| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108757978
Identifier: 108757978
GI number: 108757978
Start: 1668350
End: 1669993
Strand: Reverse
Name: 108757978
Synonym: MXAN_1420
Alternate gene names: NA
Gene position: 1669993-1668350 (Counterclockwise)
Preceding gene: 108763426
Following gene: 108761361
Centisome position: 18.27
GC content: 71.35
Gene sequence:
>1644_bases ATGCGCCACGTGCTCCGGCACGCCGCCCCCCCTCCCTCTGTCCACCGCAGATGTCATGCGGCGGCACTCTACGCGCGCAT CGCCCTTCCGCGCCGCCCGCTTCCTGTTACCTTCCGCGCCCCCATGGACCGTCCCCTGCACTCCGTCCGTACGCGGCTGG ACGACTTCCTCGCCGAGCTCGCCACGCTGAACTACCGGCAAGGCGCCGGGCTCGCGCTGGATGTTTCCCCCAGCCAGCTC CACGCCGCCTTCCCCGAGCTGTCGTCTCCGGACACCTTCGCCGCCGCCAACGAGGCGCTCGCCAAGGCCCAATCGAAGAA CGAGCCCCTCACCGTCCGCCGCATCCGACTGGTGCGTGAGCTGGTGGCCTCGCACGTCGAGGACGCGCTCGCCGCCCGTC ACGTGGAGGCCATTGCCTCGCTGGAGGCCCAGGCCCGGCTGATGGTGGACGACCAGACCTACTCCTTCGGCGAGGCGCTG GGCCGCATTCCCCACGAGTCCGCCCGGGGCCGCCGCGCCCTGCTGGAGCGCGCCACCGGCGAGTTCCTCTGGCAGAACCG CACCCGTTACGGTGACCGGCGCGATGCGGCCCTGCACACCGCGGAGCAGTTGGGCGCGAAGAACTACCCCGCCCTGCGCC AGGACGTCACCGGCATCGACTTCGCCAAACTGGCCGAGTCCGCCGCGACGATGCTCGCGCGCACGGAGGACGCCTACCGC GACGTGCTCGCCTACGTCCTCAAGAAGGTGGACCCACTGCTGCGTCCACTGCCCGGCGGAGAGGCCCGCAGGCATGACCT GCAGGCCGCGCTTCAAGCACCGTGGATGGGCGGCCTCTTCCGGCGCGAGGACGCCTTCCCCGCCGTGGTGCGCTGGCTGG GCGAGTGGGGCCTGACGCCCAACGCCGGAGGCCGCATCCGCATCGACGACGAGGCCCGGCCTGGCAAGTCACCGCGCCCC TTCGTCGCCGTGGTGCGCGTGCCAGACGACATCCGCCTGGTGCTCCAGCCGCGAGGCGGCATCGACGGGCTGGCCAGCCT GCTACATGAGATGGGCCACGCGCAGCACCGCGCCCACGTCTCCGACACGCTGCCCATGGAGCTGCGCCGGCTGGGCGACG CGTCCGTGACGGAGGCCCACGCCGCCGTCTTCGAACGGCTGCTCCTGTCCCCCGAGTGGCTCAAGCGCTACCTGGGACTG CCCACCGTGGCCGCGCGGGACACGGTGCGACTGGCCGCCTTCCAGGCCCTTGCGCTGCTGCGGCGTCACGCGGCCAAGCT GACCTACGAGCTGTCCCTCACGCAGCGGGGCGCCTCCACGGAACGCGCGGACGAATACGCCGACGGGCAGCGCCATGCGC TCTTCGTCGAGCCACACCCTGGTTTCTTCCTCCACGACGTGGACCCGCAACTGTACGTGGCGCACTACCTGCGGTCCTGG GCCCTGGAGACCCAGCTCACCGCGCGCATCACGGAGCAGTTCAACGAGGACTATTGGAGGAACCCCGCGGCCGCCGCCTG GTTGAAGGGGCTGTACGCGCGTGGGGGCACTGACGATGCGGAAGGATTGGCCACGGAGACGTCAGGCACGCCGTTGGCGT TGCCCGAGGCCGGGGAGCGCCTCGTGGCCATCCTCAACCGGTAG
Upstream 100 bases:
>100_bases ACGGCCTTCCCCACCAACGCCCCTTCCACTCGGAACGTCCGGCGCTTCATGCCGCCACCTCGCCCACCGGGCGGACAGCC TCAGCGTACGAGCCCGCGCC
Downstream 100 bases:
>100_bases GGGACACCCGCAAGACGACTACTTCTTCTTGCGGAGCGCCCGGACAATCTTGTCCTTGGTGGGATTGGCGGCGGCATCCC GCGCGCGCGTGGCGGCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MRHVLRHAAPPPSVHRRCHAAALYARIALPRRPLPVTFRAPMDRPLHSVRTRLDDFLAELATLNYRQGAGLALDVSPSQL HAAFPELSSPDTFAAANEALAKAQSKNEPLTVRRIRLVRELVASHVEDALAARHVEAIASLEAQARLMVDDQTYSFGEAL GRIPHESARGRRALLERATGEFLWQNRTRYGDRRDAALHTAEQLGAKNYPALRQDVTGIDFAKLAESAATMLARTEDAYR DVLAYVLKKVDPLLRPLPGGEARRHDLQAALQAPWMGGLFRREDAFPAVVRWLGEWGLTPNAGGRIRIDDEARPGKSPRP FVAVVRVPDDIRLVLQPRGGIDGLASLLHEMGHAQHRAHVSDTLPMELRRLGDASVTEAHAAVFERLLLSPEWLKRYLGL PTVAARDTVRLAAFQALALLRRHAAKLTYELSLTQRGASTERADEYADGQRHALFVEPHPGFFLHDVDPQLYVAHYLRSW ALETQLTARITEQFNEDYWRNPAAAAWLKGLYARGGTDDAEGLATETSGTPLALPEAGERLVAILNR
Sequences:
>Translated_547_residues MRHVLRHAAPPPSVHRRCHAAALYARIALPRRPLPVTFRAPMDRPLHSVRTRLDDFLAELATLNYRQGAGLALDVSPSQL HAAFPELSSPDTFAAANEALAKAQSKNEPLTVRRIRLVRELVASHVEDALAARHVEAIASLEAQARLMVDDQTYSFGEAL GRIPHESARGRRALLERATGEFLWQNRTRYGDRRDAALHTAEQLGAKNYPALRQDVTGIDFAKLAESAATMLARTEDAYR DVLAYVLKKVDPLLRPLPGGEARRHDLQAALQAPWMGGLFRREDAFPAVVRWLGEWGLTPNAGGRIRIDDEARPGKSPRP FVAVVRVPDDIRLVLQPRGGIDGLASLLHEMGHAQHRAHVSDTLPMELRRLGDASVTEAHAAVFERLLLSPEWLKRYLGL PTVAARDTVRLAAFQALALLRRHAAKLTYELSLTQRGASTERADEYADGQRHALFVEPHPGFFLHDVDPQLYVAHYLRSW ALETQLTARITEQFNEDYWRNPAAAAWLKGLYARGGTDDAEGLATETSGTPLALPEAGERLVAILNR >Mature_547_residues MRHVLRHAAPPPSVHRRCHAAALYARIALPRRPLPVTFRAPMDRPLHSVRTRLDDFLAELATLNYRQGAGLALDVSPSQL HAAFPELSSPDTFAAANEALAKAQSKNEPLTVRRIRLVRELVASHVEDALAARHVEAIASLEAQARLMVDDQTYSFGEAL GRIPHESARGRRALLERATGEFLWQNRTRYGDRRDAALHTAEQLGAKNYPALRQDVTGIDFAKLAESAATMLARTEDAYR DVLAYVLKKVDPLLRPLPGGEARRHDLQAALQAPWMGGLFRREDAFPAVVRWLGEWGLTPNAGGRIRIDDEARPGKSPRP FVAVVRVPDDIRLVLQPRGGIDGLASLLHEMGHAQHRAHVSDTLPMELRRLGDASVTEAHAAVFERLLLSPEWLKRYLGL PTVAARDTVRLAAFQALALLRRHAAKLTYELSLTQRGASTERADEYADGQRHALFVEPHPGFFLHDVDPQLYVAHYLRSW ALETQLTARITEQFNEDYWRNPAAAAWLKGLYARGGTDDAEGLATETSGTPLALPEAGERLVAILNR
Specific function: Unknown
COG id: COG1164
COG function: function code E; Oligoendopeptidase F
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60757; Mature: 60757
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVLRHAAPPPSVHRRCHAAALYARIALPRRPLPVTFRAPMDRPLHSVRTRLDDFLAEL CCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH ATLNYRQGAGLALDVSPSQLHAAFPELSSPDTFAAANEALAKAQSKNEPLTVRRIRLVRE HHCCCCCCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LVASHVEDALAARHVEAIASLEAQARLMVDDQTYSFGEALGRIPHESARGRRALLERATG HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH EFLWQNRTRYGDRRDAALHTAEQLGAKNYPALRQDVTGIDFAKLAESAATMLARTEDAYR HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH DVLAYVLKKVDPLLRPLPGGEARRHDLQAALQAPWMGGLFRREDAFPAVVRWLGEWGLTP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCC NAGGRIRIDDEARPGKSPRPFVAVVRVPDDIRLVLQPRGGIDGLASLLHEMGHAQHRAHV CCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC SDTLPMELRRLGDASVTEAHAAVFERLLLSPEWLKRYLGLPTVAARDTVRLAAFQALALL CCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RRHAAKLTYELSLTQRGASTERADEYADGQRHALFVEPHPGFFLHDVDPQLYVAHYLRSW HHHHHHEEEEEEEHHCCCCHHHHHHHCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHH ALETQLTARITEQFNEDYWRNPAAAAWLKGLYARGGTDDAEGLATETSGTPLALPEAGER HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCCHH LVAILNR HHHHHCC >Mature Secondary Structure MRHVLRHAAPPPSVHRRCHAAALYARIALPRRPLPVTFRAPMDRPLHSVRTRLDDFLAEL CCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH ATLNYRQGAGLALDVSPSQLHAAFPELSSPDTFAAANEALAKAQSKNEPLTVRRIRLVRE HHCCCCCCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LVASHVEDALAARHVEAIASLEAQARLMVDDQTYSFGEALGRIPHESARGRRALLERATG HHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH EFLWQNRTRYGDRRDAALHTAEQLGAKNYPALRQDVTGIDFAKLAESAATMLARTEDAYR HHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH DVLAYVLKKVDPLLRPLPGGEARRHDLQAALQAPWMGGLFRREDAFPAVVRWLGEWGLTP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCC NAGGRIRIDDEARPGKSPRPFVAVVRVPDDIRLVLQPRGGIDGLASLLHEMGHAQHRAHV CCCCEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC SDTLPMELRRLGDASVTEAHAAVFERLLLSPEWLKRYLGLPTVAARDTVRLAAFQALALL CCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RRHAAKLTYELSLTQRGASTERADEYADGQRHALFVEPHPGFFLHDVDPQLYVAHYLRSW HHHHHHEEEEEEEHHCCCCHHHHHHHCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHH ALETQLTARITEQFNEDYWRNPAAAAWLKGLYARGGTDDAEGLATETSGTPLALPEAGER HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEECCCCCHH LVAILNR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA