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The map label for this gene is yycB [H]

Identifier: 108797320

GI number: 108797320

Start: 376802

End: 378013

Strand: Direct

Name: yycB [H]

Synonym: Mmcs_0340

Alternate gene names: 108797320

Gene position: 376802-378013 (Clockwise)

Preceding gene: 108797318

Following gene: 108797322

Centisome position: 6.6

GC content: 69.39

Gene sequence:

>1212_bases
GTGAAGGGCCACACGCGCGTCGACGCCACAGCCGGTCAGGCGTCCGAAGCCGGCGTGCGGGCTGCCGGCGGCGTGCTGCT
CACGATCGCGGTCATCCTCACCGCGCTGAATCTCCGTCCCGCGATCACCAGCGTCGGACCGATGCTCGGCGAGATGCGCA
CGTCGATGGGGGCCAGCGCCACCTGGGCCGGTGTCCTGACCACCCTGCCCGGATTGTGTTTCGCCGCTGCGGGATTGACG
GCCCCATGGCTGTCACGACGGTTCGGTCTGAGTAGGGCCATCAGCGCCGCCCTGACCATCCTGAGCGCCGGGCTGCTCAT
CCGCGTCCTGGACGGCCCGTATGTGGTGCTCGGCGGAACGCTGGTCGCCACCGCCGGCATCGCGTTGACCAACGTGTTGA
TCCCCGTGGTGATCAAGGGCTCCTTCCCGACCCGCGTCGGGCTCATGACCGGCGTCTACACCGCCGCGCTGCAGGGCGGC
GGTGCGCTGGGCTCCGCGGTGACACCCGGATTGGAAGCCGTGTTCGACGACTGGCGCACCGCCCTGGCGTCGTGGGCCGT
CGTCGCCGTCGTCGCGCTGGTCTTCTGGATCCTGGCGTCCCGCGGCATCGCCGGCGGGCAGCCGTCGACGACCCGGGTCA
ACGGACGGTCCCTGCTGCGCAACCGGATGGCGTGGACGGTGACGCTGTTCTTCGGATGCCAGTCACTGCTGGCCTACGTG
ATGATGGGCTGGCTGCCCGAGGTCTTCATCGACAGCGGGGTGAGCAAGTCGACCGCAGGGCTGCTGGTCGGGTTGATGTC
GCTCATCGCGGTCCCGATCAGCATCTTCGTCTCACCGCTGGCCGCCCGCTCGTCGAGTCAGAGTCCCTGGATCGTCGGCC
TCGGCACGATCGGCGTTGCGGGCGTGATCGGACTGCTCATCGACCCCGGCGCCGCCCCGCTGCTGTGGAGCATCCTCGTC
GGCCTCGGGCTGAGTGTGTTCTCGCTGGCGCTAACCGTGATCGCGCTGCGTGCCCGCACGACCGAGGACACCGCCCAGTT
GTCCGGCATGGCGCAGGGATTCGGCTACCTGCTCGCGGGGCTCGGCCCGTTCCTGTTCGGGCTCCTGCACGACGTCACCG
ACGGGTGGACGGTGCCGTGGGCCATGGTGCTCGTCGTCTATCTCGTGCAGATGACCATGGGCGCCTTGGCCGGACGCAAC
CGGTACGTGTGA

Upstream 100 bases:

>100_bases
TTGAGCGATCACCTGGTCCACCAAGCCTGCGCGGCGGGTAGTGGCGAGCGGCACCGAAACTCCATTCGTCCAATCATGGG
ATGTATGGGACGATACCGCG

Downstream 100 bases:

>100_bases
CTCAGCCGCAGAGCCCGTCGAGGGTGGCGGTGAGCGCGTCCAGATCGCGTTTGACGGCCTGCTGGCCGGGATCGCTGTCC
GGTGCGCCCGCGGTGGCCGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKGHTRVDATAGQASEAGVRAAGGVLLTIAVILTALNLRPAITSVGPMLGEMRTSMGASATWAGVLTTLPGLCFAAAGLT
APWLSRRFGLSRAISAALTILSAGLLIRVLDGPYVVLGGTLVATAGIALTNVLIPVVIKGSFPTRVGLMTGVYTAALQGG
GALGSAVTPGLEAVFDDWRTALASWAVVAVVALVFWILASRGIAGGQPSTTRVNGRSLLRNRMAWTVTLFFGCQSLLAYV
MMGWLPEVFIDSGVSKSTAGLLVGLMSLIAVPISIFVSPLAARSSSQSPWIVGLGTIGVAGVIGLLIDPGAAPLLWSILV
GLGLSVFSLALTVIALRARTTEDTAQLSGMAQGFGYLLAGLGPFLFGLLHDVTDGWTVPWAMVLVVYLVQMTMGALAGRN
RYV

Sequences:

>Translated_403_residues
MKGHTRVDATAGQASEAGVRAAGGVLLTIAVILTALNLRPAITSVGPMLGEMRTSMGASATWAGVLTTLPGLCFAAAGLT
APWLSRRFGLSRAISAALTILSAGLLIRVLDGPYVVLGGTLVATAGIALTNVLIPVVIKGSFPTRVGLMTGVYTAALQGG
GALGSAVTPGLEAVFDDWRTALASWAVVAVVALVFWILASRGIAGGQPSTTRVNGRSLLRNRMAWTVTLFFGCQSLLAYV
MMGWLPEVFIDSGVSKSTAGLLVGLMSLIAVPISIFVSPLAARSSSQSPWIVGLGTIGVAGVIGLLIDPGAAPLLWSILV
GLGLSVFSLALTVIALRARTTEDTAQLSGMAQGFGYLLAGLGPFLFGLLHDVTDGWTVPWAMVLVVYLVQMTMGALAGRN
RYV
>Mature_403_residues
MKGHTRVDATAGQASEAGVRAAGGVLLTIAVILTALNLRPAITSVGPMLGEMRTSMGASATWAGVLTTLPGLCFAAAGLT
APWLSRRFGLSRAISAALTILSAGLLIRVLDGPYVVLGGTLVATAGIALTNVLIPVVIKGSFPTRVGLMTGVYTAALQGG
GALGSAVTPGLEAVFDDWRTALASWAVVAVVALVFWILASRGIAGGQPSTTRVNGRSLLRNRMAWTVTLFFGCQSLLAYV
MMGWLPEVFIDSGVSKSTAGLLVGLMSLIAVPISIFVSPLAARSSSQSPWIVGLGTIGVAGVIGLLIDPGAAPLLWSILV
GLGLSVFSLALTVIALRARTTEDTAQLSGMAQGFGYLLAGLGPFLFGLLHDVTDGWTVPWAMVLVVYLVQMTMGALAGRN
RYV

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=381, Percent_Identity=36.4829396325459, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1786536, Length=359, Percent_Identity=31.4763231197772, Blast_Score=132, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41448; Mature: 41448

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGHTRVDATAGQASEAGVRAAGGVLLTIAVILTALNLRPAITSVGPMLGEMRTSMGASA
CCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
TWAGVLTTLPGLCFAAAGLTAPWLSRRFGLSRAISAALTILSAGLLIRVLDGPYVVLGGT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCH
LVATAGIALTNVLIPVVIKGSFPTRVGLMTGVYTAALQGGGALGSAVTPGLEAVFDDWRT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHH
ALASWAVVAVVALVFWILASRGIAGGQPSTTRVNGRSLLRNRMAWTVTLFFGCQSLLAYV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
MMGWLPEVFIDSGVSKSTAGLLVGLMSLIAVPISIFVSPLAARSSSQSPWIVGLGTIGVA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH
GVIGLLIDPGAAPLLWSILVGLGLSVFSLALTVIALRARTTEDTAQLSGMAQGFGYLLAG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LGPFLFGLLHDVTDGWTVPWAMVLVVYLVQMTMGALAGRNRYV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKGHTRVDATAGQASEAGVRAAGGVLLTIAVILTALNLRPAITSVGPMLGEMRTSMGASA
CCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
TWAGVLTTLPGLCFAAAGLTAPWLSRRFGLSRAISAALTILSAGLLIRVLDGPYVVLGGT
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEECCH
LVATAGIALTNVLIPVVIKGSFPTRVGLMTGVYTAALQGGGALGSAVTPGLEAVFDDWRT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHH
ALASWAVVAVVALVFWILASRGIAGGQPSTTRVNGRSLLRNRMAWTVTLFFGCQSLLAYV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
MMGWLPEVFIDSGVSKSTAGLLVGLMSLIAVPISIFVSPLAARSSSQSPWIVGLGTIGVA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHH
GVIGLLIDPGAAPLLWSILVGLGLSVFSLALTVIALRARTTEDTAQLSGMAQGFGYLLAG
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LGPFLFGLLHDVTDGWTVPWAMVLVVYLVQMTMGALAGRNRYV
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]