Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

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The map label for this gene is ydfG [C]

Identifier: 108797159

GI number: 108797159

Start: 198940

End: 199683

Strand: Reverse

Name: ydfG [C]

Synonym: Mmcs_0179

Alternate gene names: 108797159

Gene position: 199683-198940 (Counterclockwise)

Preceding gene: 108797161

Following gene: 108797153

Centisome position: 3.5

GC content: 71.91

Gene sequence:

>744_bases
ATGCTGGGGCACATGACTGATTCGAAGATCATCCTCGTCACCGGCGCCAGCAGCGGGATCGGCGCCGCCGTCGCCACCCA
CCTCGCCCGCGCCGGCCACCATGTCATCGCCGGCGCGCGCCGCGAGGACCGCCTGCGCGAACTCGCCGACGGCGCCGCCG
ATCTCGAGCGCGGCAGCCTGTCGGTGCGCCGGCTCGACGTCACCGACCGCGCCGAGATGGCGGCCTTCGTCGACGACGCC
GTGTCCACTCACGGCCGTCTCGATGTCCTCGTCAACAACGCCGGGATCATGCCCCTGTCGCGGCTCGACGCCCTGCTGGT
CGACCAGTGGGACGCCATGATCGACGTCAACGTCCGGGGCCTGCTCAACGGCATCGCCGCGGCGCTGCCGCACTTCCACC
GGCTCGGCGGCGGACACTTCGTGACCGTGGCCTCGATCGGCGCCCACGAGGTGGTGCCCACGTCCGCGGTGTACAGCGCC
ACCAAGTACGCCGCGTGGGCGATCACCGAGGGCCTGCGCCAGGAGTCCGACCCCTCGATCCGCGTCACGACCGTCTCCCC
CGGCGTGGTGGAGTCCGAGCTCGCGAGCACCATCACCGATCCCGGCGCCGCGGCGGCGATGCAGGAGTACCGGGCCGCCG
CGATCACACCGGACGCGATCGCCCGAGCCATCGCCTACGCGATCTCCGAACCCGAGGAGGTCGATGTCAACGAGGTGATC
GTGCGGCCGGCGCGCCAGCGCTGA

Upstream 100 bases:

>100_bases
AGTTCGGCCATATCCCCACGATAAGGGCGAGACGGGGCCGGCGCCTGGGTGTGCTGCACCCAGGCACACCGCATCCTGGT
TGCGCGCCGCGCACCACACG

Downstream 100 bases:

>100_bases
CCGCGTTGGCACTTCTGCGCATCACCGATCAATCGCTGCCACGGGAACAAAACCCGGTATCCGTCCCGTTTGACACTGCG
GACCGGTCATCACTGACCGC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLGHMTDSKIILVTGASSGIGAAVATHLARAGHHVIAGARREDRLRELADGAADLERGSLSVRRLDVTDRAEMAAFVDDA
VSTHGRLDVLVNNAGIMPLSRLDALLVDQWDAMIDVNVRGLLNGIAAALPHFHRLGGGHFVTVASIGAHEVVPTSAVYSA
TKYAAWAITEGLRQESDPSIRVTTVSPGVVESELASTITDPGAAAAMQEYRAAAITPDAIARAIAYAISEPEEVDVNEVI
VRPARQR

Sequences:

>Translated_247_residues
MLGHMTDSKIILVTGASSGIGAAVATHLARAGHHVIAGARREDRLRELADGAADLERGSLSVRRLDVTDRAEMAAFVDDA
VSTHGRLDVLVNNAGIMPLSRLDALLVDQWDAMIDVNVRGLLNGIAAALPHFHRLGGGHFVTVASIGAHEVVPTSAVYSA
TKYAAWAITEGLRQESDPSIRVTTVSPGVVESELASTITDPGAAAAMQEYRAAAITPDAIARAIAYAISEPEEVDVNEVI
VRPARQR
>Mature_247_residues
MLGHMTDSKIILVTGASSGIGAAVATHLARAGHHVIAGARREDRLRELADGAADLERGSLSVRRLDVTDRAEMAAFVDDA
VSTHGRLDVLVNNAGIMPLSRLDALLVDQWDAMIDVNVRGLLNGIAAALPHFHRLGGGHFVTVASIGAHEVVPTSAVYSA
TKYAAWAITEGLRQESDPSIRVTTVSPGVVESELASTITDPGAAAAMQEYRAAAITPDAIARAIAYAISEPEEVDVNEVI
VRPARQR

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=251, Percent_Identity=36.2549800796813, Blast_Score=133, Evalue=1e-31,
Organism=Homo sapiens, GI7706318, Length=202, Percent_Identity=34.1584158415842, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI32483357, Length=242, Percent_Identity=29.7520661157025, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI223718074, Length=169, Percent_Identity=37.8698224852071, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI20149619, Length=232, Percent_Identity=28.0172413793103, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI7657478, Length=206, Percent_Identity=29.6116504854369, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=30.8080808080808, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI5031737, Length=198, Percent_Identity=30.8080808080808, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI126723191, Length=186, Percent_Identity=31.7204301075269, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI19923817, Length=202, Percent_Identity=26.2376237623762, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI126723750, Length=211, Percent_Identity=27.4881516587678, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI66933014, Length=188, Percent_Identity=31.3829787234043, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI10190746, Length=260, Percent_Identity=27.6923076923077, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI44680136, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI44680133, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI17738292, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI32455239, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI5031765, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI142976729, Length=188, Percent_Identity=27.6595744680851, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI40548397, Length=200, Percent_Identity=30, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI214010158, Length=200, Percent_Identity=30, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI214010156, Length=200, Percent_Identity=30, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI22758144, Length=200, Percent_Identity=30, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1787820, Length=241, Percent_Identity=30.7053941908714, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI87082100, Length=200, Percent_Identity=33.5, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786812, Length=192, Percent_Identity=32.2916666666667, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787335, Length=226, Percent_Identity=28.3185840707965, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786701, Length=244, Percent_Identity=27.4590163934426, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788459, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082160, Length=199, Percent_Identity=28.1407035175879, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787905, Length=205, Percent_Identity=25.8536585365854, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789208, Length=195, Percent_Identity=28.7179487179487, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790717, Length=207, Percent_Identity=28.0193236714976, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=245, Percent_Identity=27.7551020408163, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17560676, Length=234, Percent_Identity=25.6410256410256, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=191, Percent_Identity=33.5078534031414, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=191, Percent_Identity=30.8900523560209, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=243, Percent_Identity=30.8641975308642, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71997402, Length=228, Percent_Identity=26.7543859649123, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=245, Percent_Identity=28.1632653061224, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=207, Percent_Identity=32.8502415458937, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=233, Percent_Identity=30.4721030042918, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=245, Percent_Identity=26.1224489795918, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=234, Percent_Identity=31.1965811965812, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=212, Percent_Identity=26.4150943396226, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=191, Percent_Identity=29.8429319371728, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17560220, Length=208, Percent_Identity=27.8846153846154, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71982365, Length=178, Percent_Identity=26.4044943820225, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=191, Percent_Identity=29.8429319371728, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193204405, Length=220, Percent_Identity=30, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323882, Length=246, Percent_Identity=30.0813008130081, Blast_Score=114, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6322226, Length=206, Percent_Identity=28.6407766990291, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=225, Percent_Identity=29.7777777777778, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322067, Length=194, Percent_Identity=34.5360824742268, Blast_Score=72, Evalue=9e-14,
Organism=Drosophila melanogaster, GI116007236, Length=244, Percent_Identity=34.4262295081967, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24641388, Length=253, Percent_Identity=33.9920948616601, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281364494, Length=253, Percent_Identity=33.596837944664, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI28571526, Length=193, Percent_Identity=36.2694300518135, Blast_Score=111, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24641232, Length=248, Percent_Identity=32.258064516129, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24663911, Length=253, Percent_Identity=30.8300395256917, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI21358495, Length=232, Percent_Identity=31.4655172413793, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24648944, Length=247, Percent_Identity=29.9595141700405, Blast_Score=100, Evalue=8e-22,
Organism=Drosophila melanogaster, GI21357041, Length=193, Percent_Identity=33.160621761658, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI116007234, Length=246, Percent_Identity=31.3008130081301, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI116007238, Length=172, Percent_Identity=37.7906976744186, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24648693, Length=249, Percent_Identity=30.9236947791165, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21355889, Length=249, Percent_Identity=30.9236947791165, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24644339, Length=187, Percent_Identity=28.3422459893048, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571387, Length=246, Percent_Identity=28.0487804878049, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24643142, Length=201, Percent_Identity=32.8358208955224, Blast_Score=84, Evalue=6e-17,
Organism=Drosophila melanogaster, GI23397609, Length=192, Percent_Identity=33.8541666666667, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI281364892, Length=197, Percent_Identity=31.9796954314721, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355319, Length=241, Percent_Identity=26.5560165975104, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI21355631, Length=181, Percent_Identity=28.1767955801105, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24580925, Length=239, Percent_Identity=29.2887029288703, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24649181, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007232, Length=175, Percent_Identity=33.1428571428571, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24665247, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI221331216, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21356301, Length=229, Percent_Identity=29.2576419213974, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24665243, Length=195, Percent_Identity=27.6923076923077, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI221331218, Length=195, Percent_Identity=27.6923076923077, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26038; Mature: 26038

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00061 ADH_SHORT ; PS00147 ARGINASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MLGHMTDSKIILVTGASSGIGAAVATHLARAGHHVIAGARREDRLRELADGAADLERGSL
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCHHHHCCCCC
SVRRLDVTDRAEMAAFVDDAVSTHGRLDVLVNNAGIMPLSRLDALLVDQWDAMIDVNVRG
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEHHHH
LLNGIAAALPHFHRLGGGHFVTVASIGAHEVVPTSAVYSATKYAAWAITEGLRQESDPSI
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
RVTTVSPGVVESELASTITDPGAAAAMQEYRAAAITPDAIARAIAYAISEPEEVDVNEVI
EEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
VRPARQR
HCCCCCC
>Mature Secondary Structure
MLGHMTDSKIILVTGASSGIGAAVATHLARAGHHVIAGARREDRLRELADGAADLERGSL
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCHHHHCCCCC
SVRRLDVTDRAEMAAFVDDAVSTHGRLDVLVNNAGIMPLSRLDALLVDQWDAMIDVNVRG
EEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEHHHH
LLNGIAAALPHFHRLGGGHFVTVASIGAHEVVPTSAVYSATKYAAWAITEGLRQESDPSI
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
RVTTVSPGVVESELASTITDPGAAAAMQEYRAAAITPDAIARAIAYAISEPEEVDVNEVI
EEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
VRPARQR
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA