| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ygfG [C]
Identifier: 108763786
GI number: 108763786
Start: 6948007
End: 6948789
Strand: Reverse
Name: ygfG [C]
Synonym: MXAN_5593
Alternate gene names: 108763786
Gene position: 6948789-6948007 (Counterclockwise)
Preceding gene: 108762374
Following gene: 108762819
Centisome position: 76.03
GC content: 74.07
Gene sequence:
>783_bases GTGGAGCCCGTCGTCGCGACAGGTGCTTCGCTGAACGTCGAGGACCGCGACGACGGGGTCCGGGTGTTGACGCTGTCCAA CCCGGCTCGCCGCAACGCGCTCGATGACGGCCTTCTGGCGCGGCTGGACGCGGCGCTGGAGCCCGCCCCGCATGTGCGCG CCTTGCTGGTGCGCGGCGCGGGCGGGGCTTTCTGTTCCGGCTATGACTTGACGCACCTGGGCCCGCCGGGCGCGGGCGGA CGGCTGCCGGATGACTTGCTGGTGGAGTGCCTGTTGAAGCTGGAGTCCCATCCCGCGCCCAGTGTGGCGCTGGTGGAGGG CGCGGCGGTGGGCGCCGGCTTCGACCTGGCGGCCTCGTGCGACTTCCGCATTGGCACGCCCAACGCCGTCTTCCTCATGC CCCCAGCGAAGCTGGGCATCGTCTACTCCCCGGAGGGGCTGGCCCGTGCCGCGCGGCTGGTGGGCGTGGCGCGCGCCAAG CAGCTCTTCCTCGCGGCGCGGAAGCTGAGCGCGCGGGAGGCGCTGGAGTGGGGGCTGTTGGATGACTGCCTGGCGGACGC GGAGACGCGCGCGCTGGCGCTGTGCGCCACCCTGGCCGGCCATGCACCGCTGGCGGTGTCGGGGATGAAGGAGTCCTTCG GGCGCCTGGCTCGGGCCCCGTTGGAGGAGGCGGACCGGGCGCGGCTGCGCGGCTTGCGCGCGGCGGCCTTCGGGAGCGAG GACGCGAAGGAGGGGCGGGCGGCCTTCCTTGAAAAGCGCCCGCCCCGCTTCTCCGGCCGCTAG
Upstream 100 bases:
>100_bases TGCCCGTGGAGGCAGAGGATGGCGGGACGGTGAAGGAGATTCGGGTGAAGGAGGCGCAGTCGGTCAACGAGGGCGATGTC CTCGTGGTGCTCGGCTAGCA
Downstream 100 bases:
>100_bases TCAGGGCGGCCGGCGGGGCACTGCCACGGCGACATCAGGTATCGCCGAAGAGCTCGCCCATGCGCAGTTGCAGGGCCGAG GCAATCTTGTACAGCGAGGA
Product: enoyl-CoA hydratase/isomerase family protein
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MEPVVATGASLNVEDRDDGVRVLTLSNPARRNALDDGLLARLDAALEPAPHVRALLVRGAGGAFCSGYDLTHLGPPGAGG RLPDDLLVECLLKLESHPAPSVALVEGAAVGAGFDLAASCDFRIGTPNAVFLMPPAKLGIVYSPEGLARAARLVGVARAK QLFLAARKLSAREALEWGLLDDCLADAETRALALCATLAGHAPLAVSGMKESFGRLARAPLEEADRARLRGLRAAAFGSE DAKEGRAAFLEKRPPRFSGR
Sequences:
>Translated_260_residues MEPVVATGASLNVEDRDDGVRVLTLSNPARRNALDDGLLARLDAALEPAPHVRALLVRGAGGAFCSGYDLTHLGPPGAGG RLPDDLLVECLLKLESHPAPSVALVEGAAVGAGFDLAASCDFRIGTPNAVFLMPPAKLGIVYSPEGLARAARLVGVARAK QLFLAARKLSAREALEWGLLDDCLADAETRALALCATLAGHAPLAVSGMKESFGRLARAPLEEADRARLRGLRAAAFGSE DAKEGRAAFLEKRPPRFSGR >Mature_260_residues MEPVVATGASLNVEDRDDGVRVLTLSNPARRNALDDGLLARLDAALEPAPHVRALLVRGAGGAFCSGYDLTHLGPPGAGG RLPDDLLVECLLKLESHPAPSVALVEGAAVGAGFDLAASCDFRIGTPNAVFLMPPAKLGIVYSPEGLARAARLVGVARAK QLFLAARKLSAREALEWGLLDDCLADAETRALALCATLAGHAPLAVSGMKESFGRLARAPLEEADRARLRGLRAAAFGSE DAKEGRAAFLEKRPPRFSGR
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI213417737, Length=195, Percent_Identity=31.7948717948718, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI157694516, Length=195, Percent_Identity=31.7948717948718, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI31542718, Length=249, Percent_Identity=28.9156626506024, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI194097323, Length=254, Percent_Identity=29.1338582677165, Blast_Score=91, Evalue=9e-19, Organism=Homo sapiens, GI157694520, Length=154, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI4502327, Length=263, Percent_Identity=28.1368821292776, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI70995211, Length=220, Percent_Identity=29.0909090909091, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI68989263, Length=166, Percent_Identity=30.1204819277108, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI87082183, Length=253, Percent_Identity=31.2252964426877, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1787659, Length=253, Percent_Identity=33.201581027668, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI221142681, Length=264, Percent_Identity=32.1969696969697, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788597, Length=268, Percent_Identity=29.4776119402985, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787660, Length=262, Percent_Identity=33.206106870229, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1790281, Length=188, Percent_Identity=29.7872340425532, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788682, Length=188, Percent_Identity=28.1914893617021, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17536985, Length=229, Percent_Identity=26.2008733624454, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25145438, Length=246, Percent_Identity=27.2357723577236, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17554946, Length=248, Percent_Identity=29.0322580645161, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17534483, Length=269, Percent_Identity=25.2788104089219, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17560910, Length=263, Percent_Identity=25.4752851711027, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17540306, Length=240, Percent_Identity=28.3333333333333, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17540714, Length=199, Percent_Identity=26.1306532663317, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17535521, Length=191, Percent_Identity=27.2251308900524, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI20129971, Length=244, Percent_Identity=29.0983606557377, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24653477, Length=244, Percent_Identity=29.0983606557377, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24653139, Length=275, Percent_Identity=27.6363636363636, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI19922422, Length=250, Percent_Identity=25.6, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI19920382, Length=209, Percent_Identity=28.2296650717703, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357171, Length=178, Percent_Identity=24.7191011235955, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 27143; Mature: 27143
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPVVATGASLNVEDRDDGVRVLTLSNPARRNALDDGLLARLDAALEPAPHVRALLVRGA CCCCEECCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECC GGAFCSGYDLTHLGPPGAGGRLPDDLLVECLLKLESHPAPSVALVEGAAVGAGFDLAASC CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECC DFRIGTPNAVFLMPPAKLGIVYSPEGLARAARLVGVARAKQLFLAARKLSAREALEWGLL CEEECCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH DDCLADAETRALALCATLAGHAPLAVSGMKESFGRLARAPLEEADRARLRGLRAAAFGSE HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DAKEGRAAFLEKRPPRFSGR HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEPVVATGASLNVEDRDDGVRVLTLSNPARRNALDDGLLARLDAALEPAPHVRALLVRGA CCCCEECCCCCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECC GGAFCSGYDLTHLGPPGAGGRLPDDLLVECLLKLESHPAPSVALVEGAAVGAGFDLAASC CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECC DFRIGTPNAVFLMPPAKLGIVYSPEGLARAARLVGVARAKQLFLAARKLSAREALEWGLL CEEECCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH DDCLADAETRALALCATLAGHAPLAVSGMKESFGRLARAPLEEADRARLRGLRAAAFGSE HHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DAKEGRAAFLEKRPPRFSGR HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA