVLLYTLPFHGRRAEKYSPYSGYGYFANGFAGFAEAMAQAVH EEECCEEEECCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DFRSLIDHLEFTGVDRVAVTGISLGGFTSALLACVDDRIQAVIPNVPVVTPDRTVDEWFP HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCC ANKLVALNRRIAGLDPELEAAASRYPSPLNYAPLVPRDRRLIITGLGDRLAPPQQAELLW CCCEEEECCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH EHWERCAFHWFPGNHLLHVSQPDYLRRMTRFLRDFMFD HHHHHCEEEECCCCCEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TQSADPVDPPVPVLDIPGADAGARGLPRQADLTLRQRMIVDSSAVADIALRTGVASMVG CCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH AAMLPSVVASALRPSTTGADAEHLRFYGELAAAKDPEVSFPAPTVPPRISSRPANPVAEW HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH TAHGRVHNIRFRSSFEAVNPALRDRCHGYRRNNVVHAQHWRHEDGPRPTLCVIHGFMGSA HHCCCEEEEEECCCHHHCCHHHHHHHCCHHHCCEEEHHHCCCCCCCCCEEEEEECCCCCE YLFNGQFLSLPWFYRSGYDVLLYTLPFHGRRAEKYSPYSGYGYFANGFAGFAEAMAQAVH EEECCEEEECCHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DFRSLIDHLEFTGVDRVAVTGISLGGFTSALLACVDDRIQAVIPNVPVVTPDRTVDEWFP HHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHCC ANKLVALNRRIAGLDPELEAAASRYPSPLNYAPLVPRDRRLIITGLGDRLAPPQQAELLW CCCEEEECCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHH EHWERCAFHWFPGNHLLHVSQPDYLRRMTRFLRDFMFD HHHHHCEEEECCCCCEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]