Click here to switch to the map view.

The map label for this gene is viuB [H]

Identifier: 108760070

GI number: 108760070

Start: 4337073

End: 4337888

Strand: Direct

Name: viuB [H]

Synonym: MXAN_3639

Alternate gene names: 108760070

Gene position: 4337073-4337888 (Clockwise)

Preceding gene: 108764082

Following gene: 108760824

Centisome position: 47.45

GC content: 69.24

Gene sequence:

>816_bases
GTGACGACGACGACTGAGCGTGTCTATCGGCGGGGACCGTTCCCCGTGAAGTTCCGCCTCTTGGAGGTGAAGCGGGTGAC
GCGGGTGACGCCGCAGATGGTCCGCATCACCCTTGCGGGCGAGGACCTGGAGGGCTTCTACAGCCCCGGCGCGGACGACC
ACGTGAAGCTGCTGTTCCCGGAGGAGGGCAAGCGCATGCCTGTCATCCCCACGGTGACGCCCACGGGGTTGGTGCTGAAG
GAAGGCGAGCGCAAGCCGGACGCGCGTGACTACACGCCGCGCCGCTATGACGCCGCGGCAGGCGAGCTGGACATCGACTT
CGTGGTGCACGGCACGGGGCCCGCGACGACGTGGGCGAGCAAGGCGCAGGTGGGTGACCTGCTGGCCGTGGGTGGGCCGC
GCGGCTCCACGTTCGTGGCGCAGGATTTCAGTTGGTACCTGCTCGCGGGCGATCAGTCAGCGCTGCCGGCCATTGGCCGC
ATCCTGGAGGAGCTGCCGGAGGGGACGCGCGCCATCGTGTTCTGCGAAGTCCCGGACGCGTCCGAGGAGCAGCACTTCAC
CACCCGCGCCAACGCGACAGTGACGTGGCTGCACCGCAACGGCGTGGAGGCGGGGCACTCGGACGTGTTGCAGCAGGCCA
TCCGCGGGCTGGAGTTCCCCGCGGGGGACTACTTCGCCTGGGTGGCGGGTGAGGCGCACACCGTGCGCCCCATCAAGGAC
CACCTCATCAACGAGCGTGGCGCCAACAAGAGCTGGGTCCGGGTGACGGGCTATTGGAAGCGCGGCACCTCGGACCACCA
CGACGCGAAGGGCTAG

Upstream 100 bases:

>100_bases
TCGCTGAGCGGCGGCCACCGCGGGGCTCCTTCATTCGTTGCCCGCCTGGGGGGCTTCATGGTATCGAAAATGATATTCAA
TATCGATACCTGGAGCATTC

Downstream 100 bases:

>100_bases
GCCGCCGCCGGCTGCGCGAGGGAGCGGAGGACTTCGCCCGTCATCTCGATGGCGTAGTCAATCTGCTCCTCCGTGTGCGC
CGTGCTGAGGAAGGTGACGT

Product: iron-chelator utilization protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTTTTERVYRRGPFPVKFRLLEVKRVTRVTPQMVRITLAGEDLEGFYSPGADDHVKLLFPEEGKRMPVIPTVTPTGLVLK
EGERKPDARDYTPRRYDAAAGELDIDFVVHGTGPATTWASKAQVGDLLAVGGPRGSTFVAQDFSWYLLAGDQSALPAIGR
ILEELPEGTRAIVFCEVPDASEEQHFTTRANATVTWLHRNGVEAGHSDVLQQAIRGLEFPAGDYFAWVAGEAHTVRPIKD
HLINERGANKSWVRVTGYWKRGTSDHHDAKG

Sequences:

>Translated_271_residues
MTTTTERVYRRGPFPVKFRLLEVKRVTRVTPQMVRITLAGEDLEGFYSPGADDHVKLLFPEEGKRMPVIPTVTPTGLVLK
EGERKPDARDYTPRRYDAAAGELDIDFVVHGTGPATTWASKAQVGDLLAVGGPRGSTFVAQDFSWYLLAGDQSALPAIGR
ILEELPEGTRAIVFCEVPDASEEQHFTTRANATVTWLHRNGVEAGHSDVLQQAIRGLEFPAGDYFAWVAGEAHTVRPIKD
HLINERGANKSWVRVTGYWKRGTSDHHDAKG
>Mature_270_residues
TTTTERVYRRGPFPVKFRLLEVKRVTRVTPQMVRITLAGEDLEGFYSPGADDHVKLLFPEEGKRMPVIPTVTPTGLVLKE
GERKPDARDYTPRRYDAAAGELDIDFVVHGTGPATTWASKAQVGDLLAVGGPRGSTFVAQDFSWYLLAGDQSALPAIGRI
LEELPEGTRAIVFCEVPDASEEQHFTTRANATVTWLHRNGVEAGHSDVLQQAIRGLEFPAGDYFAWVAGEAHTVRPIKDH
LINERGANKSWVRVTGYWKRGTSDHHDAKG

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=260, Percent_Identity=36.9230769230769, Blast_Score=147, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 29989; Mature: 29858

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTERVYRRGPFPVKFRLLEVKRVTRVTPQMVRITLAGEDLEGFYSPGADDHVKLLFP
CCCCHHHHHHCCCCCEEEEEEEEHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEC
EEGKRMPVIPTVTPTGLVLKEGERKPDARDYTPRRYDAAAGELDIDFVVHGTGPATTWAS
CCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
KAQVGDLLAVGGPRGSTFVAQDFSWYLLAGDQSALPAIGRILEELPEGTRAIVFCEVPDA
HHCCCCEEEECCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCC
SEEQHFTTRANATVTWLHRNGVEAGHSDVLQQAIRGLEFPAGDYFAWVAGEAHTVRPIKD
CCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEECHHHH
HLINERGANKSWVRVTGYWKRGTSDHHDAKG
HHHCCCCCCCCEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TTTTERVYRRGPFPVKFRLLEVKRVTRVTPQMVRITLAGEDLEGFYSPGADDHVKLLFP
CCCHHHHHHCCCCCEEEEEEEEHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEC
EEGKRMPVIPTVTPTGLVLKEGERKPDARDYTPRRYDAAAGELDIDFVVHGTGPATTWAS
CCCCCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
KAQVGDLLAVGGPRGSTFVAQDFSWYLLAGDQSALPAIGRILEELPEGTRAIVFCEVPDA
HHCCCCEEEECCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCC
SEEQHFTTRANATVTWLHRNGVEAGHSDVLQQAIRGLEFPAGDYFAWVAGEAHTVRPIKD
CCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEECHHHH
HLINERGANKSWVRVTGYWKRGTSDHHDAKG
HHHCCCCCCCCEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]