Click here to switch to the map view.

The map label for this gene is 108797355

Identifier: 108797355

GI number: 108797355

Start: 421447

End: 422652

Strand: Reverse

Name: 108797355

Synonym: Mmcs_0375

Alternate gene names: NA

Gene position: 422652-421447 (Counterclockwise)

Preceding gene: 108797362

Following gene: 108797347

Centisome position: 7.41

GC content: 66.0

Gene sequence:

>1206_bases
ATGACGACGGGCCAGGTGTGGGCTGGAGTGGATGTTGGTAAAGAGCATCACTGGGTTTGTGCGGTCGACGACAGCGGGAA
GGTGGTGTTGTCGCGCCGGCTGGTCAACGACGAGCAACCGATCCGGGAGCTCGTCGCTGAAATCGACGAGCTGGCCGAGC
GAGTGTCGTGGACGGTGGACCTGACCACGGTGTATGCCGCACTGGTGTTGACGGTGCTGGCCGACGCCGGCAAAACGGTC
CGGTATCTGGCCGGCCGGGCGGTGTGGCAGGCCTCGGCGACCTACCGCGGTGGGGAGGCCAAAACCGATGCCAAAGACGC
TCGGGTGATCGCCGACCAGGCGCGCATGCGCGGCCAGGACTTGCCCGTTCTGCATCCCGATGATGACTTGATCAGCGAGT
TGCGGATGCTCACCGGCCATCGCGCCGACCTGGTGGCCGACCGCACCCGCACGATCAACCGGCTGCGCCAGCAACTCGTC
GCGGTCTGCCCGGCCCTGGAACGAGCCGCCCAACCGAGCCAAGACCGTGGCTGGGTGATACTGCTGGCGCGCTACCAGCG
TCCCAAAGCGATTCGACAAAGCGGTGTTTCGCGGCTGACCAAAGTCTTGACCGATGCCGGTGTGCGCAACGCCGCCTCGA
TCGCGGCGGCTGCGGTGGCTGCAGTGAAAACCCAGACGATGCGCCTGCCCGGCGAAGAGGTGGCCGCCGGGTTGATCGCT
GATCTGGCGCGGGAGGTGATCGCCCTCGATGACCGCATCAAGACCACCGACGCCGACATCGAGGGCCGATTTCGCCGCCA
TCCACTCGCCGAGGTGATCACCAGCATGCCCGGCATAGGATTTCGGCTGGGCGCCGAATTCCTCGCCGCCGTTGGTGATC
CCGCGCTGATCGGATCGGCTGACCAACTCGCGGCCTGGGCCGGCCTGGCGCCAGTGTCTCGAGACTCCGGAAAGCGCACC
GGACGACTGCACACCCCCAAGCGTTACAGTCGCCGACTGCGCCGAGTCATGTACATGTCGGCGTTGACCGCGATCCGCTG
CGACCCAGATTCCAAGGCCTATTACCAGCGCAAACGAGACGAAGGAAAGCGGCCGATCCCCGCCACCATCTGCCTGGCGC
GACGGCGCACCAACGTTCTCTACGCCCTCATCCGTGACAACCGGACCTGGCAACCTGATTCACCCCCGGTCACCGCCGCG
GCTTGA

Upstream 100 bases:

>100_bases
TGGCCGCTGATTGAGATCTGCGATGTGATCGCTTGTTTAAGGAAATGCTGGCGGGGTTGTCCATGGGGATCATGTTGGTA
GACAGGCGAAAAGAGGGGTG

Downstream 100 bases:

>100_bases
CTTCTTCATTGAGAGTCCTTTCGGATCGCGGAAAGATGTTGGGGCACTGACTGTCTGTTCAGGTGCGCGGTCCTCCCTCC
TGGCCCTCTGCGGGCTGGTC

Product: transposase IS116/IS110/IS902

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIRELVAEIDELAERVSWTVDLTTVYAALVLTVLADAGKTV
RYLAGRAVWQASATYRGGEAKTDAKDARVIADQARMRGQDLPVLHPDDDLISELRMLTGHRADLVADRTRTINRLRQQLV
AVCPALERAAQPSQDRGWVILLARYQRPKAIRQSGVSRLTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGEEVAAGLIA
DLAREVIALDDRIKTTDADIEGRFRRHPLAEVITSMPGIGFRLGAEFLAAVGDPALIGSADQLAAWAGLAPVSRDSGKRT
GRLHTPKRYSRRLRRVMYMSALTAIRCDPDSKAYYQRKRDEGKRPIPATICLARRRTNVLYALIRDNRTWQPDSPPVTAA
A

Sequences:

>Translated_401_residues
MTTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIRELVAEIDELAERVSWTVDLTTVYAALVLTVLADAGKTV
RYLAGRAVWQASATYRGGEAKTDAKDARVIADQARMRGQDLPVLHPDDDLISELRMLTGHRADLVADRTRTINRLRQQLV
AVCPALERAAQPSQDRGWVILLARYQRPKAIRQSGVSRLTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGEEVAAGLIA
DLAREVIALDDRIKTTDADIEGRFRRHPLAEVITSMPGIGFRLGAEFLAAVGDPALIGSADQLAAWAGLAPVSRDSGKRT
GRLHTPKRYSRRLRRVMYMSALTAIRCDPDSKAYYQRKRDEGKRPIPATICLARRRTNVLYALIRDNRTWQPDSPPVTAA
A
>Mature_400_residues
TTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIRELVAEIDELAERVSWTVDLTTVYAALVLTVLADAGKTVR
YLAGRAVWQASATYRGGEAKTDAKDARVIADQARMRGQDLPVLHPDDDLISELRMLTGHRADLVADRTRTINRLRQQLVA
VCPALERAAQPSQDRGWVILLARYQRPKAIRQSGVSRLTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGEEVAAGLIAD
LAREVIALDDRIKTTDADIEGRFRRHPLAEVITSMPGIGFRLGAEFLAAVGDPALIGSADQLAAWAGLAPVSRDSGKRTG
RLHTPKRYSRRLRRVMYMSALTAIRCDPDSKAYYQRKRDEGKRPIPATICLARRRTNVLYALIRDNRTWQPDSPPVTAAA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 44044; Mature: 43913

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIRELVAEIDELAERVSWTVD
CCCCCEEECCCCCCCCCEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHEEHH
LTTVYAALVLTVLADAGKTVRYLAGRAVWQASATYRGGEAKTDAKDARVIADQARMRGQD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
LPVLHPDDDLISELRMLTGHRADLVADRTRTINRLRQQLVAVCPALERAAQPSQDRGWVI
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LLARYQRPKAIRQSGVSRLTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGEEVAAGLIA
EEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DLAREVIALDDRIKTTDADIEGRFRRHPLAEVITSMPGIGFRLGAEFLAAVGDPALIGSA
HHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCH
DQLAAWAGLAPVSRDSGKRTGRLHTPKRYSRRLRRVMYMSALTAIRCDPDSKAYYQRKRD
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
EGKRPIPATICLARRRTNVLYALIRDNRTWQPDSPPVTAAA
CCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTGQVWAGVDVGKEHHWVCAVDDSGKVVLSRRLVNDEQPIRELVAEIDELAERVSWTVD
CCCCEEECCCCCCCCCEEEEECCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHEEHH
LTTVYAALVLTVLADAGKTVRYLAGRAVWQASATYRGGEAKTDAKDARVIADQARMRGQD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
LPVLHPDDDLISELRMLTGHRADLVADRTRTINRLRQQLVAVCPALERAAQPSQDRGWVI
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LLARYQRPKAIRQSGVSRLTKVLTDAGVRNAASIAAAAVAAVKTQTMRLPGEEVAAGLIA
EEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
DLAREVIALDDRIKTTDADIEGRFRRHPLAEVITSMPGIGFRLGAEFLAAVGDPALIGSA
HHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCH
DQLAAWAGLAPVSRDSGKRTGRLHTPKRYSRRLRRVMYMSALTAIRCDPDSKAYYQRKRD
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
EGKRPIPATICLARRRTNVLYALIRDNRTWQPDSPPVTAAA
CCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1700062 [H]