| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760520
Identifier: 108760520
GI number: 108760520
Start: 4146419
End: 4147363
Strand: Direct
Name: 108760520
Synonym: MXAN_3563
Alternate gene names: NA
Gene position: 4146419-4147363 (Clockwise)
Preceding gene: 108762762
Following gene: 108759376
Centisome position: 45.37
GC content: 68.68
Gene sequence:
>945_bases ATGGACGCCGACATCACGCATGTCCTGCTGGTCGGAGGTACGGGGCGTTTTGGCGGCAGGTTGGCGTCGGCGCTGCTGGC GCGTCCCGGCATCCACTTGCATGTGTTGGTACGTCCGGGCACGCGCAGCGACGCGCTGGTGCGTCTGGCGGAGCATGGGG TGACGTTGGTGAGCGGGACGCTGGATGACATGCGCTCGCTCGATTCGGCCTTGGAGGGCGTGGATGCGGTGGTCTCCGCC GTGAGCGGACCACCCGAGGTGCAAGTGGCAGGGCAACTCCGGTTGCTGGACTCCGCGCGGCGGCATGGCGTCATCCGCTT CATCCCTTCGGACTACTCGCTGGACTACACCGACGCGGACGCGGGTGACGCCTTCATGGATGCGCACCGCCGTGTCGCGG ACGCCGTGGTGAAGAGCGGCGTGCCGCACTCCTTCGTCCTCTGCGGCGCGTTCATGGAGACGGCGCTGTCGCCGCAGGCG CAGGTGTTCGACTTTGAGCGCGGCGTTGTCTCGTACTGGGGCACGGGGGACGAGCCCTTCGACGTCACCGCGATGGCGGA TGCGGCGCGTTGGGTGGCGGAGGTGGTGGTGGATCCTCACGCCGCGGGCCGGCGGCTGGAGTTCGTGGGGGACGTGGCGA CGGTGAATGACGTGGCCGCCCTGTACGAAGCGCTGACCGGTCAGCGCCTGCGCCGCCTGTGCAGGGGGAGTGTGGAGGAC CTTCGCCGGCAGCTCGTGCGCGCACGGCCCGAAGGCGTGTCCGTTCAGGTGTCTTCAGCGGAGCTGAGTCTGCTCTCGCA GCTTGCGGGGAAGGGGAGACTGCGCGAACCGGCAAATGCCGAGTACCCGCGGCTCCGGCCCATGACGCTGCGCGACTTCC TTGAAGCACGGTGGATGGTGTCGACATCCGCGCGGGCGACGTTGCCACTCGCTTCACAGCCGTAG
Upstream 100 bases:
>100_bases GGTGAAGGCGTACCCGGCACCACGGTCCATCTTCCTCATAGGGGATTGCCCCCACCGGTGATGCGCGGCTCACGCCGCCG ACAACGACGAGGAGGAGTCC
Downstream 100 bases:
>100_bases CCCGCGAGCATCGCGGACACTCGGTGGAGTCAGCGCGTCTCGGTGGCGGTGCGCTGCGGGCTCGGGTCGCACGCCAGCAG GGCGCACTGCGTCGCGGGCG
Product: NAD-dependent epimerase/dehydratase family protein
Products: NA
Alternate protein names: Cytoplasmic Protein; NAD-Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MDADITHVLLVGGTGRFGGRLASALLARPGIHLHVLVRPGTRSDALVRLAEHGVTLVSGTLDDMRSLDSALEGVDAVVSA VSGPPEVQVAGQLRLLDSARRHGVIRFIPSDYSLDYTDADAGDAFMDAHRRVADAVVKSGVPHSFVLCGAFMETALSPQA QVFDFERGVVSYWGTGDEPFDVTAMADAARWVAEVVVDPHAAGRRLEFVGDVATVNDVAALYEALTGQRLRRLCRGSVED LRRQLVRARPEGVSVQVSSAELSLLSQLAGKGRLREPANAEYPRLRPMTLRDFLEARWMVSTSARATLPLASQP
Sequences:
>Translated_314_residues MDADITHVLLVGGTGRFGGRLASALLARPGIHLHVLVRPGTRSDALVRLAEHGVTLVSGTLDDMRSLDSALEGVDAVVSA VSGPPEVQVAGQLRLLDSARRHGVIRFIPSDYSLDYTDADAGDAFMDAHRRVADAVVKSGVPHSFVLCGAFMETALSPQA QVFDFERGVVSYWGTGDEPFDVTAMADAARWVAEVVVDPHAAGRRLEFVGDVATVNDVAALYEALTGQRLRRLCRGSVED LRRQLVRARPEGVSVQVSSAELSLLSQLAGKGRLREPANAEYPRLRPMTLRDFLEARWMVSTSARATLPLASQP >Mature_314_residues MDADITHVLLVGGTGRFGGRLASALLARPGIHLHVLVRPGTRSDALVRLAEHGVTLVSGTLDDMRSLDSALEGVDAVVSA VSGPPEVQVAGQLRLLDSARRHGVIRFIPSDYSLDYTDADAGDAFMDAHRRVADAVVKSGVPHSFVLCGAFMETALSPQA QVFDFERGVVSYWGTGDEPFDVTAMADAARWVAEVVVDPHAAGRRLEFVGDVATVNDVAALYEALTGQRLRRLCRGSVED LRRQLVRARPEGVSVQVSSAELSLLSQLAGKGRLREPANAEYPRLRPMTLRDFLEARWMVSTSARATLPLASQP
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33817; Mature: 33817
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDADITHVLLVGGTGRFGGRLASALLARPGIHLHVLVRPGTRSDALVRLAEHGVTLVSGT CCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECC LDDMRSLDSALEGVDAVVSAVSGPPEVQVAGQLRLLDSARRHGVIRFIPSDYSLDYTDAD HHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCEEEECCCCCCCCCCCCC AGDAFMDAHRRVADAVVKSGVPHSFVLCGAFMETALSPQAQVFDFERGVVSYWGTGDEPF CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHEECCCCCEEECCCCCCCE DVTAMADAARWVAEVVVDPHAAGRRLEFVGDVATVNDVAALYEALTGQRLRRLCRGSVED EEHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LRRQLVRARPEGVSVQVSSAELSLLSQLAGKGRLREPANAEYPRLRPMTLRDFLEARWMV HHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHE STSARATLPLASQP ECCCCEECCCCCCC >Mature Secondary Structure MDADITHVLLVGGTGRFGGRLASALLARPGIHLHVLVRPGTRSDALVRLAEHGVTLVSGT CCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECC LDDMRSLDSALEGVDAVVSAVSGPPEVQVAGQLRLLDSARRHGVIRFIPSDYSLDYTDAD HHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCEEEECCCCCCCCCCCCC AGDAFMDAHRRVADAVVKSGVPHSFVLCGAFMETALSPQAQVFDFERGVVSYWGTGDEPF CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHEECCCCCEEECCCCCCCE DVTAMADAARWVAEVVVDPHAAGRRLEFVGDVATVNDVAALYEALTGQRLRRLCRGSVED EEHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LRRQLVRARPEGVSVQVSSAELSLLSQLAGKGRLREPANAEYPRLRPMTLRDFLEARWMV HHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHE STSARATLPLASQP ECCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA