Click here to switch to the map view.

The map label for this gene is 108797101

Identifier: 108797101

GI number: 108797101

Start: 136331

End: 137977

Strand: Direct

Name: 108797101

Synonym: Mmcs_0121

Alternate gene names: NA

Gene position: 136331-137977 (Clockwise)

Preceding gene: 108797100

Following gene: 108797102

Centisome position: 2.39

GC content: 67.03

Gene sequence:

>1647_bases
ATGTCAACGATCTTCAACGTGCGGAACATGAAGATGCCGACGTTGTCACGCGCTTCGGTGATCATCGGCACGCTTGTCGT
GGTGCTGGCGCTGGTGGCCGCGTTCGCGGGCTGGCAGCTGTACAAGAGGCTGTCCACGAACACCGTCGTGGCGTACTTCT
CCGACACCCTGGCGCTGTACCCCGGCGACAAGGTGCAGATCATGGGTGTGCGGGTCGGCACGATCGACAAGATCGAACCG
GCGGGCGACAAGATGAAGGTGACCTTCAGCTACGAGTCGAAGTACAAGGTGCCCGCGAACGCCACCGCGTCGATCCTCAA
CCCGAGCCTGGTGGCCTCGCGCACCATTCAGCTGGCCCCGCCGTACACCGGCGGCCCGGTCATGGAGGATGACGCGGTCA
TCCCGATCGACCGCACCCAGGTGCCCGTCGAGTACGACGAGCTGCGTGACTCGCTCGACCGCATCCTCACCGACCTCGGC
CCCACGCCGGACCAGCCCAAGGGTCCGTTCGGTGACGTGATCGAGTCCTTCGCCGACGGTCTGTCCGGCAAGGGAAAGCA
GATCAACACGACGTTGAACAGCCTCTCGGAGGCGCTGACCACCCTCAACGAGGGCCGCGGTGACTTCTTCAGCGTGGTCA
AGAGCCTCGCGTTGTTCGTCAACGCGCTCTACCGCAGCGATCAGCAGTTCGTCGCCCTCAATGACGACCTGGCGCAGTTC
ACCAACTCGTTCACCAACACCGACCGCGAGCTGGCGACCGCGCTGCAGGACCTCAACGAGCTGCTCACCACCACGCGCGG
GTTCCTCGACGAGAACAGTGAGGTCCTGACCAAGGACATCAACAACCTCGCCGACGTGACCAACGCGATCCTGCAGCCCG
AACCGCTCGACGGTCTGGAAACGGGTCTGCACGTGTTACCGAACCTGGGCGGCAACATCCTCAACATCAGCTCACCGGTC
AACGGCGGCATCGTCGGTGTGCCGGTCATCAACGGCATGGCCAACCCGATGCAGTTCATCTGCAGTTCGATCCAGGCGGG
CAGCCGGCTGGGCTACCAGGAGTCGGCGGAACTGTGCGCGCAGTACCTGGCGCCGATCCTCGATGCGCTGAAGTTCAACT
TCCCGCCGTTCGGGTTGAACCAGATCAGCACGGCCATGACGTTGCCGAAGATGATCGCCTACTCCGAGGACCGGCTGCGC
CCGCCGCCGGGATACAAGGACACCACGGTGCCCGGCATCTTCTCCCGCGACACGTTGTTCTCCCACGGCAACCACGAGCC
CGGCTGGGTCGTCGCCCCGGGGATGCAGGGCGTCGACGTGCAGCCGTTCACCGCGAACATGCTGACGCCGCAGTCGCTGG
CCGCGCTGCTCGGCGGACCCGACGCGCCGATCCCGGGTGCACCGCCCGCGTTCGGCACCACGCGCGACGGCAACCTGCCC
GGCCCGCCGAACGCCTTCGACGAACGCAATCCGTTGCCGCCGCCGTGGTACCCGCAACCCGGCCCGCCGCCCGCACCCGC
CCCGGGTGTCATCCCGGGCGACCCCGGGGGCTCCCCGCTGTCGGGTCCGGCGCCAGGACCCGCGCCCGCCGCGCAGGCAC
CCGCACCGGCAGGCCCGCCGTTGCCCGCTGAAGCAGGAGCGCCGTGA

