Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797364
Identifier: 108797364
GI number: 108797364
Start: 431111
End: 431518
Strand: Reverse
Name: 108797364
Synonym: Mmcs_0384
Alternate gene names: NA
Gene position: 431518-431111 (Counterclockwise)
Preceding gene: 108797365
Following gene: 108797362
Centisome position: 7.56
GC content: 66.67
Gene sequence:
>408_bases ATGTCCGCGGAGTCGCAACCGGTTTCCATCCTGCCGGAGAGTGAGTGCTGGCGGCTGCTGGACAGCGTGGCCCTGGGACG CCTCGTCACATGTGCCGGTGGCCAGCCGGAGATCTTCCCCGTCAACTTCGCCGTCCAGGACCGGACCGTGTTGTTCCGCA CGGCCGCGGGCACCAAGCTGACGAGCGCCGCGATCAGCAACCAGGTGCTGTTCGAGGCCGACGCGCACACCGCAACCGAG GGATGGAGCGTGGTCGTCAAGGGCGTCGCGCGCACCGTTCACGGTGACGACGAACTCGAAAAAGCAGCTGGGGCGCAGCT TTTTTCGTGGACGGCGACGACCAAACAGCACTTCGTGCGGATCAGGCCCGACCGGGTGACCGGCCGTCGGTTCGGCTTCG TCGCCTAG
Upstream 100 bases:
>100_bases CTGCGCCGCATGACACGCTTCCTGCGCGACTTCATGTTCGACTGACTGTTCACCGTCGGTTCGCCCGACGCCCGCCCAGC CGCGGGTAGCATCGCTGACC
Downstream 100 bases:
>100_bases CGCACGTCATTCCGTCGCGTCGGGCCGCCACGACCGCAGCTGCCGGAGCAGTGCGTTCTTCTTGTAGTGGTGTTCGTTCA TTCGACGCAGGATGTCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSAESQPVSILPESECWRLLDSVALGRLVTCAGGQPEIFPVNFAVQDRTVLFRTAAGTKLTSAAISNQVLFEADAHTATE GWSVVVKGVARTVHGDDELEKAAGAQLFSWTATTKQHFVRIRPDRVTGRRFGFVA
Sequences:
>Translated_135_residues MSAESQPVSILPESECWRLLDSVALGRLVTCAGGQPEIFPVNFAVQDRTVLFRTAAGTKLTSAAISNQVLFEADAHTATE GWSVVVKGVARTVHGDDELEKAAGAQLFSWTATTKQHFVRIRPDRVTGRRFGFVA >Mature_134_residues SAESQPVSILPESECWRLLDSVALGRLVTCAGGQPEIFPVNFAVQDRTVLFRTAAGTKLTSAAISNQVLFEADAHTATEG WSVVVKGVARTVHGDDELEKAAGAQLFSWTATTKQHFVRIRPDRVTGRRFGFVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14631; Mature: 14500
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAESQPVSILPESECWRLLDSVALGRLVTCAGGQPEIFPVNFAVQDRTVLFRTAAGTKL CCCCCCCEEECCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEECCCEEEEEECCCCCH TSAAISNQVLFEADAHTATEGWSVVVKGVARTVHGDDELEKAAGAQLFSWTATTKQHFVR HHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCEEEEE IRPDRVTGRRFGFVA ECCCCCCCCCCCCCC >Mature Secondary Structure SAESQPVSILPESECWRLLDSVALGRLVTCAGGQPEIFPVNFAVQDRTVLFRTAAGTKL CCCCCCEEECCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEECCCEEEEEECCCCCH TSAAISNQVLFEADAHTATEGWSVVVKGVARTVHGDDELEKAAGAQLFSWTATTKQHFVR HHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEEEECCCCEEEEE IRPDRVTGRRFGFVA ECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12218036; 9634230 [H]