| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797102
Identifier: 108797102
GI number: 108797102
Start: 137977
End: 139125
Strand: Direct
Name: 108797102
Synonym: Mmcs_0122
Alternate gene names: NA
Gene position: 137977-139125 (Clockwise)
Preceding gene: 108797101
Following gene: 108797103
Centisome position: 2.42
GC content: 67.19
Gene sequence:
>1149_bases ATGAAGCACAGGATCCGTCGTCTCGCCACCCGCACGGTCGCGCTCGCCGTGGCCGCGGTGGTGCTGACGTCGTGCGGTTC GTGGAAGGGCATCGCGAACGTGCCGTTGCCCGGCGGTCCGGGCACCGGCGGCGATGCCATGACGGTGTACGTCCAGATGC CGGACACGTTGGCGCTCAACGTCAACAGCCGGGTCCGGGTGGCCGACGTCTTCGTCGGGACCGTCCGCGCGATCGAGCTG AAGAACTGGGTCGCAACCCTCAAGCTGGGCATCCAGCCGGGTGTCGAACTGCCGTCCAACGCGCTGGCCAAGATCGGTCA GACCAGCCTCCTGGGGTCCCAGCACGTCGAGCTGGAGGCACCACCGGATCCGTCGTCGGAGCCGCTTCGCGACGGGGACA CCATCCCGCTGAAGAACGCCTCGGCGTTCCCCACCACCGAGCGGGTGCTCGCCAGCATCGCGACGATCCTGCGCGGCGGA GGCATCCCCAACCTCGAGGTGATCCAGACCGAGGTGAACAACCTGCTGACCGGGCGGGCGGAGCAGATCCGCGAGTTCCT CGGCCGGCTCGACGTGTTCACCGACGAGCTCAACCAGCAGCGTGAAGACCTCACCCGCGCCATCGACTCGACGAACCGGT TGCTCAACATCGTGGCGAGCCGCAACGACACCCTCGACCGTGTGCTCACCGAGTTCCCGCCGCTGATCGAGCACTTCGCC GAGACGCGGGATCTGTTCGCCGACGCCGTGATCGCGGTGGGCCGCATCAGCCGCGCGGCCGACACCTACCTCGGCCAGGC CCAGGACCCCCTGAACACCAACCTGCAGAACCTGCAGCGTCCGCTCAAGCAGCTCGCTCGTTCCTCGCCGTACCTGATCG GCGCGCTGAAGCTGATGCTGACCGCACCGTTCAGCATCGAGAACGTGCCGAAGGTGGTCCGCGGTGACTACATCAACGTG TCGCTGAACGTGGACCTGACGCTGTCGGCAATCGACAACGGCATCCTCACCGGCACCGGTGTGTCGGGCATGCTCCGGGC GCTGGAACAGGCATGGGGTCGTGATCCGGCGACGATGATCCCGGATGTGCGCTTCACGCCGAACGCGCACAGCGCACCGA ACGGACCGCTGGTCGAAAGGGGTGAGTGA
Upstream 100 bases:
>100_bases GGGGCTCCCCGCTGTCGGGTCCGGCGCCAGGACCCGCGCCCGCCGCGCAGGCACCCGCACCGGCAGGCCCGCCGTTGCCC GCTGAAGCAGGAGCGCCGTG
Downstream 100 bases:
>100_bases GCAGTGCTGACTCGCTTCATCAAGATCCAGCTGATCATCTTCACCGTGCTGACGGTGATCGCACTCGTGGCGCTGGGCTG GTACTACCTGCGGGTGCCGA
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE Family Protein; Mce Family Lipoe; Mammalian Cell Entry Related Domain Protein; MCE Family Lipoprotein LprM; Mce Related Protein; MCE Family Lipoprotein LprN; Mce Family Protein Mce5E; MCE-Family Lipoprotein LprL; MCE Family Lipoprotein; MCE Family Lipoprotein LprK; Mce-Related Protein; LprM Protein; MCE-Family Protein LprN; MCE-Family LipoE; Fis Family Transcriptional Regulator; Lipoprotein
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKHRIRRLATRTVALAVAAVVLTSCGSWKGIANVPLPGGPGTGGDAMTVYVQMPDTLALNVNSRVRVADVFVGTVRAIEL KNWVATLKLGIQPGVELPSNALAKIGQTSLLGSQHVELEAPPDPSSEPLRDGDTIPLKNASAFPTTERVLASIATILRGG GIPNLEVIQTEVNNLLTGRAEQIREFLGRLDVFTDELNQQREDLTRAIDSTNRLLNIVASRNDTLDRVLTEFPPLIEHFA ETRDLFADAVIAVGRISRAADTYLGQAQDPLNTNLQNLQRPLKQLARSSPYLIGALKLMLTAPFSIENVPKVVRGDYINV SLNVDLTLSAIDNGILTGTGVSGMLRALEQAWGRDPATMIPDVRFTPNAHSAPNGPLVERGE
Sequences:
>Translated_382_residues MKHRIRRLATRTVALAVAAVVLTSCGSWKGIANVPLPGGPGTGGDAMTVYVQMPDTLALNVNSRVRVADVFVGTVRAIEL KNWVATLKLGIQPGVELPSNALAKIGQTSLLGSQHVELEAPPDPSSEPLRDGDTIPLKNASAFPTTERVLASIATILRGG GIPNLEVIQTEVNNLLTGRAEQIREFLGRLDVFTDELNQQREDLTRAIDSTNRLLNIVASRNDTLDRVLTEFPPLIEHFA ETRDLFADAVIAVGRISRAADTYLGQAQDPLNTNLQNLQRPLKQLARSSPYLIGALKLMLTAPFSIENVPKVVRGDYINV SLNVDLTLSAIDNGILTGTGVSGMLRALEQAWGRDPATMIPDVRFTPNAHSAPNGPLVERGE >Mature_382_residues MKHRIRRLATRTVALAVAAVVLTSCGSWKGIANVPLPGGPGTGGDAMTVYVQMPDTLALNVNSRVRVADVFVGTVRAIEL KNWVATLKLGIQPGVELPSNALAKIGQTSLLGSQHVELEAPPDPSSEPLRDGDTIPLKNASAFPTTERVLASIATILRGG GIPNLEVIQTEVNNLLTGRAEQIREFLGRLDVFTDELNQQREDLTRAIDSTNRLLNIVASRNDTLDRVLTEFPPLIEHFA ETRDLFADAVIAVGRISRAADTYLGQAQDPLNTNLQNLQRPLKQLARSSPYLIGALKLMLTAPFSIENVPKVVRGDYINV SLNVDLTLSAIDNGILTGTGVSGMLRALEQAWGRDPATMIPDVRFTPNAHSAPNGPLVERGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41174; Mature: 41174
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHRIRRLATRTVALAVAAVVLTSCGSWKGIANVPLPGGPGTGGDAMTVYVQMPDTLALN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE VNSRVRVADVFVGTVRAIELKNWVATLKLGIQPGVELPSNALAKIGQTSLLGSQHVELEA CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCCCEEEEC PPDPSSEPLRDGDTIPLKNASAFPTTERVLASIATILRGGGIPNLEVIQTEVNNLLTGRA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH EQIREFLGRLDVFTDELNQQREDLTRAIDSTNRLLNIVASRNDTLDRVLTEFPPLIEHFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHH ETRDLFADAVIAVGRISRAADTYLGQAQDPLNTNLQNLQRPLKQLARSSPYLIGALKLML HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH TAPFSIENVPKVVRGDYINVSLNVDLTLSAIDNGILTGTGVSGMLRALEQAWGRDPATMI CCCCCHHCCCHHHCCCEEEEEEEEEEEEEECCCCCEECCCHHHHHHHHHHHHCCCCCHHC PDVRFTPNAHSAPNGPLVERGE CCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MKHRIRRLATRTVALAVAAVVLTSCGSWKGIANVPLPGGPGTGGDAMTVYVQMPDTLALN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEE VNSRVRVADVFVGTVRAIELKNWVATLKLGIQPGVELPSNALAKIGQTSLLGSQHVELEA CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHCCCCCEEEEC PPDPSSEPLRDGDTIPLKNASAFPTTERVLASIATILRGGGIPNLEVIQTEVNNLLTGRA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH EQIREFLGRLDVFTDELNQQREDLTRAIDSTNRLLNIVASRNDTLDRVLTEFPPLIEHFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHH ETRDLFADAVIAVGRISRAADTYLGQAQDPLNTNLQNLQRPLKQLARSSPYLIGALKLML HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH TAPFSIENVPKVVRGDYINVSLNVDLTLSAIDNGILTGTGVSGMLRALEQAWGRDPATMI CCCCCHHCCCHHHCCCEEEEEEEEEEEEEECCCCCEECCCHHHHHHHHHHHHCCCCCHHC PDVRFTPNAHSAPNGPLVERGE CCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA