Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is cht60 [H]
Identifier: 108797209
GI number: 108797209
Start: 254102
End: 255307
Strand: Direct
Name: cht60 [H]
Synonym: Mmcs_0229
Alternate gene names: 108797209
Gene position: 254102-255307 (Clockwise)
Preceding gene: 108797205
Following gene: 108797214
Centisome position: 4.45
GC content: 73.55
Gene sequence:
>1206_bases GTGTCAGAGCCCATGGCTTGGACCCGAGGACTGTGTGCACTGGTCGCGACGTCGGGAATGCTGCTCGCGTGCTCGTCGCC GAAGCAGGAACCCGCGGCCGCACCGGCCGATCCGGCGATCACCGCCGCCCCAGTCTCCGCCGCCCCCGCCGTTCCGCTGA AGGCCCCGGTGCCGCTGGCGCCCGGCGCTGCGGCATGCGGTCAGGGCGCCGCGTTGCTCTCGGAGATGACGACCCGCGAC AAGCTGGCCCAGCTGCTGATGGTCGGCGTCAGCGGCGCCGCGGACGCCCGCGCGGTGGTCGACAACCACCGCATCGGCGG CATCATGATCGGCAGTTGGACCGACCTGTCGATGATGGGCGCCCCGCTGGCCGAGATCGCCGCCTCCGCGGGCCCGCTGC CGCTGGCGGTCAGCGTCGACGAGGAGGGCGGCCGGGTCTCCCGGCTGGCTTCACTGATCGGCAGCCAACCGTCGGCGCGG GCGCTGGCCCAGAGTTCGACCCCCGACCAGGTCTACGGCATCGCGCTCGAACGGGGCCGGGCGATGCGCGGTCTCGGCGT CACGATCGACTTCGCGCCGGTCGTCGACGTCACCGGGGCCAGTGCCGCCATCGGTGACCGGTCCTTCGGCGACGACCCGG CGACGGTCACCGAATACGCCGGGGCGTACGCCCGCGGGCTGCGCGACGCCGGGGTGCTGCCGGTGCTCAAACACTTCCCG GGCCACGGCAACGCCTCCGGCGACTCGCACACCGAGGGCGTTGTCACCCCGCCGCTGTCCGAGCTGCAGAACTCCGACCT CGTGCCGTACCGCACGCTGACCGCGCAGGCGCCGGTCGGGGTGATGGTCGGCCACATGCAGGTGCCGGGACTGACCGGAA GCGATCCGGCGAGCCTGAGCCCGGCGGCCTACCAGCTGCTGCGGTCGGGCGGCTACGGCGGGCCGGGGTTCAACGGTCCG GTCTTCACCGACGACATCTCGAGCATGCGGGCGATCACCGATCGGTACGGGGTGGCCGATGCGGCGCTGCGCGCCCTGCA GGCCGGCGCCGACACCGCGTTGTGGGTGACGACGGCCGAGGTGCCCGCGGTGCTCGACCGGCTCGAACAGGCGGTGGGCT CCGGTGAGCTGACGATGCCGCGCGTCGACCAGTCGGTGCTGCGGGTGGCGGCGATGAAGGGCCCGAACCCGCGCTGCGGC GGCTGA
Upstream 100 bases:
>100_bases AGACTGACTCCCGGGCCGAGACGTCGGCGTGGGCGGTCATCGCACCTCCTCGTGGTCCCCTTCGACCCTATGGCATCGAC CCGCGTCGCCGGAGCCGTTA
Downstream 100 bases:
>100_bases CCGAACCTCACCGGACGACGGTCACCCGCTCGAGGGTGGGGTCCGCCGCGCTGATCGGGTTGCCCGCACCGCGCAGGCCG TCGAGTACGTCGACGACCTC
Product: beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; Chitobiase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSEPMAWTRGLCALVATSGMLLACSSPKQEPAAAPADPAITAAPVSAAPAVPLKAPVPLAPGAAACGQGAALLSEMTTRD KLAQLLMVGVSGAADARAVVDNHRIGGIMIGSWTDLSMMGAPLAEIAASAGPLPLAVSVDEEGGRVSRLASLIGSQPSAR ALAQSSTPDQVYGIALERGRAMRGLGVTIDFAPVVDVTGASAAIGDRSFGDDPATVTEYAGAYARGLRDAGVLPVLKHFP GHGNASGDSHTEGVVTPPLSELQNSDLVPYRTLTAQAPVGVMVGHMQVPGLTGSDPASLSPAAYQLLRSGGYGGPGFNGP VFTDDISSMRAITDRYGVADAALRALQAGADTALWVTTAEVPAVLDRLEQAVGSGELTMPRVDQSVLRVAAMKGPNPRCG G
Sequences:
>Translated_401_residues MSEPMAWTRGLCALVATSGMLLACSSPKQEPAAAPADPAITAAPVSAAPAVPLKAPVPLAPGAAACGQGAALLSEMTTRD KLAQLLMVGVSGAADARAVVDNHRIGGIMIGSWTDLSMMGAPLAEIAASAGPLPLAVSVDEEGGRVSRLASLIGSQPSAR ALAQSSTPDQVYGIALERGRAMRGLGVTIDFAPVVDVTGASAAIGDRSFGDDPATVTEYAGAYARGLRDAGVLPVLKHFP GHGNASGDSHTEGVVTPPLSELQNSDLVPYRTLTAQAPVGVMVGHMQVPGLTGSDPASLSPAAYQLLRSGGYGGPGFNGP VFTDDISSMRAITDRYGVADAALRALQAGADTALWVTTAEVPAVLDRLEQAVGSGELTMPRVDQSVLRVAAMKGPNPRCG G >Mature_400_residues SEPMAWTRGLCALVATSGMLLACSSPKQEPAAAPADPAITAAPVSAAPAVPLKAPVPLAPGAAACGQGAALLSEMTTRDK LAQLLMVGVSGAADARAVVDNHRIGGIMIGSWTDLSMMGAPLAEIAASAGPLPLAVSVDEEGGRVSRLASLIGSQPSARA LAQSSTPDQVYGIALERGRAMRGLGVTIDFAPVVDVTGASAAIGDRSFGDDPATVTEYAGAYARGLRDAGVLPVLKHFPG HGNASGDSHTEGVVTPPLSELQNSDLVPYRTLTAQAPVGVMVGHMQVPGLTGSDPASLSPAAYQLLRSGGYGGPGFNGPV FTDDISSMRAITDRYGVADAALRALQAGADTALWVTTAEVPAVLDRLEQAVGSGELTMPRVDQSVLRVAAMKGPNPRCGG
Specific function: Most active towards p-nitrophenyl-N-acetyl-beta-D- glucosaminide(PNP-beta-GlcNAc) and diacetylchitobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=295, Percent_Identity=30.8474576271186, Blast_Score=102, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 40487; Mature: 40356
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPMAWTRGLCALVATSGMLLACSSPKQEPAAAPADPAITAAPVSAAPAVPLKAPVPLA CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC PGAAACGQGAALLSEMTTRDKLAQLLMVGVSGAADARAVVDNHRIGGIMIGSWTDLSMMG CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCHHHHC APLAEIAASAGPLPLAVSVDEEGGRVSRLASLIGSQPSARALAQSSTPDQVYGIALERGR CCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHCCC AMRGLGVTIDFAPVVDVTGASAAIGDRSFGDDPATVTEYAGAYARGLRDAGVLPVLKHFP CCCCCCEEEEECCCEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCC GHGNASGDSHTEGVVTPPLSELQNSDLVPYRTLTAQAPVGVMVGHMQVPGLTGSDPASLS CCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCEEEECEECCCCCCCCCCCCC PAAYQLLRSGGYGGPGFNGPVFTDDISSMRAITDRYGVADAALRALQAGADTALWVTTAE HHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECCH VPAVLDRLEQAVGSGELTMPRVDQSVLRVAAMKGPNPRCGG HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEPMAWTRGLCALVATSGMLLACSSPKQEPAAAPADPAITAAPVSAAPAVPLKAPVPLA CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCC PGAAACGQGAALLSEMTTRDKLAQLLMVGVSGAADARAVVDNHRIGGIMIGSWTDLSMMG CCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCCHHHHC APLAEIAASAGPLPLAVSVDEEGGRVSRLASLIGSQPSARALAQSSTPDQVYGIALERGR CCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEHHHCCC AMRGLGVTIDFAPVVDVTGASAAIGDRSFGDDPATVTEYAGAYARGLRDAGVLPVLKHFP CCCCCCEEEEECCCEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCC GHGNASGDSHTEGVVTPPLSELQNSDLVPYRTLTAQAPVGVMVGHMQVPGLTGSDPASLS CCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCCEEEECEECCCCCCCCCCCCC PAAYQLLRSGGYGGPGFNGPVFTDDISSMRAITDRYGVADAALRALQAGADTALWVTTAE HHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEECCH VPAVLDRLEQAVGSGELTMPRVDQSVLRVAAMKGPNPRCGG HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8063094 [H]