Upstream 100 bases:

>100_bases
CGGGGCCGGGCCAGCAGCTGTCGCCCGCCCAGACGGGTCCGCTGCCGGGCAATCCACCGTTCCTCCCGCCGGGATCTCAA
CAATGACGGGGGCCTGATCA

Downstream 100 bases:

>100_bases
TGAAGCACAGGATCCGTCGTCTCGCCACCCGCACGGTCGCGCTCGCCGTGGCCGCGGTGGTGCTGACGTCGTGCGGTTCG
TGGAAGGGCATCGCGAACGT

Product: virulence factor MCE-like protein

Products: NA

Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family D; MCE Family Protein; Mce Family D; MCE-Family Protein; Mammalian Cell Entry-Like Domain-Containing Protein; Virulence Factor MCE-Like Protein; Mammalian Cell Entry Related Domain Protein; MCE Family Lipoprotein LprM; Mce-Related Protein; MCE-Family; LOW QUALITY PROTEIN Protein

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSTIFNVRNMKMPTLSRASVIIGTLVVVLALVAAFAGWQLYKRLSTNTVVAYFSDTLALYPGDKVQIMGVRVGTIDKIEP
AGDKMKVTFSYESKYKVPANATASILNPSLVASRTIQLAPPYTGGPVMEDDAVIPIDRTQVPVEYDELRDSLDRILTDLG
PTPDQPKGPFGDVIESFADGLSGKGKQINTTLNSLSEALTTLNEGRGDFFSVVKSLALFVNALYRSDQQFVALNDDLAQF
TNSFTNTDRELATALQDLNELLTTTRGFLDENSEVLTKDINNLADVTNAILQPEPLDGLETGLHVLPNLGGNILNISSPV
NGGIVGVPVINGMANPMQFICSSIQAGSRLGYQESAELCAQYLAPILDALKFNFPPFGLNQISTAMTLPKMIAYSEDRLR
PPPGYKDTTVPGIFSRDTLFSHGNHEPGWVVAPGMQGVDVQPFTANMLTPQSLAALLGGPDAPIPGAPPAFGTTRDGNLP
GPPNAFDERNPLPPPWYPQPGPPPAPAPGVIPGDPGGSPLSGPAPGPAPAAQAPAPAGPPLPAEAGAP

Sequences:

>Translated_548_residues
MSTIFNVRNMKMPTLSRASVIIGTLVVVLALVAAFAGWQLYKRLSTNTVVAYFSDTLALYPGDKVQIMGVRVGTIDKIEP
AGDKMKVTFSYESKYKVPANATASILNPSLVASRTIQLAPPYTGGPVMEDDAVIPIDRTQVPVEYDELRDSLDRILTDLG
PTPDQPKGPFGDVIESFADGLSGKGKQINTTLNSLSEALTTLNEGRGDFFSVVKSLALFVNALYRSDQQFVALNDDLAQF
TNSFTNTDRELATALQDLNELLTTTRGFLDENSEVLTKDINNLADVTNAILQPEPLDGLETGLHVLPNLGGNILNISSPV
NGGIVGVPVINGMANPMQFICSSIQAGSRLGYQESAELCAQYLAPILDALKFNFPPFGLNQISTAMTLPKMIAYSEDRLR
PPPGYKDTTVPGIFSRDTLFSHGNHEPGWVVAPGMQGVDVQPFTANMLTPQSLAALLGGPDAPIPGAPPAFGTTRDGNLP
GPPNAFDERNPLPPPWYPQPGPPPAPAPGVIPGDPGGSPLSGPAPGPAPAAQAPAPAGPPLPAEAGAP
>Mature_547_residues
STIFNVRNMKMPTLSRASVIIGTLVVVLALVAAFAGWQLYKRLSTNTVVAYFSDTLALYPGDKVQIMGVRVGTIDKIEPA
GDKMKVTFSYESKYKVPANATASILNPSLVASRTIQLAPPYTGGPVMEDDAVIPIDRTQVPVEYDELRDSLDRILTDLGP
TPDQPKGPFGDVIESFADGLSGKGKQINTTLNSLSEALTTLNEGRGDFFSVVKSLALFVNALYRSDQQFVALNDDLAQFT
NSFTNTDRELATALQDLNELLTTTRGFLDENSEVLTKDINNLADVTNAILQPEPLDGLETGLHVLPNLGGNILNISSPVN
GGIVGVPVINGMANPMQFICSSIQAGSRLGYQESAELCAQYLAPILDALKFNFPPFGLNQISTAMTLPKMIAYSEDRLRP
PPGYKDTTVPGIFSRDTLFSHGNHEPGWVVAPGMQGVDVQPFTANMLTPQSLAALLGGPDAPIPGAPPAFGTTRDGNLPG
PPNAFDERNPLPPPWYPQPGPPPAPAPGVIPGDPGGSPLSGPAPGPAPAAQAPAPAGPPLPAEAGAP

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57880; Mature: 57749

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIFNVRNMKMPTLSRASVIIGTLVVVLALVAAFAGWQLYKRLSTNTVVAYFSDTLALY
CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEC
PGDKVQIMGVRVGTIDKIEPAGDKMKVTFSYESKYKVPANATASILNPSLVASRTIQLAP
CCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHHHHCEEEECC
PYTGGPVMEDDAVIPIDRTQVPVEYDELRDSLDRILTDLGPTPDQPKGPFGDVIESFADG
CCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
LSGKGKQINTTLNSLSEALTTLNEGRGDFFSVVKSLALFVNALYRSDQQFVALNDDLAQF
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH
TNSFTNTDRELATALQDLNELLTTTRGFLDENSEVLTKDINNLADVTNAILQPEPLDGLE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
TGLHVLPNLGGNILNISSPVNGGIVGVPVINGMANPMQFICSSIQAGSRLGYQESAELCA
HHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
QYLAPILDALKFNFPPFGLNQISTAMTLPKMIAYSEDRLRPPPGYKDTTVPGIFSRDTLF
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCHHH
SHGNHEPGWVVAPGMQGVDVQPFTANMLTPQSLAALLGGPDAPIPGAPPAFGTTRDGNLP
HCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GPPNAFDERNPLPPPWYPQPGPPPAPAPGVIPGDPGGSPLSGPAPGPAPAAQAPAPAGPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPAEAGAP
CCCCCCCC
>Mature Secondary Structure 
STIFNVRNMKMPTLSRASVIIGTLVVVLALVAAFAGWQLYKRLSTNTVVAYFSDTLALY
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEC
PGDKVQIMGVRVGTIDKIEPAGDKMKVTFSYESKYKVPANATASILNPSLVASRTIQLAP
CCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCHHHHHCEEEECC
PYTGGPVMEDDAVIPIDRTQVPVEYDELRDSLDRILTDLGPTPDQPKGPFGDVIESFADG
CCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
LSGKGKQINTTLNSLSEALTTLNEGRGDFFSVVKSLALFVNALYRSDQQFVALNDDLAQF
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHH
TNSFTNTDRELATALQDLNELLTTTRGFLDENSEVLTKDINNLADVTNAILQPEPLDGLE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
TGLHVLPNLGGNILNISSPVNGGIVGVPVINGMANPMQFICSSIQAGSRLGYQESAELCA
HHHHHHHCCCCCEEEECCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
QYLAPILDALKFNFPPFGLNQISTAMTLPKMIAYSEDRLRPPPGYKDTTVPGIFSRDTLF
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCHHH
SHGNHEPGWVVAPGMQGVDVQPFTANMLTPQSLAALLGGPDAPIPGAPPAFGTTRDGNLP
HCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GPPNAFDERNPLPPPWYPQPGPPPAPAPGVIPGDPGGSPLSGPAPGPAPAAQAPAPAGPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPAEAGAP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA