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The map label for this gene is rutD [H]

Identifier: 108762079

GI number: 108762079

Start: 1614920

End: 1615723

Strand: Reverse

Name: rutD [H]

Synonym: MXAN_1375

Alternate gene names: 108762079

Gene position: 1615723-1614920 (Counterclockwise)

Preceding gene: 108763672

Following gene: 108759310

Centisome position: 17.68

GC content: 70.27

Gene sequence:

>804_bases
GTGATAGACGGAGGGGCCATGCCCATCGCCGAGCTGAATGGACAGGGAATCTACTTCGAGGACTCCGGTGGAAACGGCCG
GCCCATCATCCTGGGCCATGGCTTCCTCATGGACCACCGGATGTTCGACGCGCAGGTGGCGGCGCTCGCTCCCGAGTTCC
GCGTCATCCGCTGGGATGCCCGCGGCTTCGGGCAGACACGCTGGGACGGCAAGCCCTTCACGCCGTGGGACTCGGCCGCG
GACTGCGTGGCGCTGCTGGACCACCTGGGCATCGAGCGAGCCGTCGTGGGCGGCATGTCCCAGGGCGGATACAGCGCGCT
GCGCGTGGCGCTGAAGCACCCCGAGCGCGTCCGGGCGCTGGTGCTGCTGAGCACCCGGGGCACCAACGACGACGCACCCA
CCCGCGCCGCCTACCAGCAGTCCGCCGACATCTGGGAGACGCAGGGCCCCATCGACCCGCTGGTGCAGGGGCTGGCACAG
GCCATCATCGGGGACACGCGCTACTTCGACACCTGGCTGCCACGCTGGCGGCAAATCCCCGGCGGACACTTCGCCAACGC
CATCCGCTCGCTCATCGACCGGGACGACATCTCCGGACGGCTGACGGAGATTCGCTGCCCCGCCATCGTCTTCCACGGGC
TGGAGGACCACGGCATGCCCCCGGTCCACGGCGAGCACCTGCACCAGACGCTGCCCGGCAGCGTGCGCTTCGTCCCGGTT
CCCGGCGCCGCACACGCGGCGAACATGACGCACCCGGAAGCCGTCAATCCGGCGCTGCTGGAGTTCCTGCGCGCCCACGC
CTGA

Upstream 100 bases:

>100_bases
ATCGCGGGGTGCTTCCCCTGGCGCTGCGGCTGCTGGAGCGGCGGCGTGAAGTGGTGCTCCAGGCGGTGACGCGGGAGTAG
CGCGCGCGGCCTTCCCGGGG

Downstream 100 bases:

>100_bases
CACGCGAAAGCCGCGGACGCCTCCAAGCGCGCCCGCGGCTTCCTGTCCCCCGCTTCGCTGACGCTCAGTAGGCGATGTTG
TAGCGGGCGGCCTGCGCCTT

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MIDGGAMPIAELNGQGIYFEDSGGNGRPIILGHGFLMDHRMFDAQVAALAPEFRVIRWDARGFGQTRWDGKPFTPWDSAA
DCVALLDHLGIERAVVGGMSQGGYSALRVALKHPERVRALVLLSTRGTNDDAPTRAAYQQSADIWETQGPIDPLVQGLAQ
AIIGDTRYFDTWLPRWRQIPGGHFANAIRSLIDRDDISGRLTEIRCPAIVFHGLEDHGMPPVHGEHLHQTLPGSVRFVPV
PGAAHAANMTHPEAVNPALLEFLRAHA

Sequences:

>Translated_267_residues
MIDGGAMPIAELNGQGIYFEDSGGNGRPIILGHGFLMDHRMFDAQVAALAPEFRVIRWDARGFGQTRWDGKPFTPWDSAA
DCVALLDHLGIERAVVGGMSQGGYSALRVALKHPERVRALVLLSTRGTNDDAPTRAAYQQSADIWETQGPIDPLVQGLAQ
AIIGDTRYFDTWLPRWRQIPGGHFANAIRSLIDRDDISGRLTEIRCPAIVFHGLEDHGMPPVHGEHLHQTLPGSVRFVPV
PGAAHAANMTHPEAVNPALLEFLRAHA
>Mature_267_residues
MIDGGAMPIAELNGQGIYFEDSGGNGRPIILGHGFLMDHRMFDAQVAALAPEFRVIRWDARGFGQTRWDGKPFTPWDSAA
DCVALLDHLGIERAVVGGMSQGGYSALRVALKHPERVRALVLLSTRGTNDDAPTRAAYQQSADIWETQGPIDPLVQGLAQ
AIIGDTRYFDTWLPRWRQIPGGHFANAIRSLIDRDDISGRLTEIRCPAIVFHGLEDHGMPPVHGEHLHQTLPGSVRFVPV
PGAAHAANMTHPEAVNPALLEFLRAHA

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29164; Mature: 29164

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDGGAMPIAELNGQGIYFEDSGGNGRPIILGHGFLMDHRMFDAQVAALAPEFRVIRWDA
CCCCCCCCCEEECCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECC
RGFGQTRWDGKPFTPWDSAADCVALLDHLGIERAVVGGMSQGGYSALRVALKHPERVRAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHCHHHEEEE
VLLSTRGTNDDAPTRAAYQQSADIWETQGPIDPLVQGLAQAIIGDTRYFDTWLPRWRQIP
EEEECCCCCCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GGHFANAIRSLIDRDDISGRLTEIRCPAIVFHGLEDHGMPPVHGEHLHQTLPGSVRFVPV
CHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCHHCCCCCCCHHHHHHHCCCCEEEEEC
PGAAHAANMTHPEAVNPALLEFLRAHA
CCCHHHCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIDGGAMPIAELNGQGIYFEDSGGNGRPIILGHGFLMDHRMFDAQVAALAPEFRVIRWDA
CCCCCCCCCEEECCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECC
RGFGQTRWDGKPFTPWDSAADCVALLDHLGIERAVVGGMSQGGYSALRVALKHPERVRAL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHCHHHEEEE
VLLSTRGTNDDAPTRAAYQQSADIWETQGPIDPLVQGLAQAIIGDTRYFDTWLPRWRQIP
EEEECCCCCCCCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
GGHFANAIRSLIDRDDISGRLTEIRCPAIVFHGLEDHGMPPVHGEHLHQTLPGSVRFVPV
CHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCHHCCCCCCCHHHHHHHCCCCEEEEEC
PGAAHAANMTHPEAVNPALLEFLRAHA
CCCHHHCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA