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The map label for this gene is yjfR [C]

Identifier: 108761317

GI number: 108761317

Start: 4374954

End: 4376084

Strand: Direct

Name: yjfR [C]

Synonym: MXAN_3666

Alternate gene names: 108761317

Gene position: 4374954-4376084 (Clockwise)

Preceding gene: 108763774

Following gene: 108762357

Centisome position: 47.87

GC content: 71.0

Gene sequence:

>1131_bases
ATGGGGCTGGGCGCGGGCGTGGGTGCCCTCCTCACGTGGACGACGACGGACGGCCTCCAGTCTTTCGGGGCGCGGGCAGA
TGGGGCGCGCCTGGAGCGGATGAAGGCATCGTCGCGCTACCAGGCCGGCATCTTCATCAACACCGCCGGTGCCAGGCTGC
CGCAGAATGGGCCGGACTGGGGCACGTTGAAGGAGATGCTCTTCGGCACCCAGCAGCGTACGCCGCCGTCCGCGCTGCCC
ATGGAACGGGACGTGGCCGCGGCGCTGGCGAAGCCGCCGGAGAGCGGCCTGCGCGTGACGTGGCTGGGCCACTCCTCGCT
GCTGGTGGAGATTGACGGCTTCCGCATTCTCACAGACCCCATCTGGGGCGAGCGCGCGTCGCCGTCCACCATTGCTGGGC
CCAAGCGGTTCCATCCGCCTCCGCTTCCGCTGGAGGCGCTGCCGGACGTGGACGCGGTGCTGCTGTCGCATGACCACTAC
GACCACCTGGACATGCCCACCATTCGGGCGCTGGTGCCGCGTCAGGTGACGTTCTACGCGCCGCTGGGCGTGGGAGCGCA
CCTGGAGAAGTGGGGCGTTCCGGCGGAGCGCGTGGTGGAGCTGGACTGGTGGCAGGAGGTGTCACTGGGGGAGGGGGAGG
GCCGCCTGCGCATGGTGGCCACGCCCGCGCAGCACTTCTCCGGCCGGGGCCTGACGGACCGCAACAGCACGTCCTGGACG
TCGTGGACGCTGCTGGGCTCGCAGCATCGGGTCTTCTTCAGCGGGGACACGGGGCTGACGGAGGAGTTCGCGGAGGTAGG
GCGCCGCTTCGGTCCGTTCGACGTCACCATGTTCGAGGTGGGCGCCTTCCATCCATCTTGGGGAAGCATCCACCTGGGGC
CGCAGCAGGCGCTGAAGGCGCATGAGATGGTGCGGGGGCGCACCTTGCTGCCCATCCACTGGGGGACGTTCAGCCTGGCG
CTGCACGCCTGGGATGCGCCCGCGAACGAGCTGGCGGCCGGGGCGCGCGAGCGGGGCGTGAGTCTGCTCACGCCCGTCTT
GGGCCGCCCCGTGGAACCGACGCGGGAGCGCGCGGACACGGCGTGGTGGAGCACGGTGCAGGCCGCTGCTGTCGTTGGCG
ACGCGCCTTGA

Upstream 100 bases:

>100_bases
TGCCTTGTAGGCAGCGCTACACGTGGGAGTCATGCGCGATGCGTTCCTGGGTGGAGGTCGTCCGAAGCGGCGGGGCCTGT
GGCGGTATGCCCTGGGCGTG

Downstream 100 bases:

>100_bases
TGTATCGCCGAGGCCCCGACGTCACCCGGAGTCAGTCGGTACCCTGACAATCACGTCCTGAACAATCGGTGGCCGCGTAT
GACTGCTTTGTCGTGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MGLGAGVGALLTWTTTDGLQSFGARADGARLERMKASSRYQAGIFINTAGARLPQNGPDWGTLKEMLFGTQQRTPPSALP
MERDVAAALAKPPESGLRVTWLGHSSLLVEIDGFRILTDPIWGERASPSTIAGPKRFHPPPLPLEALPDVDAVLLSHDHY
DHLDMPTIRALVPRQVTFYAPLGVGAHLEKWGVPAERVVELDWWQEVSLGEGEGRLRMVATPAQHFSGRGLTDRNSTSWT
SWTLLGSQHRVFFSGDTGLTEEFAEVGRRFGPFDVTMFEVGAFHPSWGSIHLGPQQALKAHEMVRGRTLLPIHWGTFSLA
LHAWDAPANELAAGARERGVSLLTPVLGRPVEPTRERADTAWWSTVQAAAVVGDAP

Sequences:

>Translated_376_residues
MGLGAGVGALLTWTTTDGLQSFGARADGARLERMKASSRYQAGIFINTAGARLPQNGPDWGTLKEMLFGTQQRTPPSALP
MERDVAAALAKPPESGLRVTWLGHSSLLVEIDGFRILTDPIWGERASPSTIAGPKRFHPPPLPLEALPDVDAVLLSHDHY
DHLDMPTIRALVPRQVTFYAPLGVGAHLEKWGVPAERVVELDWWQEVSLGEGEGRLRMVATPAQHFSGRGLTDRNSTSWT
SWTLLGSQHRVFFSGDTGLTEEFAEVGRRFGPFDVTMFEVGAFHPSWGSIHLGPQQALKAHEMVRGRTLLPIHWGTFSLA
LHAWDAPANELAAGARERGVSLLTPVLGRPVEPTRERADTAWWSTVQAAAVVGDAP
>Mature_375_residues
GLGAGVGALLTWTTTDGLQSFGARADGARLERMKASSRYQAGIFINTAGARLPQNGPDWGTLKEMLFGTQQRTPPSALPM
ERDVAAALAKPPESGLRVTWLGHSSLLVEIDGFRILTDPIWGERASPSTIAGPKRFHPPPLPLEALPDVDAVLLSHDHYD
HLDMPTIRALVPRQVTFYAPLGVGAHLEKWGVPAERVVELDWWQEVSLGEGEGRLRMVATPAQHFSGRGLTDRNSTSWTS
WTLLGSQHRVFFSGDTGLTEEFAEVGRRFGPFDVTMFEVGAFHPSWGSIHLGPQQALKAHEMVRGRTLLPIHWGTFSLAL
HAWDAPANELAAGARERGVSLLTPVLGRPVEPTRERADTAWWSTVQAAAVVGDAP

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=253, Percent_Identity=43.4782608695652, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI170932481, Length=253, Percent_Identity=43.4782608695652, Blast_Score=222, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI17543102, Length=270, Percent_Identity=37.7777777777778, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI25148824, Length=270, Percent_Identity=37.7777777777778, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17543100, Length=270, Percent_Identity=37.7777777777778, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17543104, Length=258, Percent_Identity=37.984496124031, Blast_Score=206, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6325154, Length=289, Percent_Identity=30.7958477508651, Blast_Score=135, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40941; Mature: 40810

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLGAGVGALLTWTTTDGLQSFGARADGARLERMKASSRYQAGIFINTAGARLPQNGPDW
CCCCCCCCEEEEEEECHHHHHHCCCCCCHHHHHHHHCCCEECEEEEECCCCCCCCCCCCH
GTLKEMLFGTQQRTPPSALPMERDVAAALAKPPESGLRVTWLGHSSLLVEIDGFRILTDP
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCEEEEECC
IWGERASPSTIAGPKRFHPPPLPLEALPDVDAVLLSHDHYDHLDMPTIRALVPRQVTFYA
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCHHHHHCCCCEEEEE
PLGVGAHLEKWGVPAERVVELDWWQEVSLGEGEGRLRMVATPAQHFSGRGLTDRNSTSWT
CCCCCCHHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCCCCE
SWTLLGSQHRVFFSGDTGLTEEFAEVGRRFGPFDVTMFEVGAFHPSWGSIHLGPQQALKA
EEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECHHHHHHH
HEMVRGRTLLPIHWGTFSLALHAWDAPANELAAGARERGVSLLTPVLGRPVEPTRERADT
HHHHCCCEEEEEECCCEEEEEEECCCCHHHHHCCHHHCCHHHHHHHHCCCCCHHHHHHHH
AWWSTVQAAAVVGDAP
HHHHHHHHHHEECCCC
>Mature Secondary Structure 
GLGAGVGALLTWTTTDGLQSFGARADGARLERMKASSRYQAGIFINTAGARLPQNGPDW
CCCCCCCEEEEEEECHHHHHHCCCCCCHHHHHHHHCCCEECEEEEECCCCCCCCCCCCH
GTLKEMLFGTQQRTPPSALPMERDVAAALAKPPESGLRVTWLGHSSLLVEIDGFRILTDP
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCEEEEECC
IWGERASPSTIAGPKRFHPPPLPLEALPDVDAVLLSHDHYDHLDMPTIRALVPRQVTFYA
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCHHHHHCCCCEEEEE
PLGVGAHLEKWGVPAERVVELDWWQEVSLGEGEGRLRMVATPAQHFSGRGLTDRNSTSWT
CCCCCCHHHHHCCCHHHEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCCCCCE
SWTLLGSQHRVFFSGDTGLTEEFAEVGRRFGPFDVTMFEVGAFHPSWGSIHLGPQQALKA
EEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECHHHHHHH
HEMVRGRTLLPIHWGTFSLALHAWDAPANELAAGARERGVSLLTPVLGRPVEPTRERADT
HHHHCCCEEEEEECCCEEEEEEECCCCHHHHHCCHHHCCHHHHHHHHCCCCCHHHHHHHH
AWWSTVQAAAVVGDAP
HHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]