| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is epsE [H]
Identifier: 108763426
GI number: 108763426
Start: 1670981
End: 1672000
Strand: Reverse
Name: epsE [H]
Synonym: MXAN_1422
Alternate gene names: 108763426
Gene position: 1672000-1670981 (Counterclockwise)
Preceding gene: 108761038
Following gene: 108757978
Centisome position: 18.29
GC content: 71.08
Gene sequence:
>1020_bases ATGCCCGTTCCGGCTGTTAGTGTCCTCCTCCCCGCGCGAAACGCCGAAGCCACTGTGGCCCGCGCCGTCCGCAGCCTCTT GACGGGCACCGTCCGCGACCTCCGCGTGTTCGCGGTGGACGACGGCTCCACGGACGGTACGCGTGAAGTGCTGACCGACC TGGCGGCGAGCGACTCGCGAGTGGAAGTCCTTGACGGCCGGGGCCAAGGCCTGGTGGCGGCGCTGAACCTGGCGCTGCGT GAAGCCACCTCCCCCTACGTGGCCCGGATGGACGCGGATGACGAGGCCCTTCCCAAACGCCTGGAGGCAAGCCTCACCGC CCTGGAGGCGGAACCCGGGTTGGCCGGCGTGGGCACGGCCGTGGAGCTGTTCCGGGATGACAAACCCGTGAGCCCCTCGC TCCAGGCCTATGCCATGTGGCTCAGCGGGCTCACCTCCGCAGAGCGACTCGACCGGGAGCGCTTCATCGAAAGCCCCCTG TGCCACCCTTCCGTCTGCCTGCGCCGGGACGCCCTGGTGGCCGCGGGAGGCTGGCGGGACGGCGACTTCCCGGAGGACTA CGCGCTGTGGCTGGAGCTGCTGGACCGGGGCTTCGGGCTGCGCAACCTGCCCGAGGTATTGCTTCGCTGGCGCGACAGCG ACGGGCGGATGACGCGAACGGACCCGCGCTATGCCGTCAAGCGCTTCATGTGGACGAAGGCGCGCTACCTGACGCGAGGC CGTGGCCCCCTGGCGGACGGGCGCCCCTGCACGGTGTGGGGCGCGGGCCCGAGCGGCAAGACGCTGACGTACTTCCTCCA CCAGGAAGGCGTCCGCGTGCGGCGCTACGTGGAGGTCCACCCTCGCAAGGTGGGCACGCGCATCCATGGCATCCCGGTCA TCTCTCCCCAGGAGCTCGGCGCCCCCGGGGATGGACACCTGTTGGTGTGCGTGGGCGTCCGCTGGGCCCGCGCGGAGATT CGCGAGGACCTCATCGGACGGGGCTGGGTGGAGGGTCGCGACTTCACCTGCGCGGCGTGA
Upstream 100 bases:
>100_bases CGGGCTGCAGCGCCGCCTGTCGGACCGCTGCGGGCTCCGGCGTGCCGGCGCTCTTGCCGTTTCTCACGCCACCCATGGGT GCAGCAGTCTACACACAACG
Downstream 100 bases:
>100_bases GGACTCACTCGGCGCCGCGAATGGCCCCCGAGGGCGCCGGCACGCCAGCGGCCAGGAAGAACCGCATCAGGTCCTCCGGC ACCGGCGCCTCGATGCGCAG
Product: group 2 family glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MPVPAVSVLLPARNAEATVARAVRSLLTGTVRDLRVFAVDDGSTDGTREVLTDLAASDSRVEVLDGRGQGLVAALNLALR EATSPYVARMDADDEALPKRLEASLTALEAEPGLAGVGTAVELFRDDKPVSPSLQAYAMWLSGLTSAERLDRERFIESPL CHPSVCLRRDALVAAGGWRDGDFPEDYALWLELLDRGFGLRNLPEVLLRWRDSDGRMTRTDPRYAVKRFMWTKARYLTRG RGPLADGRPCTVWGAGPSGKTLTYFLHQEGVRVRRYVEVHPRKVGTRIHGIPVISPQELGAPGDGHLLVCVGVRWARAEI REDLIGRGWVEGRDFTCAA
Sequences:
>Translated_339_residues MPVPAVSVLLPARNAEATVARAVRSLLTGTVRDLRVFAVDDGSTDGTREVLTDLAASDSRVEVLDGRGQGLVAALNLALR EATSPYVARMDADDEALPKRLEASLTALEAEPGLAGVGTAVELFRDDKPVSPSLQAYAMWLSGLTSAERLDRERFIESPL CHPSVCLRRDALVAAGGWRDGDFPEDYALWLELLDRGFGLRNLPEVLLRWRDSDGRMTRTDPRYAVKRFMWTKARYLTRG RGPLADGRPCTVWGAGPSGKTLTYFLHQEGVRVRRYVEVHPRKVGTRIHGIPVISPQELGAPGDGHLLVCVGVRWARAEI REDLIGRGWVEGRDFTCAA >Mature_338_residues PVPAVSVLLPARNAEATVARAVRSLLTGTVRDLRVFAVDDGSTDGTREVLTDLAASDSRVEVLDGRGQGLVAALNLALRE ATSPYVARMDADDEALPKRLEASLTALEAEPGLAGVGTAVELFRDDKPVSPSLQAYAMWLSGLTSAERLDRERFIESPLC HPSVCLRRDALVAAGGWRDGDFPEDYALWLELLDRGFGLRNLPEVLLRWRDSDGRMTRTDPRYAVKRFMWTKARYLTRGR GPLADGRPCTVWGAGPSGKTLTYFLHQEGVRVRRYVEVHPRKVGTRIHGIPVISPQELGAPGDGHLLVCVGVRWARAEIR EDLIGRGWVEGRDFTCAA
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 37249; Mature: 37118
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPAVSVLLPARNAEATVARAVRSLLTGTVRDLRVFAVDDGSTDGTREVLTDLAASDSR CCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCE VEVLDGRGQGLVAALNLALREATSPYVARMDADDEALPKRLEASLTALEAEPGLAGVGTA EEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEECCCCCCCHHHH VELFRDDKPVSPSLQAYAMWLSGLTSAERLDRERFIESPLCHPSVCLRRDALVAAGGWRD HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCC GDFPEDYALWLELLDRGFGLRNLPEVLLRWRDSDGRMTRTDPRYAVKRFMWTKARYLTRG CCCCHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCEECCCHHHHHHHHHHHHHHHHHCC RGPLADGRPCTVWGAGPSGKTLTYFLHQEGVRVRRYVEVHPRKVGTRIHGIPVISPQELG CCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEHEEECCHHHCCEECCCCCCCHHHCC APGDGHLLVCVGVRWARAEIREDLIGRGWVEGRDFTCAA CCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECC >Mature Secondary Structure PVPAVSVLLPARNAEATVARAVRSLLTGTVRDLRVFAVDDGSTDGTREVLTDLAASDSR CCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCE VEVLDGRGQGLVAALNLALREATSPYVARMDADDEALPKRLEASLTALEAEPGLAGVGTA EEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHEECCCCCCCHHHH VELFRDDKPVSPSLQAYAMWLSGLTSAERLDRERFIESPLCHPSVCLRRDALVAAGGWRD HHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEEECCCCC GDFPEDYALWLELLDRGFGLRNLPEVLLRWRDSDGRMTRTDPRYAVKRFMWTKARYLTRG CCCCHHHHHHHHHHHCCCCCCHHHHHHHEEECCCCCEECCCHHHHHHHHHHHHHHHHHCC RGPLADGRPCTVWGAGPSGKTLTYFLHQEGVRVRRYVEVHPRKVGTRIHGIPVISPQELG CCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEHEEECCHHHCCEECCCCCCCHHHCC APGDGHLLVCVGVRWARAEIREDLIGRGWVEGRDFTCAA CCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]