| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is sugE [H]
Identifier: 108763774
GI number: 108763774
Start: 4374503
End: 4374823
Strand: Direct
Name: sugE [H]
Synonym: MXAN_3665
Alternate gene names: 108763774
Gene position: 4374503-4374823 (Clockwise)
Preceding gene: 108758084
Following gene: 108761317
Centisome position: 47.86
GC content: 64.49
Gene sequence:
>321_bases ATGTCCTGGATTCTACTCGTCATCGCGGGGTTGCTCGAGGTCGGTTGGGCCATCGGTCTCAAGTACACCGAGGGCTTCAC CCGGCTGGTACCAAGCGTCCTCACGGGCGGCGCCATCGTCGCCAGCATGGTGCTTCTGGGGATCGCCACGAAGAACCTGC CCATTGGCACGGCCTATGGTGTTTGGGTCGGCATTGGCGCCGTGGGCGCGGCCATCATGGGCATCGTGCTCTTCAATGAG CCGGCCACGCCCGCGCGCGTGTTCTTCCTGGTGCTGCTCCTCACCTCCATCGTGGGCTTGAAGGTCACCAGCGGCCGGTA G
Upstream 100 bases:
>100_bases GAGGGGGGCGCCAGCGGCCTCATCGTGAGGGTGTCTGGCCCGGACGAGGCGCGCCGTACCCGGTCAGGACAAGACGACGC GACAACGGGAGTCGTACGTC
Downstream 100 bases:
>100_bases GTGGCCCTTCGGTGCTGATTTCCCAGGCGCTGCCTTGTAGGCAGCGCTACACGTGGGAGTCATGCGCGATGCGTTCCTGG GTGGAGGTCGTCCGAAGCGG
Product: SMR family multidrug efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSWILLVIAGLLEVGWAIGLKYTEGFTRLVPSVLTGGAIVASMVLLGIATKNLPIGTAYGVWVGIGAVGAAIMGIVLFNE PATPARVFFLVLLLTSIVGLKVTSGR
Sequences:
>Translated_106_residues MSWILLVIAGLLEVGWAIGLKYTEGFTRLVPSVLTGGAIVASMVLLGIATKNLPIGTAYGVWVGIGAVGAAIMGIVLFNE PATPARVFFLVLLLTSIVGLKVTSGR >Mature_105_residues SWILLVIAGLLEVGWAIGLKYTEGFTRLVPSVLTGGAIVASMVLLGIATKNLPIGTAYGVWVGIGAVGAAIMGIVLFNEP ATPARVFFLVLLLTSIVGLKVTSGR
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=104, Percent_Identity=63.4615384615385, Blast_Score=125, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 10954; Mature: 10823
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWILLVIAGLLEVGWAIGLKYTEGFTRLVPSVLTGGAIVASMVLLGIATKNLPIGTAYG CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHH VWVGIGAVGAAIMGIVLFNEPATPARVFFLVLLLTSIVGLKVTSGR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SWILLVIAGLLEVGWAIGLKYTEGFTRLVPSVLTGGAIVASMVLLGIATKNLPIGTAYG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHH VWVGIGAVGAAIMGIVLFNEPATPARVFFLVLLLTSIVGLKVTSGR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]