| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is macB [H]
Identifier: 108760824
GI number: 108760824
Start: 4351116
End: 4353626
Strand: Direct
Name: macB [H]
Synonym: MXAN_3648
Alternate gene names: 108760824
Gene position: 4351116-4353626 (Clockwise)
Preceding gene: 108760070
Following gene: 108757931
Centisome position: 47.61
GC content: 70.45
Gene sequence:
>2511_bases TTGTCCGATGATGGGATTTCGCGTGCCACAGGCGAACGCGAATCACGTCCCGGCCGGGTGTACGAAGGGCCCTGTCAGGC GCGACGTTGGATGGCGTTGGAGTTGCAGTGGAGTCTGTCCTTCATGTCCCAGCTTCTTCAGGACGTTCGATTGTCCCTGC GTCGCATGCGGCGCGAGGCCACATTCACGCTGGTCATCATCACCACGCTTGCGCTGGCCATTGGCGCCACCACCGCCGTC TTCAGCGCGGTGTACCAGGTGTTACTGCGGCCGTTGCCGTACCGGGCGCCGGAGCAGTTGGTGTCGCTGTACCAGTCGAC GCCCCAGCGCGAGCGGCTGGGCGTGTCGCTGCAGTCACTCCAGGCCTGGCGCGAGCGTGCGTTTGCGCTCCAAGGACTGG AGGGGCTGTCGATCCGCGACATCACCTTGGCGGGTGACGGCGAGCTGGAGCGGGTGCGGGCGGGGCGGGCAACAGCGGGC TTGTTCTCGCTCCTGGGCGTGCGGCCCTTGCTCGGACAGGACTTCCGCGCGGACAGGGACGCCAATGGCCTGCTCCTGTC GCATGCGCTGTGGCAGCGGCGCTTCGGTGGCCGCCCGGACGTGGTGGGACAGACGTTGATGGTGGATGACCAGCTCCACA CGGTGGTGGGGGTATTGCCCGCGGGTTTCCGCTTCGCACCGGACGTGGAGGCGTGGAAGCCGTTGGTCCTGGGGACGGAT GAGTCGGCCGGAGGGGTGTGGCTGCGCGTGGTGGGGCGCCTGCGCGAAGGCGTGTCCGCGGAGCAGGCACGCACGGAGAT GACGGCCCTGGGCGCCGCGCTGGTGCGCGAGCCGGGCTTCACGGAGGAGCCTGCTGGGGTGCGGCTGGTGCCCTTGCACA CGCAGGTGGTGGAGGGCTCCCAGGCGCGGCTGTGGCTCCTGGCCGGCGTCGTGGCGTTGGTGCTGCTGGTGGCCTGCGCC AACGTGGCCAACCTGTTGCTGGCGCGGGCTTCCGCGCGGGAGCGCGAGGTGTCAGTGCGCGCCGCCCTGGGCGCGGGCCG AGGGCGGCTGGTGCGGCAGTTCCTGGTGGAGAGCGGGATGCTGGCGCTCGTGGGCGGCGCCGCCGGACTGGTCCTGGCGA TGTGGGGCATGGATCTGCTGCGCGCGCTCATGCCGCCTCAGTTCGTGGATGCCGAGGCTCTCCGCCTGCAGCCGCATGTC CTGGGCATCGCGCTGGTTCTCTCGGTGGTGACCAGCCTGCTCTTTGGCCTGGTCCCCGCGCTGCGGGTGTCGCGCGCGGA TGCGCGGGGCGCGCTGGGCGGGCTGCGAGGTGGCGCAGGGGCCACGCGGGGCGAAGGCGGGCGCGTGGTGCTGGTGGTCG CGCAGGTGGCCTTGGCACTGATTCCGCTGGTGGGCGCGGGCCTGATGCTGCGCACCGTCCATGCCTTGAGCGTGGTGCCG CTGGGCTTCAATCCCCAGGGCGTCACCGTGGTGGACCTCTCCCTGCCATCGGCGAAGTACCGGGACGAGACCGTCCAACG GGCCCTCTTCTCCAGCGTGTTGGAGCGGGTGCGCGCGCTTCCAGGCGTGACGTCCGCGGGCATGTCCAGCACGGTGCCCC TGTGGGGACGCAATGGTCTGGCGCCGGTGCTGCTGCCGGGCGAGGCGGCATCACAGGCGGACTCCCGGGAGTTGGTCCAC TTCCGCACCACCAGCGACGGCTACTTCAACACCCTGGGCATCCCGCTGAAGGAAGGGCGCACCATCGAAGCCTGGAATGG GCCGGGCACCGCGCCGGTGGTCGTGGTGAACGAGACGTTCGCCCGGCGCTACTTCCCCGGGCGGAGCGCGGTGGGACAGC GCGTGCAACTGGTGCTCGACGGTGAGGCCTTCCGCGAAATCGTGGGCGTGGTGGGGGATGTCCAGCACAACAGCCTGGAT GCGCCCCCGGTCAGCGAAGCCTTCGTCCCCATGGGACAGCTCTGGGGACTGCACATGCTGCTCACCGTGCGAGCCTCGCA GGACGCTGTTGCGCTTGTCCCGGTGCTGCGCGAGCAGCTTCGCGCCGTGGCCCCCGAGCTCCCGAGAGTCTCCGTGCGCT CTCTGGAATCGGTCGTGGACGCCAGCCTGGGCCACACGAAGGTGCTGGGTTCGCTGCTGGTGGCCCTGGCGGTGCTGGGG CTGGTGCTCGCGGGCGTGGGGCTCTACGGCGTGTTGTCCTATTCGGTCAGTCAGCGGACGCGCGAGCTGGGCATCCGCAT GGCATTGGGCGCGACCGGGCAATATCTGGTGTGGCGCGTGGTGGGGCAGGGGCTTCGGATGGCCGTGGCCGGCGTCCTCC TGGGGCTTGTCGGCGCCGCCGTGTTCGCGCGCAGCCTGTCCAGTGTCCTGTATGGCGTGAGCGCGTTCGACATCGTCACC TTCGCGGCCGTGCCCGTGCTGCTCGCCGCAGTGGCGTTGCTGGCCAGTTGGCTGCCCGCGCGCCGCGTCACCCGCGTGCC GCTGCACGAGGCGCTGCGCTCGGACGACTGA
Upstream 100 bases:
>100_bases GGTAACGCATATTGCAATGGCCGCGCGGTCGGGCTGTCACGCATCGGGTTCCACCGTGGCGCCACGCTTCTTTTGGCCGC GTTGGAAGCGGACCGGGCTC
Downstream 100 bases:
>100_bases GGAAGTCTCCGGGACGTTCGATGCACGCTATCGGCGATTCGCGAGCCGGCTTAGGACTGGGGACAACCTGGCTGGAGGTG CCGCGCGATGAGGAAGGTGA
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 836; Mature: 835
Protein sequence:
>836_residues MSDDGISRATGERESRPGRVYEGPCQARRWMALELQWSLSFMSQLLQDVRLSLRRMRREATFTLVIITTLALAIGATTAV FSAVYQVLLRPLPYRAPEQLVSLYQSTPQRERLGVSLQSLQAWRERAFALQGLEGLSIRDITLAGDGELERVRAGRATAG LFSLLGVRPLLGQDFRADRDANGLLLSHALWQRRFGGRPDVVGQTLMVDDQLHTVVGVLPAGFRFAPDVEAWKPLVLGTD ESAGGVWLRVVGRLREGVSAEQARTEMTALGAALVREPGFTEEPAGVRLVPLHTQVVEGSQARLWLLAGVVALVLLVACA NVANLLLARASAREREVSVRAALGAGRGRLVRQFLVESGMLALVGGAAGLVLAMWGMDLLRALMPPQFVDAEALRLQPHV LGIALVLSVVTSLLFGLVPALRVSRADARGALGGLRGGAGATRGEGGRVVLVVAQVALALIPLVGAGLMLRTVHALSVVP LGFNPQGVTVVDLSLPSAKYRDETVQRALFSSVLERVRALPGVTSAGMSSTVPLWGRNGLAPVLLPGEAASQADSRELVH FRTTSDGYFNTLGIPLKEGRTIEAWNGPGTAPVVVVNETFARRYFPGRSAVGQRVQLVLDGEAFREIVGVVGDVQHNSLD APPVSEAFVPMGQLWGLHMLLTVRASQDAVALVPVLREQLRAVAPELPRVSVRSLESVVDASLGHTKVLGSLLVALAVLG LVLAGVGLYGVLSYSVSQRTRELGIRMALGATGQYLVWRVVGQGLRMAVAGVLLGLVGAAVFARSLSSVLYGVSAFDIVT FAAVPVLLAAVALLASWLPARRVTRVPLHEALRSDD
Sequences:
>Translated_836_residues MSDDGISRATGERESRPGRVYEGPCQARRWMALELQWSLSFMSQLLQDVRLSLRRMRREATFTLVIITTLALAIGATTAV FSAVYQVLLRPLPYRAPEQLVSLYQSTPQRERLGVSLQSLQAWRERAFALQGLEGLSIRDITLAGDGELERVRAGRATAG LFSLLGVRPLLGQDFRADRDANGLLLSHALWQRRFGGRPDVVGQTLMVDDQLHTVVGVLPAGFRFAPDVEAWKPLVLGTD ESAGGVWLRVVGRLREGVSAEQARTEMTALGAALVREPGFTEEPAGVRLVPLHTQVVEGSQARLWLLAGVVALVLLVACA NVANLLLARASAREREVSVRAALGAGRGRLVRQFLVESGMLALVGGAAGLVLAMWGMDLLRALMPPQFVDAEALRLQPHV LGIALVLSVVTSLLFGLVPALRVSRADARGALGGLRGGAGATRGEGGRVVLVVAQVALALIPLVGAGLMLRTVHALSVVP LGFNPQGVTVVDLSLPSAKYRDETVQRALFSSVLERVRALPGVTSAGMSSTVPLWGRNGLAPVLLPGEAASQADSRELVH FRTTSDGYFNTLGIPLKEGRTIEAWNGPGTAPVVVVNETFARRYFPGRSAVGQRVQLVLDGEAFREIVGVVGDVQHNSLD APPVSEAFVPMGQLWGLHMLLTVRASQDAVALVPVLREQLRAVAPELPRVSVRSLESVVDASLGHTKVLGSLLVALAVLG LVLAGVGLYGVLSYSVSQRTRELGIRMALGATGQYLVWRVVGQGLRMAVAGVLLGLVGAAVFARSLSSVLYGVSAFDIVT FAAVPVLLAAVALLASWLPARRVTRVPLHEALRSDD >Mature_835_residues SDDGISRATGERESRPGRVYEGPCQARRWMALELQWSLSFMSQLLQDVRLSLRRMRREATFTLVIITTLALAIGATTAVF SAVYQVLLRPLPYRAPEQLVSLYQSTPQRERLGVSLQSLQAWRERAFALQGLEGLSIRDITLAGDGELERVRAGRATAGL FSLLGVRPLLGQDFRADRDANGLLLSHALWQRRFGGRPDVVGQTLMVDDQLHTVVGVLPAGFRFAPDVEAWKPLVLGTDE SAGGVWLRVVGRLREGVSAEQARTEMTALGAALVREPGFTEEPAGVRLVPLHTQVVEGSQARLWLLAGVVALVLLVACAN VANLLLARASAREREVSVRAALGAGRGRLVRQFLVESGMLALVGGAAGLVLAMWGMDLLRALMPPQFVDAEALRLQPHVL GIALVLSVVTSLLFGLVPALRVSRADARGALGGLRGGAGATRGEGGRVVLVVAQVALALIPLVGAGLMLRTVHALSVVPL GFNPQGVTVVDLSLPSAKYRDETVQRALFSSVLERVRALPGVTSAGMSSTVPLWGRNGLAPVLLPGEAASQADSRELVHF RTTSDGYFNTLGIPLKEGRTIEAWNGPGTAPVVVVNETFARRYFPGRSAVGQRVQLVLDGEAFREIVGVVGDVQHNSLDA PPVSEAFVPMGQLWGLHMLLTVRASQDAVALVPVLREQLRAVAPELPRVSVRSLESVVDASLGHTKVLGSLLVALAVLGL VLAGVGLYGVLSYSVSQRTRELGIRMALGATGQYLVWRVVGQGLRMAVAGVLLGLVGAAVFARSLSSVLYGVSAFDIVTF AAVPVLLAAVALLASWLPARRVTRVPLHEALRSDD
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=288, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 89138; Mature: 89007
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDGISRATGERESRPGRVYEGPCQARRWMALELQWSLSFMSQLLQDVRLSLRRMRREA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH TFTLVIITTLALAIGATTAVFSAVYQVLLRPLPYRAPEQLVSLYQSTPQRERLGVSLQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHCCCHHHH QAWRERAFALQGLEGLSIRDITLAGDGELERVRAGRATAGLFSLLGVRPLLGQDFRADRD HHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCC ANGLLLSHALWQRRFGGRPDVVGQTLMVDDQLHTVVGVLPAGFRFAPDVEAWKPLVLGTD CCCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHCCCEEEECC ESAGGVWLRVVGRLREGVSAEQARTEMTALGAALVREPGFTEEPAGVRLVPLHTQVVEGS CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCC QARLWLLAGVVALVLLVACANVANLLLARASAREREVSVRAALGAGRGRLVRQFLVESGM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC LALVGGAAGLVLAMWGMDLLRALMPPQFVDAEALRLQPHVLGIALVLSVVTSLLFGLVPA CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LRVSRADARGALGGLRGGAGATRGEGGRVVLVVAQVALALIPLVGAGLMLRTVHALSVVP HHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHEEE LGFNPQGVTVVDLSLPSAKYRDETVQRALFSSVLERVRALPGVTSAGMSSTVPLWGRNGL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC APVLLPGEAASQADSRELVHFRTTSDGYFNTLGIPLKEGRTIEAWNGPGTAPVVVVNETF CCEEECCCHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEEECCCCCCCCEEEECCHH ARRYFPGRSAVGQRVQLVLDGEAFREIVGVVGDVQHNSLDAPPVSEAFVPMGQLWGLHML HHHCCCCCHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHEEEE LTVRASQDAVALVPVLREQLRAVAPELPRVSVRSLESVVDASLGHTKVLGSLLVALAVLG EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LVLAGVGLYGVLSYSVSQRTRELGIRMALGATGQYLVWRVVGQGLRMAVAGVLLGLVGAA HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VFARSLSSVLYGVSAFDIVTFAAVPVLLAAVALLASWLPARRVTRVPLHEALRSDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHCCCC >Mature Secondary Structure SDDGISRATGERESRPGRVYEGPCQARRWMALELQWSLSFMSQLLQDVRLSLRRMRREA CCCCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH TFTLVIITTLALAIGATTAVFSAVYQVLLRPLPYRAPEQLVSLYQSTPQRERLGVSLQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHCCCHHHH QAWRERAFALQGLEGLSIRDITLAGDGELERVRAGRATAGLFSLLGVRPLLGQDFRADRD HHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCCC ANGLLLSHALWQRRFGGRPDVVGQTLMVDDQLHTVVGVLPAGFRFAPDVEAWKPLVLGTD CCCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCHHHCCCEEEECC ESAGGVWLRVVGRLREGVSAEQARTEMTALGAALVREPGFTEEPAGVRLVPLHTQVVEGS CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCC QARLWLLAGVVALVLLVACANVANLLLARASAREREVSVRAALGAGRGRLVRQFLVESGM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC LALVGGAAGLVLAMWGMDLLRALMPPQFVDAEALRLQPHVLGIALVLSVVTSLLFGLVPA CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LRVSRADARGALGGLRGGAGATRGEGGRVVLVVAQVALALIPLVGAGLMLRTVHALSVVP HHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHEEE LGFNPQGVTVVDLSLPSAKYRDETVQRALFSSVLERVRALPGVTSAGMSSTVPLWGRNGL CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC APVLLPGEAASQADSRELVHFRTTSDGYFNTLGIPLKEGRTIEAWNGPGTAPVVVVNETF CCEEECCCHHCCCCCCCEEEEEECCCCCEEECCCCCCCCCEEEECCCCCCCCEEEECCHH ARRYFPGRSAVGQRVQLVLDGEAFREIVGVVGDVQHNSLDAPPVSEAFVPMGQLWGLHML HHHCCCCCHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHEEEE LTVRASQDAVALVPVLREQLRAVAPELPRVSVRSLESVVDASLGHTKVLGSLLVALAVLG EEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LVLAGVGLYGVLSYSVSQRTRELGIRMALGATGQYLVWRVVGQGLRMAVAGVLLGLVGAA HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VFARSLSSVLYGVSAFDIVTFAAVPVLLAAVALLASWLPARRVTRVPLHEALRSDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA