| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is menA [H]
Identifier: 108760974
GI number: 108760974
Start: 4111072
End: 4111995
Strand: Direct
Name: menA [H]
Synonym: MXAN_3530
Alternate gene names: 108760974
Gene position: 4111072-4111995 (Clockwise)
Preceding gene: 108760127
Following gene: 108761657
Centisome position: 44.98
GC content: 69.37
Gene sequence:
>924_bases GTGAGCACGTCGGTTCCGGCGCCGGGCCCGCTGTCGGTGAAGCCCCGTCCCGGGGTGAAGCACTGGGTGATGGCGGCGCG CCCCAAGACGCTGACGGCGGCGCTGGTGCCGGTGTTGGTGGGCACGGGGCTCGCGTTCGGCTCGGGCGTGGGGCGCCTGC TGCCCGCGTTGGCAGCGCTGCTGGGCGCGGTGCTCATCCAGATTGGCACCAACTTCATCAACGACTACTACGACTTCAAG AAGGGCGCCGACACGCACGAACGGCTGGGCCCTCAGCGCGTGACGCAGAGTGGCCTCATCGCGCCGGGCACTGTGCTGGC GGGCGCGGGCGTGTGCTTTGCGCTGGCCACGGCCGTGGGCATGTACCTGGTGGCGGTGGGCGGCTGGCCCATCATCGCCA TCGGCCTGACGTCGCTGCTGTGCGGCTACGCATACACGGGCGGCCCCTTTCCCCTGGGCTACAATGGCCTGGGAGACGTG TTCGTCTTCATCTTTTTCGGCTTGGTGGCGGTGACGGGGACCTACTACGTGCAGGCGGGGACGGTGGACCCCGCGGCGTG GTGGGCGGCGGTTCCCGTGGGCGCCAGCGGCACCATGCTCATCGTCGTCAACAACCTGCGCGACGTGACGACGGACGTGA AGGCTGGCAAGCGCACCCTGGCGGTCCGCTTCGGCACGGGCGTGGGGAAGGCGGAGTACCTCCTCCTCCTGGTGCTGTCG TACGCCACGCCCTTCGCGATGTACGCGCTGAAGCTGGCCAGCCCCTGGGTGTTCCTGTCCCTGCTGAGCCTGCCCCTGGC GGTTCCCCCGTTGCGGCAGGTGTTGAAGCAGGAGGGGGCCGCGCTGAATCCGGCGCTGGGGTCCACGGCCAGACTCCAGC TCGTGTTTGGAGTGCTGTTCGCGTTGGGCCTCTACCTGCGATGA
Upstream 100 bases:
>100_bases AAGCCTACGTCCGTGAAGTCCTCGGGTTCCTCCAGACTCCCTGGTACGAGGCCCCGCAGTTCGACAGCCCCATGCCCGTG CGCGAGGGAAGGGTGGCGTC
Downstream 100 bases:
>100_bases TGTGAGGCCATGCGGATTGCCCAGGTTTCGCTCATTCCCCTCCGGTTGGAGCTGCGCCAGCCCCTGAAGACGTCACAAGG GGGGCACGCGGTGCGAGAAG
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSTSVPAPGPLSVKPRPGVKHWVMAARPKTLTAALVPVLVGTGLAFGSGVGRLLPALAALLGAVLIQIGTNFINDYYDFK KGADTHERLGPQRVTQSGLIAPGTVLAGAGVCFALATAVGMYLVAVGGWPIIAIGLTSLLCGYAYTGGPFPLGYNGLGDV FVFIFFGLVAVTGTYYVQAGTVDPAAWWAAVPVGASGTMLIVVNNLRDVTTDVKAGKRTLAVRFGTGVGKAEYLLLLVLS YATPFAMYALKLASPWVFLSLLSLPLAVPPLRQVLKQEGAALNPALGSTARLQLVFGVLFALGLYLR
Sequences:
>Translated_307_residues MSTSVPAPGPLSVKPRPGVKHWVMAARPKTLTAALVPVLVGTGLAFGSGVGRLLPALAALLGAVLIQIGTNFINDYYDFK KGADTHERLGPQRVTQSGLIAPGTVLAGAGVCFALATAVGMYLVAVGGWPIIAIGLTSLLCGYAYTGGPFPLGYNGLGDV FVFIFFGLVAVTGTYYVQAGTVDPAAWWAAVPVGASGTMLIVVNNLRDVTTDVKAGKRTLAVRFGTGVGKAEYLLLLVLS YATPFAMYALKLASPWVFLSLLSLPLAVPPLRQVLKQEGAALNPALGSTARLQLVFGVLFALGLYLR >Mature_306_residues STSVPAPGPLSVKPRPGVKHWVMAARPKTLTAALVPVLVGTGLAFGSGVGRLLPALAALLGAVLIQIGTNFINDYYDFKK GADTHERLGPQRVTQSGLIAPGTVLAGAGVCFALATAVGMYLVAVGGWPIIAIGLTSLLCGYAYTGGPFPLGYNGLGDVF VFIFFGLVAVTGTYYVQAGTVDPAAWWAAVPVGASGTMLIVVNNLRDVTTDVKAGKRTLAVRFGTGVGKAEYLLLLVLSY ATPFAMYALKLASPWVFLSLLSLPLAVPPLRQVLKQEGAALNPALGSTARLQLVFGVLFALGLYLR
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=298, Percent_Identity=32.2147651006711, Blast_Score=96, Evalue=4e-20, Organism=Escherichia coli, GI1790365, Length=295, Percent_Identity=36.9491525423729, Blast_Score=159, Evalue=2e-40, Organism=Drosophila melanogaster, GI17737429, Length=293, Percent_Identity=30.3754266211604, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 31904; Mature: 31773
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSVPAPGPLSVKPRPGVKHWVMAARPKTLTAALVPVLVGTGLAFGSGVGRLLPALAAL CCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH LGAVLIQIGTNFINDYYDFKKGADTHERLGPQRVTQSGLIAPGTVLAGAGVCFALATAVG HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH MYLVAVGGWPIIAIGLTSLLCGYAYTGGPFPLGYNGLGDVFVFIFFGLVAVTGTYYVQAG HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEC TVDPAAWWAAVPVGASGTMLIVVNNLRDVTTDVKAGKRTLAVRFGTGVGKAEYLLLLVLS CCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHH YATPFAMYALKLASPWVFLSLLSLPLAVPPLRQVLKQEGAALNPALGSTARLQLVFGVLF HHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ALGLYLR HHHHHCC >Mature Secondary Structure STSVPAPGPLSVKPRPGVKHWVMAARPKTLTAALVPVLVGTGLAFGSGVGRLLPALAAL CCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHH LGAVLIQIGTNFINDYYDFKKGADTHERLGPQRVTQSGLIAPGTVLAGAGVCFALATAVG HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH MYLVAVGGWPIIAIGLTSLLCGYAYTGGPFPLGYNGLGDVFVFIFFGLVAVTGTYYVQAG HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEC TVDPAAWWAAVPVGASGTMLIVVNNLRDVTTDVKAGKRTLAVRFGTGVGKAEYLLLLVLS CCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHH YATPFAMYALKLASPWVFLSLLSLPLAVPPLRQVLKQEGAALNPALGSTARLQLVFGVLF HHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH ALGLYLR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9573170; 8346018; 9278503 [H]