| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108761536
Identifier: 108761536
GI number: 108761536
Start: 5695600
End: 5696817
Strand: Direct
Name: 108761536
Synonym: MXAN_4563
Alternate gene names: NA
Gene position: 5695600-5696817 (Clockwise)
Preceding gene: 108761122
Following gene: 108760073
Centisome position: 62.32
GC content: 71.02
Gene sequence:
>1218_bases ATGCCAATGTCATGGCCTGCTTGGAGCCCCGCGTCATTCACCCGGGTCCGCCGCGCCTCCCCCCTTCGCCGGGCGCGGTG CGGGTGCGCCCGTTACAGTCGGATGTCCATGCGGCCCCACTTCCACGTGGCCGGCTTTCCCGTCCGGCTCCATCCGCTCT TCTTCGTCGTCGCATTGATGACGGGCTGGACGCTCATCTCCGAGCCCGCGCGGCTCGCGTTGTGGGTGGGCATCGTCTTC GTGTCGGTGCTGCTCCATGAACTGGGGCATGCGCTGGCCTTCCGCCGCTACGGCTGTCCCGCTCGAATCGAGCTGCACGG AATGGGCGGCACCACCCAGACCCACGACGCCGCGCACCTCACTCACCAGCAGTCGGCCTTCGTGAGCTTCGCCGGGCCGG GCATCGGCTTCCTGGCGGGAGGGCTCATCTGGGGTCTGTCGCAGCTCGTTCCCCTGGGTGAGCCGGGCGGACTGGCGGAC CAGGGCGTGCGGCAGTTCCTGTGGGTCAACATCGGCTGGGGGCTCTTCAACCTGCTGCCCATGCAGCCGCTGGACGGTGG ACATCTGCTGGCGGACCTGGTGCGCGCCCGCAGCGGCTACCGCCACGAACGGGGGGTGCTCGGCGTGGGCATCGCCACGG CGGTGGTGGTGCTGGGGCTGGCCATCTGGTCGAAGCAGCTGTGGATGGGGATGCTGGCGATGGTGCTGGGGGTGATGAAC CTCGAGCAGCTCCGCCGCACGCCGAAGCGGCGCCCCGCCGAGCGGCGGTTCGCCCTCCCCCGCCTGGTCCGCAAGCCCGA GGCGGCACCGGCGGGCGCCATCTCCATCGAGCAGTTGATGGACGAGCTGCGCGGAACGCCCCGCCCCCCAGGCGCGGCCG ATGCAGATGATGACCTGGAGGGCCCTCATGATCCGGCCCTGGTGGGCGAGATGCTCCTGGACAACGGGCTGCCGGAGCTG GCCGTGGGCTCGCTCCAATCCGCCTTCACGCAGGCGCCCCTGGCGCGCACCGGCCATGCCCTGGTGCTGGCGCTGCTGCA CACCGGGCGGCTCCAGGAACTGGCCTCGCTGCTGGACAGCTCGCACGCCCGGCAGCTGTCCGAGGACACGCTGGCCCTCA TCTCCGAACACGCCGGGACGGCCAGTGAGGCCCCACTCACCGAGCGGATTACCGCGCTGCGGCACGGGCGGACTCCTGCC ACGGATGAGCCCCGCTGA
Upstream 100 bases:
>100_bases CGAGACTCTATCTCACTTCTCGTGCTTCGCGAGGCCCTGTCCCCACATCCACGCCGCGCCGGGGAAGACGCCACGGCCGG CATGTCACTGAAGCCATGTC
Downstream 100 bases:
>100_bases TTGCCGCGCCGCGCCAGAAGGTGCTCTCCGCCTGACGTCCGGCAGGCGGCCCATCAACTGCCTTGAGCGGGAGGCACGTA TCCGGGTTATAGGGGCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Site-2-type intermembrane protease [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MPMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALMTGWTLISEPARLALWVGIVF VSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHLTHQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLAD QGVRQFLWVNIGWGLFNLLPMQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLEGPHDPALVGEMLLDNGLPEL AVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDSSHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPA TDEPR
Sequences:
>Translated_405_residues MPMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALMTGWTLISEPARLALWVGIVF VSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHLTHQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLAD QGVRQFLWVNIGWGLFNLLPMQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLEGPHDPALVGEMLLDNGLPEL AVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDSSHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPA TDEPR >Mature_404_residues PMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALMTGWTLISEPARLALWVGIVFV SVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHLTHQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLADQ GVRQFLWVNIGWGLFNLLPMQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMNL EQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLEGPHDPALVGEMLLDNGLPELA VGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDSSHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPAT DEPR
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR008915 - InterPro: IPR016483 [H]
Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 43943; Mature: 43811
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALM CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH TGWTLISEPARLALWVGIVFVSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHL HCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH THQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLADQGVRQFLWVNIGWGLFNLLP HHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCC MQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN CCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLE HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GPHDPALVGEMLLDNGLPELAVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDS CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH SHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPATDEPR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALM CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH TGWTLISEPARLALWVGIVFVSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHL HCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH THQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLADQGVRQFLWVNIGWGLFNLLP HHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCC MQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN CCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLE HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GPHDPALVGEMLLDNGLPELAVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDS CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH SHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPATDEPR HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]