| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763979
Identifier: 108763979
GI number: 108763979
Start: 4039087
End: 4040172
Strand: Direct
Name: 108763979
Synonym: MXAN_3463
Alternate gene names: NA
Gene position: 4039087-4040172 (Clockwise)
Preceding gene: 108760552
Following gene: 108760667
Centisome position: 44.19
GC content: 66.57
Gene sequence:
>1086_bases ATGAATTCTTCCAATCCCCAGGCGGGACCCATTCCCGCCGATGACCCCCGGTGGCTGCGGTCGGAGCTGCGCCGGGTGAT GCCGCCGGAGTCCTTCCAGCCGCAGCCCCTGCGAGGCATCGTCGCGTTCGGGCTGGTTCCGGTGATGGTGGTCTTGATGT GGGCCGCGGGAAGCGGGCGGCTGCCATGGTGGGCGTGCCTGCTCATTTCGTTCGCGCTCGGGCAGATGGTGACGGCCGTG GGGCTGGCGGCGCATGAGGCGCTGCACCACGCGGTGTTCCGCAGCAGGGCGCTGGAGAGTCTCCTGGGCTGGGTGGGCTT CAGCCCGTTCCTGGTGACCCCCGGGAACTGGCGGGCGTGGCACGTCCAGGCACACCACAGCGCGGCGAACGTCCTGGTTC GAGATCCGGACATCCTGCCGCGTCAGAGCGAGTGGCGGACCCAGTGGTTCGCGAAGGTGTTCCACGCGATGTCCCCGGGC TCGGGCTCGTTGCTGAGCTTCGTCAGCTTCAGCTTCTTCTTCACCGCCCAGGGACAGGCCTTCCTCTGGCACCACAGCCG GCTGCCGCAGTTCAAGCATGTGCACATGCATCGAACGCGGGAGCGCGTCCTCACGGTGCTCGTGATGGTGGGGTGGGGCG CGGTGGGCTGGTGGATGGGGCCCATGGGGGCGCTCTATGCGCTCATCCTTCCGCTCCTCATCGGCAACATCACCTTGATG ATCTACATCGCCACCAACCATTGGCTGCTGGCCGCGCACGAGGAGTCGGACAACCCCTTCGTGAACACGGCCAGCGTGGC GACGCATCCGGTGATGGACTGGCTGCACTACAACTTCAGCCACCACCAGGAGCACCACATCTTCCCGGCCATGAGCCCGA AGTTCGCGCCGCTGCTTCGCAAGCACCTGCGCGATCTCAACCCCGAAGCGTCACAGGTGTACCCGCACCTGCACGCGCTC CGGATGCTGTACCGGCGCCCGGCGCTCTATGCCGAGGACGGACAGACGCTCATGGCACCGGAGGGGACGCCTGCGATTGC CACAGAGGACCTGCGCCGCCAACTCAAAGAGCCAATCGTGCTTTGA
Upstream 100 bases:
>100_bases CACCGTCGCTGCGCTCGACGAGGCGGGGCGGCTTCGGATGTTGCTCGAGGGCGGCCTTGCGCGGCCCATGGCTTGAGACC TCCTTCCTTCGGGTGAACGC
Downstream 100 bases:
>100_bases ACTTCTGCTGGGAGGTGATTAACGCGTGGCTTGTTGTGTGTCGGCCTTGCTCAGGCCGCTGACTCATTATGGAAATGGGC CAACCGCCAGCGGTTCCGAA
Product: fatty acid desaturase
Products: NA
Alternate protein names: Fatty Acid Desaturase Domain Protein
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MNSSNPQAGPIPADDPRWLRSELRRVMPPESFQPQPLRGIVAFGLVPVMVVLMWAAGSGRLPWWACLLISFALGQMVTAV GLAAHEALHHAVFRSRALESLLGWVGFSPFLVTPGNWRAWHVQAHHSAANVLVRDPDILPRQSEWRTQWFAKVFHAMSPG SGSLLSFVSFSFFFTAQGQAFLWHHSRLPQFKHVHMHRTRERVLTVLVMVGWGAVGWWMGPMGALYALILPLLIGNITLM IYIATNHWLLAAHEESDNPFVNTASVATHPVMDWLHYNFSHHQEHHIFPAMSPKFAPLLRKHLRDLNPEASQVYPHLHAL RMLYRRPALYAEDGQTLMAPEGTPAIATEDLRRQLKEPIVL
Sequences:
>Translated_361_residues MNSSNPQAGPIPADDPRWLRSELRRVMPPESFQPQPLRGIVAFGLVPVMVVLMWAAGSGRLPWWACLLISFALGQMVTAV GLAAHEALHHAVFRSRALESLLGWVGFSPFLVTPGNWRAWHVQAHHSAANVLVRDPDILPRQSEWRTQWFAKVFHAMSPG SGSLLSFVSFSFFFTAQGQAFLWHHSRLPQFKHVHMHRTRERVLTVLVMVGWGAVGWWMGPMGALYALILPLLIGNITLM IYIATNHWLLAAHEESDNPFVNTASVATHPVMDWLHYNFSHHQEHHIFPAMSPKFAPLLRKHLRDLNPEASQVYPHLHAL RMLYRRPALYAEDGQTLMAPEGTPAIATEDLRRQLKEPIVL >Mature_361_residues MNSSNPQAGPIPADDPRWLRSELRRVMPPESFQPQPLRGIVAFGLVPVMVVLMWAAGSGRLPWWACLLISFALGQMVTAV GLAAHEALHHAVFRSRALESLLGWVGFSPFLVTPGNWRAWHVQAHHSAANVLVRDPDILPRQSEWRTQWFAKVFHAMSPG SGSLLSFVSFSFFFTAQGQAFLWHHSRLPQFKHVHMHRTRERVLTVLVMVGWGAVGWWMGPMGALYALILPLLIGNITLM IYIATNHWLLAAHEESDNPFVNTASVATHPVMDWLHYNFSHHQEHHIFPAMSPKFAPLLRKHLRDLNPEASQVYPHLHAL RMLYRRPALYAEDGQTLMAPEGTPAIATEDLRRQLKEPIVL
Specific function: Unknown
COG id: COG3239
COG function: function code I; Fatty acid desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40870; Mature: 40870
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSNPQAGPIPADDPRWLRSELRRVMPPESFQPQPLRGIVAFGLVPVMVVLMWAAGSGR CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC LPWWACLLISFALGQMVTAVGLAAHEALHHAVFRSRALESLLGWVGFSPFLVTPGNWRAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE HVQAHHSAANVLVRDPDILPRQSEWRTQWFAKVFHAMSPGSGSLLSFVSFSFFFTAQGQA EEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCE FLWHHSRLPQFKHVHMHRTRERVLTVLVMVGWGAVGWWMGPMGALYALILPLLIGNITLM EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEE IYIATNHWLLAAHEESDNPFVNTASVATHPVMDWLHYNFSHHQEHHIFPAMSPKFAPLLR EEEECCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH KHLRDLNPEASQVYPHLHALRMLYRRPALYAEDGQTLMAPEGTPAIATEDLRRQLKEPIV HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCCCCCHHHHHHHHHCCCC L C >Mature Secondary Structure MNSSNPQAGPIPADDPRWLRSELRRVMPPESFQPQPLRGIVAFGLVPVMVVLMWAAGSGR CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC LPWWACLLISFALGQMVTAVGLAAHEALHHAVFRSRALESLLGWVGFSPFLVTPGNWRAW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE HVQAHHSAANVLVRDPDILPRQSEWRTQWFAKVFHAMSPGSGSLLSFVSFSFFFTAQGQA EEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCE FLWHHSRLPQFKHVHMHRTRERVLTVLVMVGWGAVGWWMGPMGALYALILPLLIGNITLM EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEE IYIATNHWLLAAHEESDNPFVNTASVATHPVMDWLHYNFSHHQEHHIFPAMSPKFAPLLR EEEECCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH KHLRDLNPEASQVYPHLHALRMLYRRPALYAEDGQTLMAPEGTPAIATEDLRRQLKEPIV HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEECCCCCCCCCHHHHHHHHHCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA