| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is gluP [H]
Identifier: 108762819
GI number: 108762819
Start: 6943918
End: 6945444
Strand: Reverse
Name: gluP [H]
Synonym: MXAN_5590
Alternate gene names: 108762819
Gene position: 6945444-6943918 (Counterclockwise)
Preceding gene: 108763786
Following gene: 108757551
Centisome position: 75.99
GC content: 73.94
Gene sequence:
>1527_bases ATGCGACTTGGGGGGGCGCCCTGGCTCACGTTGATCCTCGCCACCGTGCTGGTGGGTATCCACGGCGCGGCGCGAGCCGC GGGGCCGGTGGGGCTGGACACCCTGCTGCGGTGGGGCGCGAAGGCGGGGCCTCTGGTGGTGGACGCGGGCCAGGTCTGGC GGCTCGTCACCGCCCACTTCCTGCACCGGGACTTCCCCCACCTGGCGCTCAATGTCCTGGTGCTGTTGGCGGCGGGAAGC GGCCTGGAGCGCCTGTGCCGACGCCGGGACTACGCAGCGCTGCTGGTGGCGGCGGGGCTGGCCACCATGGCGGGCTCGCT CGGCAGCTCCGGGGGCGTGAGCGTGGGGGCTTCTGGGCTCGTGTATGCCTGTGTGGGTGCGCTGCTTGTCCTGGGCCGGC GTCACCGGGCGAAGCTGCCGGCGCGGTGGATGTCCAGCGAGGCCGCGGTGCCCACGGTGCTCGTCTTCCTATGGATGGGG TGGACGTCGGTAGGCGTGGACAACGCGGGGCACCTGGGCGGTTTGCTCGCGGGGCTGCTGGCCGGCGTCTTCCTGGAGCC GCGCTGGCACCCGGACACGGGCTGGCTGCGCCCGGTGGGGATGGTGGTGGCGGCGGTGGTGGTGACGGGGGGCGTGGTTG CGGAGCGCTCCGTCTGGCGCATGGAGCGGGATGACGGCTTTGGCCTCTCCGTGGCCCTGCCGCGCGACTGGCGGGGCGAC GTGGACGGGCAGGGCCGGCGGGCCTTCTCCAACGGACTGCCGGGGCGTGGCCGCGCGACCTTCTCGGCGGAGGCCATCGA GGCGGGGGAGCCAGGAGACGGCTCGGTCCAGGCGCGGCAGTTCCAGCAGGAGGTGCTGGTTCAGGGCGCTCCGAGCCCCG AGGGGCGGACGCTGAAGGTGACGGAGCCGGTGGCGGCGCGCGTGGGCGGGCGGAGCGCGCAGCGGCTGCATGCGGAGTTG GAGGGGCCAGGGGGGCCCACTCACCTGATGGCGCTCTTCGTGCCACGGGGGGAGTGGGTGTACCGGCTGGTGTTCACCTG GCCCGCGGCGTACCCCGCCTATCGCGAGGTGGTGGACCGGATGGTGGCGGAGGTCCGCTTCGACGAGCCGTCCGTCCTAC GCGAGGCGCGGGCTAGAGCGCTGCTCGTTCCGGGGGCGCCGGGACCGTTGCGCGCATTGGGCGGAGTGCTGCGCCGCCTG GGCCTTCCCAAGGAAGCAGTGGCGCCGTTGAGCGAGTCCGTGCGGTTGGCGCCCGCTCATGTGGAGACGCGTGTCGAACT GGCGCGCGCGTTCCTGGAGGCATCGCGCGTGGAGGAAGGGTGTCACGCCGCCGCGGAGGCGCGGGTGTACGGGCCTTGGG ACACGGGCGCGTTGGAGGCGGGTGTGCGCTGTGAGCTGTCACGCGGCAACGTCGAGCGGGCCCTGGAGCGCCTGGTGGAA GCGCGCCGGGTGGACCCTCAGGATGCCCGACTGCGCGCGGCGGAACTCGCGCTGCGGACGGTGCTGGAGGCTGCGCCGCA TCGCTGA
Upstream 100 bases:
>100_bases TTTCCCTGTACAAGCCATGTATCCCCCTCAAAAGACACGACTTTCTCCCGAGGAAGAGGGGCAGCCGAGGCTGTTGTCCA TCGGTCAATCGGCCGGTGGA
Downstream 100 bases:
>100_bases AACCCAGGTCGGAAAATGTAGGCGAAACTCCTGAGAATCGTCGCAGATAACCCCAATGTAGGCCGAAGGCACACGCAGAG GGGGGACACCATGACGAGGA
Product: S54 family peptidase
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MRLGGAPWLTLILATVLVGIHGAARAAGPVGLDTLLRWGAKAGPLVVDAGQVWRLVTAHFLHRDFPHLALNVLVLLAAGS GLERLCRRRDYAALLVAAGLATMAGSLGSSGGVSVGASGLVYACVGALLVLGRRHRAKLPARWMSSEAAVPTVLVFLWMG WTSVGVDNAGHLGGLLAGLLAGVFLEPRWHPDTGWLRPVGMVVAAVVVTGGVVAERSVWRMERDDGFGLSVALPRDWRGD VDGQGRRAFSNGLPGRGRATFSAEAIEAGEPGDGSVQARQFQQEVLVQGAPSPEGRTLKVTEPVAARVGGRSAQRLHAEL EGPGGPTHLMALFVPRGEWVYRLVFTWPAAYPAYREVVDRMVAEVRFDEPSVLREARARALLVPGAPGPLRALGGVLRRL GLPKEAVAPLSESVRLAPAHVETRVELARAFLEASRVEEGCHAAAEARVYGPWDTGALEAGVRCELSRGNVERALERLVE ARRVDPQDARLRAAELALRTVLEAAPHR
Sequences:
>Translated_508_residues MRLGGAPWLTLILATVLVGIHGAARAAGPVGLDTLLRWGAKAGPLVVDAGQVWRLVTAHFLHRDFPHLALNVLVLLAAGS GLERLCRRRDYAALLVAAGLATMAGSLGSSGGVSVGASGLVYACVGALLVLGRRHRAKLPARWMSSEAAVPTVLVFLWMG WTSVGVDNAGHLGGLLAGLLAGVFLEPRWHPDTGWLRPVGMVVAAVVVTGGVVAERSVWRMERDDGFGLSVALPRDWRGD VDGQGRRAFSNGLPGRGRATFSAEAIEAGEPGDGSVQARQFQQEVLVQGAPSPEGRTLKVTEPVAARVGGRSAQRLHAEL EGPGGPTHLMALFVPRGEWVYRLVFTWPAAYPAYREVVDRMVAEVRFDEPSVLREARARALLVPGAPGPLRALGGVLRRL GLPKEAVAPLSESVRLAPAHVETRVELARAFLEASRVEEGCHAAAEARVYGPWDTGALEAGVRCELSRGNVERALERLVE ARRVDPQDARLRAAELALRTVLEAAPHR >Mature_508_residues MRLGGAPWLTLILATVLVGIHGAARAAGPVGLDTLLRWGAKAGPLVVDAGQVWRLVTAHFLHRDFPHLALNVLVLLAAGS GLERLCRRRDYAALLVAAGLATMAGSLGSSGGVSVGASGLVYACVGALLVLGRRHRAKLPARWMSSEAAVPTVLVFLWMG WTSVGVDNAGHLGGLLAGLLAGVFLEPRWHPDTGWLRPVGMVVAAVVVTGGVVAERSVWRMERDDGFGLSVALPRDWRGD VDGQGRRAFSNGLPGRGRATFSAEAIEAGEPGDGSVQARQFQQEVLVQGAPSPEGRTLKVTEPVAARVGGRSAQRLHAEL EGPGGPTHLMALFVPRGEWVYRLVFTWPAAYPAYREVVDRMVAEVRFDEPSVLREARARALLVPGAPGPLRALGGVLRRL GLPKEAVAPLSESVRLAPAHVETRVELARAFLEASRVEEGCHAAAEARVYGPWDTGALEAGVRCELSRGNVERALERLVE ARRVDPQDARLRAAELALRTVLEAAPHR
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 54094; Mature: 54094
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGGAPWLTLILATVLVGIHGAARAAGPVGLDTLLRWGAKAGPLVVDAGQVWRLVTAHF CCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHCCCCCCCEEEECHHHHHHHHHHH LHRDFPHLALNVLVLLAAGSGLERLCRRRDYAALLVAAGLATMAGSLGSSGGVSVGASGL HHCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH VYACVGALLVLGRRHRAKLPARWMSSEAAVPTVLVFLWMGWTSVGVDNAGHLGGLLAGLL HHHHHHHHHHHCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AGVFLEPRWHPDTGWLRPVGMVVAAVVVTGGVVAERSVWRMERDDGFGLSVALPRDWRGD HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEEEEECCCCCCCC VDGQGRRAFSNGLPGRGRATFSAEAIEAGEPGDGSVQARQFQQEVLVQGAPSPEGRTLKV CCCCCCHHHHCCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE TEPVAARVGGRSAQRLHAELEGPGGPTHLMALFVPRGEWVYRLVFTWPAAYPAYREVVDR CCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHH MVAEVRFDEPSVLREARARALLVPGAPGPLRALGGVLRRLGLPKEAVAPLSESVRLAPAH HHHHHCCCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCHHHHHCHHHCCEECHHH VETRVELARAFLEASRVEEGCHAAAEARVYGPWDTGALEAGVRCELSRGNVERALERLVE HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHH ARRVDPQDARLRAAELALRTVLEAAPHR HHCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLGGAPWLTLILATVLVGIHGAARAAGPVGLDTLLRWGAKAGPLVVDAGQVWRLVTAHF CCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHCCCCCCCEEEECHHHHHHHHHHH LHRDFPHLALNVLVLLAAGSGLERLCRRRDYAALLVAAGLATMAGSLGSSGGVSVGASGL HHCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH VYACVGALLVLGRRHRAKLPARWMSSEAAVPTVLVFLWMGWTSVGVDNAGHLGGLLAGLL HHHHHHHHHHHCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH AGVFLEPRWHPDTGWLRPVGMVVAAVVVTGGVVAERSVWRMERDDGFGLSVALPRDWRGD HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHEECCCCCEEEEECCCCCCCC VDGQGRRAFSNGLPGRGRATFSAEAIEAGEPGDGSVQARQFQQEVLVQGAPSPEGRTLKV CCCCCCHHHHCCCCCCCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE TEPVAARVGGRSAQRLHAELEGPGGPTHLMALFVPRGEWVYRLVFTWPAAYPAYREVVDR CCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHH MVAEVRFDEPSVLREARARALLVPGAPGPLRALGGVLRRLGLPKEAVAPLSESVRLAPAH HHHHHCCCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCCCHHHHHCHHHCCEECHHH VETRVELARAFLEASRVEEGCHAAAEARVYGPWDTGALEAGVRCELSRGNVERALERLVE HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHH ARRVDPQDARLRAAELALRTVLEAAPHR HHCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]