| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is plsC [H]
Identifier: 108763614
GI number: 108763614
Start: 6929829
End: 6930566
Strand: Reverse
Name: plsC [H]
Synonym: MXAN_5578
Alternate gene names: 108763614
Gene position: 6930566-6929829 (Counterclockwise)
Preceding gene: 108758409
Following gene: 108759794
Centisome position: 75.83
GC content: 70.33
Gene sequence:
>738_bases TTGATTCGCAAGCTCCTGCAGACGGCCTTTGCTGGAACGGCGGCGGTGGGCATCACCGGTGTGCTGTCTCCCGTGGTGTC GGCGCTGTCGCTGCGCGACGCCAAGGACGCGGACGGCGTGCTGGTGCTGTGGGCGCGCTCGCTGCTGGCGTCCGCGGGGG TGCGGCACGAGGCGGTGGGCGTCGAGAACGTCCCCACCGACACCCACGTCGTCTTCGTGAGCAACCACCAGTCGCACTAC GACGCGCTGGTGAACTTCGCCCACATCCGCAAGCACACGCGTTACGTGGCGAAGGCGGAGCTGTTCCGCATCCCCGTCTT CGGGCCCGCGCTCCGGCGCGCGGGCAACATCCCAGTGGAGCGCACCGGGGGGGCGGGAGACAGGGCCCGCCTGTCGGAAG CCGTCACGGCGCTGCGGGAACGGGTGAGCGTGCTCTTCTTCGCGGAAGGCACGCGCAGCACGGATGGGCGGCTGCGGCCG TTCAAGAAGGGAGCCGCGACGCTGGCCATCCAGGCGGGCGTTCCGGTGGTGCCCCTGGCCGTGTCAGGGACGCGCCTCAT TCTTCCCAAGGGGGGTCGGGCCGTGCGGTGGGGACAGCGCGTGGCGCTGGTGGTGGGAAAGCCCATCCCCACCCAGGGAC TGACGATGCAGGACCGCGACGCGCTCACGCGCCAGTTGGAAGACGCGGTCGCAGAACTCTATGCCGAGGCCTGCAAGCGC TCGGGAGACACGCCATGA
Upstream 100 bases:
>100_bases CCTCGGCGGGCATCGCCGTCGGGCTCGATAGAATCCTGATGCTGCTGCTCGGGGTCCAGCGCATCTCGGACGTGCTCCTT TTCCCCGCCCACGAGTTCGT
Downstream 100 bases:
>100_bases AGAAGCCAATCCAGACCACATCCCAGGCGCACCCGTGGCACGGAATCACCCCGGGCGAGGACGCCCCCGAAATCGTCACC GCGTACATCGAAATCGTCCC
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase family protein
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIRKLLQTAFAGTAAVGITGVLSPVVSALSLRDAKDADGVLVLWARSLLASAGVRHEAVGVENVPTDTHVVFVSNHQSHY DALVNFAHIRKHTRYVAKAELFRIPVFGPALRRAGNIPVERTGGAGDRARLSEAVTALRERVSVLFFAEGTRSTDGRLRP FKKGAATLAIQAGVPVVPLAVSGTRLILPKGGRAVRWGQRVALVVGKPIPTQGLTMQDRDALTRQLEDAVAELYAEACKR SGDTP
Sequences:
>Translated_245_residues MIRKLLQTAFAGTAAVGITGVLSPVVSALSLRDAKDADGVLVLWARSLLASAGVRHEAVGVENVPTDTHVVFVSNHQSHY DALVNFAHIRKHTRYVAKAELFRIPVFGPALRRAGNIPVERTGGAGDRARLSEAVTALRERVSVLFFAEGTRSTDGRLRP FKKGAATLAIQAGVPVVPLAVSGTRLILPKGGRAVRWGQRVALVVGKPIPTQGLTMQDRDALTRQLEDAVAELYAEACKR SGDTP >Mature_245_residues MIRKLLQTAFAGTAAVGITGVLSPVVSALSLRDAKDADGVLVLWARSLLASAGVRHEAVGVENVPTDTHVVFVSNHQSHY DALVNFAHIRKHTRYVAKAELFRIPVFGPALRRAGNIPVERTGGAGDRARLSEAVTALRERVSVLFFAEGTRSTDGRLRP FKKGAATLAIQAGVPVVPLAVSGTRLILPKGGRAVRWGQRVALVVGKPIPTQGLTMQDRDALTRQLEDAVAELYAEACKR SGDTP
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=185, Percent_Identity=35.6756756756757, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI15100175, Length=185, Percent_Identity=35.6756756756757, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI6041665, Length=187, Percent_Identity=32.0855614973262, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI1789395, Length=125, Percent_Identity=36, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17564032, Length=211, Percent_Identity=28.436018957346, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320151, Length=188, Percent_Identity=29.2553191489362, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641614, Length=204, Percent_Identity=32.843137254902, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24641612, Length=204, Percent_Identity=32.843137254902, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI281364648, Length=155, Percent_Identity=32.9032258064516, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24582856, Length=155, Percent_Identity=32.9032258064516, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24582854, Length=155, Percent_Identity=32.9032258064516, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 26168; Mature: 26168
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKLLQTAFAGTAAVGITGVLSPVVSALSLRDAKDADGVLVLWARSLLASAGVRHEAVG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCHHCCC VENVPTDTHVVFVSNHQSHYDALVNFAHIRKHTRYVAKAELFRIPVFGPALRRAGNIPVE CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCCCC RTGGAGDRARLSEAVTALRERVSVLFFAEGTRSTDGRLRPFKKGAATLAIQAGVPVVPLA CCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE VSGTRLILPKGGRAVRWGQRVALVVGKPIPTQGLTMQDRDALTRQLEDAVAELYAEACKR ECCCEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SGDTP CCCCC >Mature Secondary Structure MIRKLLQTAFAGTAAVGITGVLSPVVSALSLRDAKDADGVLVLWARSLLASAGVRHEAVG CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCHHCCC VENVPTDTHVVFVSNHQSHYDALVNFAHIRKHTRYVAKAELFRIPVFGPALRRAGNIPVE CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHCCCCCCC RTGGAGDRARLSEAVTALRERVSVLFFAEGTRSTDGRLRPFKKGAATLAIQAGVPVVPLA CCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE VSGTRLILPKGGRAVRWGQRVALVVGKPIPTQGLTMQDRDALTRQLEDAVAELYAEACKR ECCCEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SGDTP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]