| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797318
Identifier: 108797318
GI number: 108797318
Start: 374575
End: 376053
Strand: Direct
Name: 108797318
Synonym: Mmcs_0338
Alternate gene names: NA
Gene position: 374575-376053 (Clockwise)
Preceding gene: 108797316
Following gene: 108797320
Centisome position: 6.57
GC content: 68.22
Gene sequence:
>1479_bases GTGTGCGCGCGAAAGTCATCGCCTCGCTTCGATTTCTTGGCACATGCTCGCGGGCTGCTCGAAACCTCCTTCGTCACAGT GGTTTCCATAGTCACATCGCCGGCGGTTTTGTCAGACCCTCGAACTAGCGTTCGAAGCATGGATGGATTGTCTGGCGCGG TCGACCACCTCGTGGCGTCCATCGCCGCTCTGCAAACCGCCTCCATCGACGAGCTCTCCTACGAGCAGATCGTGGCCGAA CTGGACCGCATCAAAGCCGCGGTGTGGGCGGTGCCCAGTGTGGAGCACCGCCTGACCGCGCGGCTGATGGACGCCGACCC CCATGAACTCGGCGCCACCTCTATCAAGGAGGTGCTCGCCAACCACCTACGCATCTCCCGCAAAACCGCCGGCGACCGGC TCACCGACGCGCGCCAGTTGGGGCCGCGCTACACCCTGACCGGGGAGCGGGTGCAGACCGAGTTGGCCCACACCGCCGAT GCGGTCGCCCGCGGCGACATCGGCACCACGCATGTGCGCATCATCCAGGAGTTCGTCAGGAAACTTCCGGCATGGGTGTC CTGGGAGCGCCGCGACCACTACGAACGCGACCTGGTCGGCCACGCCAGCGCACTGCGGCCCGAGGACTTCCGCAAGGTCG CCGACACCCTGCTGGGGTTCATCGACCAGGACGGCACCGAACCCGACCACCACACCCACCAACGCCGCCGCGAGTTCACC GTCGGCCGCCAACAGGCCGACGGCATGAGCCGGGTCACGGGCTGGCTCACCCCCGAAGCCCGCGCGCACTGGGACCTCAT CGCCGCCAAATACGCCGCCCCCGGCACCAACCTGCCCCACGACGACGCCCACACCGGCCGCGACGACCGCACCACCGGCC AACGCCACCACGACGCGCTCACCACCGTCCTACGCGACGCGGTCACCTCCGGCTCCCTCGGCCAGGTCGCCGGCGTTCCC GCCAGCATCGTCGCGACGATGACGCTCAGCGAGCTTGAACGTGCCGCCGGGTGGGCGCACACCGGCGGCGGCAACCGCCT GCCCATCCGGGATCTGATCCGGATGGCCGCCCACTCCCGGCACTACCTGGCGGTGTTCGACGACCACACCGAAGAGATCC TGTATTTCGGCCGCGCCCGCCGCACGGCGTCGACCGCGCAACGCCTAGCCCTGTTCGCCCGCGACAAAGGCTGCACCCAC CCCGGCTGCACCGTGCCGTTCTACTGGACCGAAGCCCACCACACCCACGACTACTCCCGCGGTGGGCGCACCGACATCGA CGACCTCACCCTGGCGTGTCAACCCGCCAACCTGCTCATCGAGAAAACCGGATGGACCACCCACCGGCCCGGTAACGGCC GCACCGAATGGACCCCACCCGCCGACCACGACACCGGCCAACCCCGCATCAACAACCACTTCCACCCCCACCGCTACCTC ACCGACAACGACGACGGTCAAGACGACGAGCCCGAATAG
Upstream 100 bases:
>100_bases GCCAGGTCTGTTGGTCGACTTCGGGCGGCAGCCCGGTGATTCCAGTGGTCATCGCGTCATCCCGTCGTGGTCGTACGAGT TGTTCACGGGTATTGACTCA
Downstream 100 bases:
>100_bases CCATGCAGCACAGCGTGTTGCACGCGCCGGTCCGCCTCAGCGTCGATCCGGTAGTTCCTCGATGAGCTCCTCGAGGAAAC CGCCTGCCTCGTGGCCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MCARKSSPRFDFLAHARGLLETSFVTVVSIVTSPAVLSDPRTSVRSMDGLSGAVDHLVASIAALQTASIDELSYEQIVAE LDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLANHLRISRKTAGDRLTDARQLGPRYTLTGERVQTELAHTAD AVARGDIGTTHVRIIQEFVRKLPAWVSWERRDHYERDLVGHASALRPEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFT VGRQQADGMSRVTGWLTPEARAHWDLIAAKYAAPGTNLPHDDAHTGRDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVP ASIVATMTLSELERAAGWAHTGGGNRLPIRDLIRMAAHSRHYLAVFDDHTEEILYFGRARRTASTAQRLALFARDKGCTH PGCTVPFYWTEAHHTHDYSRGGRTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTEWTPPADHDTGQPRINNHFHPHRYL TDNDDGQDDEPE
Sequences:
>Translated_492_residues MCARKSSPRFDFLAHARGLLETSFVTVVSIVTSPAVLSDPRTSVRSMDGLSGAVDHLVASIAALQTASIDELSYEQIVAE LDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLANHLRISRKTAGDRLTDARQLGPRYTLTGERVQTELAHTAD AVARGDIGTTHVRIIQEFVRKLPAWVSWERRDHYERDLVGHASALRPEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFT VGRQQADGMSRVTGWLTPEARAHWDLIAAKYAAPGTNLPHDDAHTGRDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVP ASIVATMTLSELERAAGWAHTGGGNRLPIRDLIRMAAHSRHYLAVFDDHTEEILYFGRARRTASTAQRLALFARDKGCTH PGCTVPFYWTEAHHTHDYSRGGRTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTEWTPPADHDTGQPRINNHFHPHRYL TDNDDGQDDEPE >Mature_492_residues MCARKSSPRFDFLAHARGLLETSFVTVVSIVTSPAVLSDPRTSVRSMDGLSGAVDHLVASIAALQTASIDELSYEQIVAE LDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLANHLRISRKTAGDRLTDARQLGPRYTLTGERVQTELAHTAD AVARGDIGTTHVRIIQEFVRKLPAWVSWERRDHYERDLVGHASALRPEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFT VGRQQADGMSRVTGWLTPEARAHWDLIAAKYAAPGTNLPHDDAHTGRDDRTTGQRHHDALTTVLRDAVTSGSLGQVAGVP ASIVATMTLSELERAAGWAHTGGGNRLPIRDLIRMAAHSRHYLAVFDDHTEEILYFGRARRTASTAQRLALFARDKGCTH PGCTVPFYWTEAHHTHDYSRGGRTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTEWTPPADHDTGQPRINNHFHPHRYL TDNDDGQDDEPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 54636; Mature: 54636
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCARKSSPRFDFLAHARGLLETSFVTVVSIVTSPAVLSDPRTSVRSMDGLSGAVDHLVAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCHHHHHHHHHHH IAALQTASIDELSYEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH NHLRISRKTAGDRLTDARQLGPRYTLTGERVQTELAHTADAVARGDIGTTHVRIIQEFVR HHHHHHHHHCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KLPAWVSWERRDHYERDLVGHASALRPEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFT HCHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VGRQQADGMSRVTGWLTPEARAHWDLIAAKYAAPGTNLPHDDAHTGRDDRTTGQRHHDAL CCHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TTVLRDAVTSGSLGQVAGVPASIVATMTLSELERAAGWAHTGGGNRLPIRDLIRMAAHSR HHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC HYLAVFDDHTEEILYFGRARRTASTAQRLALFARDKGCTHPGCTVPFYWTEAHHTHDYSR CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC GGRTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTEWTPPADHDTGQPRINNHFHPHRYL CCCCCHHHCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDNDDGQDDEPE CCCCCCCCCCCC >Mature Secondary Structure MCARKSSPRFDFLAHARGLLETSFVTVVSIVTSPAVLSDPRTSVRSMDGLSGAVDHLVAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCHHHHHHHHHHH IAALQTASIDELSYEQIVAELDRIKAAVWAVPSVEHRLTARLMDADPHELGATSIKEVLA HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHHHHHH NHLRISRKTAGDRLTDARQLGPRYTLTGERVQTELAHTADAVARGDIGTTHVRIIQEFVR HHHHHHHHHCCCHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KLPAWVSWERRDHYERDLVGHASALRPEDFRKVADTLLGFIDQDGTEPDHHTHQRRREFT HCHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VGRQQADGMSRVTGWLTPEARAHWDLIAAKYAAPGTNLPHDDAHTGRDDRTTGQRHHDAL CCHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH TTVLRDAVTSGSLGQVAGVPASIVATMTLSELERAAGWAHTGGGNRLPIRDLIRMAAHSR HHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCC HYLAVFDDHTEEILYFGRARRTASTAQRLALFARDKGCTHPGCTVPFYWTEAHHTHDYSR CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC GGRTDIDDLTLACQPANLLIEKTGWTTHRPGNGRTEWTPPADHDTGQPRINNHFHPHRYL CCCCCHHHCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDNDDGQDDEPE CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]