| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797161
Identifier: 108797161
GI number: 108797161
Start: 200645
End: 201247
Strand: Reverse
Name: 108797161
Synonym: Mmcs_0181
Alternate gene names: NA
Gene position: 201247-200645 (Counterclockwise)
Preceding gene: 108797162
Following gene: 108797159
Centisome position: 3.53
GC content: 70.32
Gene sequence:
>603_bases GTGCGACGGGCCTTCCAGGACCTGGTGGCCGAGGGGATCGTGTACCGGGTTCCCGGCCGGGGCACCTATGCGCGGGAGAC CGGACGCTATCTGCGTCAACTTGGTTCCATCGAGGATCTGATGAGCCTGTCGCAGGACACCACGATGGAGGTGCTCCGGG GGCTGACGCGGCGGGTCGACATCCAGGCCGCGAGCCGGCTGCGGCTCGACGACGACGTCGTGCACACCGTGGTGTTCCGC AGGCTGCACGGACCACCGGGCCAGGGTGTGCCGTTCGTGTCGACGACCGTGCACCTGCCCCCGTCGATCGCCCGCCACAT CGCCGGCGACGATGCACTGCAGACCGGCGCGGTGAGCACCCACACCGTCATCGGCCTGCTCGAACCACACCTCGACGCGC CCATCGCCCAAGCGGCACAGTCGATCACCGTCGCGCCCGCCGACGAGGCCGTCGCAGGCGCGGTCGGCTGCGCCCCCGGG CATCCGATGCTGCGCGTCGACCGGCTCTACTCCGACGATGCGGATCGGCCGGTCGAGCTGTCGGTCAGCCACTTCCTGCC CGAGCAGTACACCTACCGGGTGACGTTGCGCCGCTCGGGTTGA
Upstream 100 bases:
>100_bases GCAACTGCGCGGCGAGATCGCCGCAGGCCGCTACCGCGGCGGGCTCCGACTGCCCACCGAATCCGAACTCGTCACCCGAC ACGGTCTTTCGCGCCAGACG
Downstream 100 bases:
>100_bases GGCGATTTCGGCGTGGCTGGTTGCGCTGAGCGCGACTGCGCACGCCGAAATCACTAGGTGGCGGCCGTGGCGGCGATGCT GCCGAGCAGTTTGAGCGCAT
Product: GntR family transcriptional regulator
Products: protein N6-(lipoyl)lysine; NADH; H+
Alternate protein names: Regulatory Protein GntR HTH
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRRAFQDLVAEGIVYRVPGRGTYARETGRYLRQLGSIEDLMSLSQDTTMEVLRGLTRRVDIQAASRLRLDDDVVHTVVFR RLHGPPGQGVPFVSTTVHLPPSIARHIAGDDALQTGAVSTHTVIGLLEPHLDAPIAQAAQSITVAPADEAVAGAVGCAPG HPMLRVDRLYSDDADRPVELSVSHFLPEQYTYRVTLRRSG
Sequences:
>Translated_200_residues MRRAFQDLVAEGIVYRVPGRGTYARETGRYLRQLGSIEDLMSLSQDTTMEVLRGLTRRVDIQAASRLRLDDDVVHTVVFR RLHGPPGQGVPFVSTTVHLPPSIARHIAGDDALQTGAVSTHTVIGLLEPHLDAPIAQAAQSITVAPADEAVAGAVGCAPG HPMLRVDRLYSDDADRPVELSVSHFLPEQYTYRVTLRRSG >Mature_200_residues MRRAFQDLVAEGIVYRVPGRGTYARETGRYLRQLGSIEDLMSLSQDTTMEVLRGLTRRVDIQAASRLRLDDDVVHTVVFR RLHGPPGQGVPFVSTTVHLPPSIARHIAGDDALQTGAVSTHTVIGLLEPHLDAPIAQAAQSITVAPADEAVAGAVGCAPG HPMLRVDRLYSDDADRPVELSVSHFLPEQYTYRVTLRRSG
Specific function: Unknown
COG id: COG2188
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.1.4
Molecular weight: Translated: 21811; Mature: 21811
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAFQDLVAEGIVYRVPGRGTYARETGRYLRQLGSIEDLMSLSQDTTMEVLRGLTRRVD CCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH IQAASRLRLDDDVVHTVVFRRLHGPPGQGVPFVSTTVHLPPSIARHIAGDDALQTGAVST HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHCCCCCH HTVIGLLEPHLDAPIAQAAQSITVAPADEAVAGAVGCAPGHPMLRVDRLYSDDADRPVEL HHHHHHHCCCCCCHHHHHHHHEECCCCCHHHHHHCCCCCCCCCEEEHHHHCCCCCCCEEE SVSHFLPEQYTYRVTLRRSG EHHHHCCCCEEEEEEEEECC >Mature Secondary Structure MRRAFQDLVAEGIVYRVPGRGTYARETGRYLRQLGSIEDLMSLSQDTTMEVLRGLTRRVD CCHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH IQAASRLRLDDDVVHTVVFRRLHGPPGQGVPFVSTTVHLPPSIARHIAGDDALQTGAVST HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHCCCCCH HTVIGLLEPHLDAPIAQAAQSITVAPADEAVAGAVGCAPGHPMLRVDRLYSDDADRPVEL HHHHHHHCCCCCCHHHHHHHHEECCCCCHHHHHHCCCCCCCCCEEEHHHHCCCCCCCEEE SVSHFLPEQYTYRVTLRRSG EHHHHCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N6-(dihydrolipoyl)lysine; NAD+
Specific reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA