| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761721
Identifier: 108761721
GI number: 108761721
Start: 4080996
End: 4081799
Strand: Direct
Name: 108761721
Synonym: MXAN_3500
Alternate gene names: NA
Gene position: 4080996-4081799 (Clockwise)
Preceding gene: 108756833
Following gene: 108760828
Centisome position: 44.65
GC content: 70.15
Gene sequence:
>804_bases TTGCCTCGGAGGGTGCAGCACATGGCGCAGCGCCTCGTGGGATGTCTGATCGCGGTCGTCACCGTCTTCGCGGCCGCTGG CTGCAAGGAGCGCTCGGACAAACCCGTCGCGGGGCTGCTCGCCGCCGGTGCGCCGGTGCTGCGCGCGGAAGGCAAGCAGT GGCGGCCCATCGCCGTCGGCTCGCAGTTGCTGGGGCATGACGAGCTGAAGGCCACCGGCCCCGCGGTGCTGGAGTTCTTC GGTGGTGGCCTGCGCTTCCTGGAGAAGGGCGACACGCTGGAGGTGGGCGAAGCGGACGAGGCGAAGCTCCATGGCGTCAA CCTGCCGTCCCGCCACATTGTCGAGGGCAAGCTCCAGGAGGCGCCGCGCCCGCTGCGCATCATCGCCGCGCGCTACACCC AGGTGCAGGTGACGCCCGCGAGTGCCCAGCAGGAAGACCCGTACAGCTCCAACGGCTACTTCGTCGCCTTCTTCACGCCC AACGGGCTGTCGCCCAACAAGACCTCTGACGAACCGTCGCGGGATGGCCCTCGCAAGCCGTTGCCGCCTCCGCCACACCG CCCCCGCGTGCCCCACATCCACGCAGGCAACCTGGGCGAGGGCGGTCTGGTGGCCACCGTGGAGGATGGCTTCATCGTGG CGGAGACGGACGACCTGGCCACCGCCGTGCTGCTGGAAGGGGGCGATGTGCCGCTGGGCCGCACGGTACGACTGATGGTG CCCGCCGGCACGGAGGTGGTCCTGCGCACGCAGCAGGGACGCAAGATTGAAGTCGAAGGGCCCGCGGACGTCCGGTTGCG GTGA
Upstream 100 bases:
>100_bases GAAGCTGGACGCGCCCGCGCGCGCCGTCACCCCCGGGCAGGCCGCGGTGGTCTACGATCAGGACCGCGTGCTCGGCGGCG GTTGGATTGTCTGACCCGCG
Downstream 100 bases:
>100_bases GGGGACGGGGAGGGTGGTTTGTCCTTTGGGGGCCCGCTTCGGTAGAGTCCTCGGTCGCCCAGCGGGAGGTGTGCATGACG CGCAGTGAGCTCATCGAGCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPRRVQHMAQRLVGCLIAVVTVFAAAGCKERSDKPVAGLLAAGAPVLRAEGKQWRPIAVGSQLLGHDELKATGPAVLEFF GGGLRFLEKGDTLEVGEADEAKLHGVNLPSRHIVEGKLQEAPRPLRIIAARYTQVQVTPASAQQEDPYSSNGYFVAFFTP NGLSPNKTSDEPSRDGPRKPLPPPPHRPRVPHIHAGNLGEGGLVATVEDGFIVAETDDLATAVLLEGGDVPLGRTVRLMV PAGTEVVLRTQQGRKIEVEGPADVRLR
Sequences:
>Translated_267_residues MPRRVQHMAQRLVGCLIAVVTVFAAAGCKERSDKPVAGLLAAGAPVLRAEGKQWRPIAVGSQLLGHDELKATGPAVLEFF GGGLRFLEKGDTLEVGEADEAKLHGVNLPSRHIVEGKLQEAPRPLRIIAARYTQVQVTPASAQQEDPYSSNGYFVAFFTP NGLSPNKTSDEPSRDGPRKPLPPPPHRPRVPHIHAGNLGEGGLVATVEDGFIVAETDDLATAVLLEGGDVPLGRTVRLMV PAGTEVVLRTQQGRKIEVEGPADVRLR >Mature_266_residues PRRVQHMAQRLVGCLIAVVTVFAAAGCKERSDKPVAGLLAAGAPVLRAEGKQWRPIAVGSQLLGHDELKATGPAVLEFFG GGLRFLEKGDTLEVGEADEAKLHGVNLPSRHIVEGKLQEAPRPLRIIAARYTQVQVTPASAQQEDPYSSNGYFVAFFTPN GLSPNKTSDEPSRDGPRKPLPPPPHRPRVPHIHAGNLGEGGLVATVEDGFIVAETDDLATAVLLEGGDVPLGRTVRLMVP AGTEVVLRTQQGRKIEVEGPADVRLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28518; Mature: 28387
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRVQHMAQRLVGCLIAVVTVFAAAGCKERSDKPVAGLLAAGAPVLRAEGKQWRPIAVG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCCEEECC SQLLGHDELKATGPAVLEFFGGGLRFLEKGDTLEVGEADEAKLHGVNLPSRHIVEGKLQE HHHHCCCHHHCCCHHHHHHHCCCEEEECCCCEEECCCCCCCEEECCCCCCCCEECCHHHH APRPLRIIAARYTQVQVTPASAQQEDPYSSNGYFVAFFTPNGLSPNKTSDEPSRDGPRKP CCCCEEEEEEECEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC LPPPPHRPRVPHIHAGNLGEGGLVATVEDGFIVAETDDLATAVLLEGGDVPLGRTVRLMV CCCCCCCCCCCEEECCCCCCCCEEEEEECCEEEEECCCCEEEEEEECCCCCCCCEEEEEE PAGTEVVLRTQQGRKIEVEGPADVRLR CCCCEEEEEECCCCEEEECCCCCCEEC >Mature Secondary Structure PRRVQHMAQRLVGCLIAVVTVFAAAGCKERSDKPVAGLLAAGAPVLRAEGKQWRPIAVG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEECCCCCCCEEECC SQLLGHDELKATGPAVLEFFGGGLRFLEKGDTLEVGEADEAKLHGVNLPSRHIVEGKLQE HHHHCCCHHHCCCHHHHHHHCCCEEEECCCCEEECCCCCCCEEECCCCCCCCEECCHHHH APRPLRIIAARYTQVQVTPASAQQEDPYSSNGYFVAFFTPNGLSPNKTSDEPSRDGPRKP CCCCEEEEEEECEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC LPPPPHRPRVPHIHAGNLGEGGLVATVEDGFIVAETDDLATAVLLEGGDVPLGRTVRLMV CCCCCCCCCCCEEECCCCCCCCEEEEEECCEEEEECCCCEEEEEEECCCCCCCCEEEEEE PAGTEVVLRTQQGRKIEVEGPADVRLR CCCCEEEEEECCCCEEEECCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA