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The map label for this gene is ybdA [C]

Identifier: 108797205

GI number: 108797205

Start: 247502

End: 249103

Strand: Direct

Name: ybdA [C]

Synonym: Mmcs_0225

Alternate gene names: 108797205

Gene position: 247502-249103 (Clockwise)

Preceding gene: 108797202

Following gene: 108797209

Centisome position: 4.34

GC content: 69.85

Gene sequence:

>1602_bases
ATGGCCACACCGCAAACACGACCCGTGGTGTCCTCATGGGCGCCGTTCTCCTCTCCTGTCTACCGCGCGCTGTGGATCGC
GCAGTTCGTCTCGAACCTCGGCACGTGGATGCAGACGGTGGGTGCACAGTGGATGCTGGTCGGCGACCCCGGTGCCGCGG
TACTCGTGCCGCTGGTGCAGACCGCGACGACGCTGCCGATCATGCTGCTGGCGTTGCCGTCGGGTGTGCTCGCCGATCTG
ATCGACCGGCGCCGGCTTCTGATCGCCACCCAGGCCGCGATGGCGTCGGGGGTGGCGGCGCTGGCGATGCTGACCGGCTT
CGGCCTCGCGACACCCACCGTTCTGCTGCTTCTGCTCTTCCTGATCGGGTGTGGGCAGGCCCTGACAACGCCCGCGTGGC
AGGCCATTCAACCGGAACTCGTCCCGCGCGAACAGATTCCGGCCGCGGCGGCGTTGGCCAGCATGAGCGTGAACGGCGCC
CGGGCGATCGGCCCCGCGGTCGCCGGCGTCCTGGTGTCCCTGTCGGGGCCCACCACGGTGTTCGCGCTCAATGCGTTCTC
GTTCATCGGCATCGTCATGGTGCTGCTCTGGTGGCGGCGGCCCGTGGAGGAGGCGACGATGCCTCTCGAGCGGCCGATAT
CCGCGCTGAGCGCCGGCCGGCGGTACATCCGCAGCTCACCGGTGATCCGGCGGATCCTGTTGCGGACCGTGCTGTTCACC
GCACCCGCCAGCGCGCTGTGGGGCCTGCTCGCGGTGATCGCCGCCAACCAGCTGAACCTGTCGTCGTCGGGGTACGGGCT
GCTGCTCGGCGCGCTGGGTGTCGGGGCGGTGCTGGGTGCGGTGGTGTTGTCGCGGCTGCATGCGCGCTTCGGCCAGAACC
AGCTGATGGTGATGGGTGCGGTCGGTTTCGCCGGTGCCACCGTGGTACTCGCGACGGTGCACGTGCTGGCCGCGGTGCTC
GCCGCGCTGGTGGTGGGCGGGGTGTCGTGGCTGCTCACGATGTCGACACTCAACGCCTCGATGCAGCTGAGCCTGCCCGC
CTGGGTGCGGGCGCGCGGACTGTCGGTCTACCAGTTGGTCTTCACCGGAAGTCAGGCGATCGGCTCGTTGGTCTGGGGTG
TGGTCGCGGGCGCGACGAGCGGGGTGACGGCGTTGCTGATCAGCGCTGCCCTGCTGATCGTGTGCGGGGTGTCGGTCGCG
TGGTGGCCGCTGCACCCGGCCACCGGCACGCTCGACGTGACGCCGTCGGCGCACTGGGGTGAGCCGGCGCTGGTGTTCGA
GCCCGATCCGCAGGACGGGCCGGTGGTGGTGCTGCAGTCCTACGTCGTGGCGCCGAAGGACGAGGCGGGTTTCCTGGCGC
TCATGCAGCGGGTCCGGCGGTCTCGGCAGCGGACCGGCGCGATGGAGTGGGGGATCTTCCGCAGCGGCGAGTCCGCCGAC
ACCTTCGTGGAACTCTTCCTCGTCCGGTCGTGGGACGAACATCTGCGCCAGCATCTGGTGCGCCAGACCGCCCTCGATCT
GGCCCTCGAGCGTGAGATCGAGGGCTATGTCCACGGCGAGTCGACGCTGCGGCATTTCATCGCGGTGCGGAACGGGCGTT
GA

Upstream 100 bases:

>100_bases
ACAGGCCCGATGCTAGGGCGCGGTGTGCTGCGGGGGCGTGGTTTGCGGGGATCGGCGCTGCAGCGGGTACCCGCTAGCGG
ACCCGAGGGAGGAACGCCGC

Downstream 100 bases:

>100_bases
ACGGCACCGCCGAGGCGGCCAGCGCCGCCACCGACACCAGCGCCAGCAACTGCACTCCCGGTTCGAAACCGACGTAGCCG
TCCACTGAGCGCCAGGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Integral Membrane Efflux Protein; MFS Permease; MFS Family Transporter; Facilitator Superfamily Permease; MFS Transporter; Transmembrane Efflux Protein; Permease; Mfs Transporter; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Multidrug ABC Transporter; Transport Transmembrane Protein; Transporter Facilitator Family; Facilitator Superfamily Transmembrane Transporter; Permease Facilitator Superfamily; ABC Transporter Permease Protein; Facilitator Transpoter; MFS Family Membrane Efflux Protein; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein; Permeases Of Facilitator Superfamily; MFS Superfamily Transporter

Number of amino acids: Translated: 533; Mature: 532

Protein sequence:

>533_residues
MATPQTRPVVSSWAPFSSPVYRALWIAQFVSNLGTWMQTVGAQWMLVGDPGAAVLVPLVQTATTLPIMLLALPSGVLADL
IDRRRLLIATQAAMASGVAALAMLTGFGLATPTVLLLLLFLIGCGQALTTPAWQAIQPELVPREQIPAAAALASMSVNGA
RAIGPAVAGVLVSLSGPTTVFALNAFSFIGIVMVLLWWRRPVEEATMPLERPISALSAGRRYIRSSPVIRRILLRTVLFT
APASALWGLLAVIAANQLNLSSSGYGLLLGALGVGAVLGAVVLSRLHARFGQNQLMVMGAVGFAGATVVLATVHVLAAVL
AALVVGGVSWLLTMSTLNASMQLSLPAWVRARGLSVYQLVFTGSQAIGSLVWGVVAGATSGVTALLISAALLIVCGVSVA
WWPLHPATGTLDVTPSAHWGEPALVFEPDPQDGPVVVLQSYVVAPKDEAGFLALMQRVRRSRQRTGAMEWGIFRSGESAD
TFVELFLVRSWDEHLRQHLVRQTALDLALEREIEGYVHGESTLRHFIAVRNGR

Sequences:

>Translated_533_residues
MATPQTRPVVSSWAPFSSPVYRALWIAQFVSNLGTWMQTVGAQWMLVGDPGAAVLVPLVQTATTLPIMLLALPSGVLADL
IDRRRLLIATQAAMASGVAALAMLTGFGLATPTVLLLLLFLIGCGQALTTPAWQAIQPELVPREQIPAAAALASMSVNGA
RAIGPAVAGVLVSLSGPTTVFALNAFSFIGIVMVLLWWRRPVEEATMPLERPISALSAGRRYIRSSPVIRRILLRTVLFT
APASALWGLLAVIAANQLNLSSSGYGLLLGALGVGAVLGAVVLSRLHARFGQNQLMVMGAVGFAGATVVLATVHVLAAVL
AALVVGGVSWLLTMSTLNASMQLSLPAWVRARGLSVYQLVFTGSQAIGSLVWGVVAGATSGVTALLISAALLIVCGVSVA
WWPLHPATGTLDVTPSAHWGEPALVFEPDPQDGPVVVLQSYVVAPKDEAGFLALMQRVRRSRQRTGAMEWGIFRSGESAD
TFVELFLVRSWDEHLRQHLVRQTALDLALEREIEGYVHGESTLRHFIAVRNGR
>Mature_532_residues
ATPQTRPVVSSWAPFSSPVYRALWIAQFVSNLGTWMQTVGAQWMLVGDPGAAVLVPLVQTATTLPIMLLALPSGVLADLI
DRRRLLIATQAAMASGVAALAMLTGFGLATPTVLLLLLFLIGCGQALTTPAWQAIQPELVPREQIPAAAALASMSVNGAR
AIGPAVAGVLVSLSGPTTVFALNAFSFIGIVMVLLWWRRPVEEATMPLERPISALSAGRRYIRSSPVIRRILLRTVLFTA
PASALWGLLAVIAANQLNLSSSGYGLLLGALGVGAVLGAVVLSRLHARFGQNQLMVMGAVGFAGATVVLATVHVLAAVLA
ALVVGGVSWLLTMSTLNASMQLSLPAWVRARGLSVYQLVFTGSQAIGSLVWGVVAGATSGVTALLISAALLIVCGVSVAW
WPLHPATGTLDVTPSAHWGEPALVFEPDPQDGPVVVLQSYVVAPKDEAGFLALMQRVRRSRQRTGAMEWGIFRSGESADT
FVELFLVRSWDEHLRQHLVRQTALDLALEREIEGYVHGESTLRHFIAVRNGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56476; Mature: 56345

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPQTRPVVSSWAPFSSPVYRALWIAQFVSNLGTWMQTVGAQWMLVGDPGAAVLVPLVQ
CCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
TATTLPIMLLALPSGVLADLIDRRRLLIATQAAMASGVAALAMLTGFGLATPTVLLLLLF
HHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LIGCGQALTTPAWQAIQPELVPREQIPAAAALASMSVNGARAIGPAVAGVLVSLSGPTTV
HHCCCHHHCCCCHHHCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCEE
FALNAFSFIGIVMVLLWWRRPVEEATMPLERPISALSAGRRYIRSSPVIRRILLRTVLFT
EHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
APASALWGLLAVIAANQLNLSSSGYGLLLGALGVGAVLGAVVLSRLHARFGQNQLMVMGA
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
VGFAGATVVLATVHVLAAVLAALVVGGVSWLLTMSTLNASMQLSLPAWVRARGLSVYQLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCEEEEEE
FTGSQAIGSLVWGVVAGATSGVTALLISAALLIVCGVSVAWWPLHPATGTLDVTPSAHWG
HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCEEECCCCCCCC
EPALVFEPDPQDGPVVVLQSYVVAPKDEAGFLALMQRVRRSRQRTGAMEWGIFRSGESAD
CCEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHH
TFVELFLVRSWDEHLRQHLVRQTALDLALEREIEGYVHGESTLRHFIAVRNGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATPQTRPVVSSWAPFSSPVYRALWIAQFVSNLGTWMQTVGAQWMLVGDPGAAVLVPLVQ
CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
TATTLPIMLLALPSGVLADLIDRRRLLIATQAAMASGVAALAMLTGFGLATPTVLLLLLF
HHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LIGCGQALTTPAWQAIQPELVPREQIPAAAALASMSVNGARAIGPAVAGVLVSLSGPTTV
HHCCCHHHCCCCHHHCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCEE
FALNAFSFIGIVMVLLWWRRPVEEATMPLERPISALSAGRRYIRSSPVIRRILLRTVLFT
EHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
APASALWGLLAVIAANQLNLSSSGYGLLLGALGVGAVLGAVVLSRLHARFGQNQLMVMGA
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
VGFAGATVVLATVHVLAAVLAALVVGGVSWLLTMSTLNASMQLSLPAWVRARGLSVYQLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHCCCEEEEEE
FTGSQAIGSLVWGVVAGATSGVTALLISAALLIVCGVSVAWWPLHPATGTLDVTPSAHWG
HCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCEEECCCCCCCC
EPALVFEPDPQDGPVVVLQSYVVAPKDEAGFLALMQRVRRSRQRTGAMEWGIFRSGESAD
CCEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHH
TFVELFLVRSWDEHLRQHLVRQTALDLALEREIEGYVHGESTLRHFIAVRNGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA