| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is chiA [H]
Identifier: 108759376
GI number: 108759376
Start: 4147966
End: 4153308
Strand: Direct
Name: chiA [H]
Synonym: MXAN_3564
Alternate gene names: 108759376
Gene position: 4147966-4153308 (Clockwise)
Preceding gene: 108760520
Following gene: 108763549
Centisome position: 45.38
GC content: 67.71
Gene sequence:
>5343_bases ATGGAGTTTCCCCACGTGAGAAGGTTGGTTGCCACGCTGTCCGGGCTTGCCCTGGTACTGTCCGGTACCAGTTCCGTCGC CCGGACGCTGCCGAACTATGATGCACTCCAGGACGCGAAGCCCGCGGGCCGTGCCGCCGCGGGATTCAAGCCGGTCAACA GCAGCCTGAAGGGGGCGCGGGTCGCCCACAAGGACTCGCTGACCGGTTCCCCGACGTTCATCTGGACGCACCCGACCTCG GAGCAGACGAAGCTCCGTGGCGAGTACGCGAAGATGTCTCCCGCCAAGGCGGCGCTGGCGCAGATTTCTGCCCACGCTCC TCTCTACGGTCTCGCTTCGTTTGAGGCCGCGGGCGCGACGGTCACCAACGTCAGCACCAACACGCAGGGCGTGAAGGTCG TGACGCTGGCCCAGGAGTCCTCGGGAATCGAGGTCTTCCGCCAGTCGCTGAAGGTGCTGCTGAACAAGCACAATCAGGTG GTTGCCATCTCCGGCAGCCTCTCCAAGCACGGTTCCGCGGAGATCCCCAAGGGCAAGGCGCGCTTCACCGTGCCCGCGAC CGAGGCGATCGCCGTGGCCTACAAGGACCTCACGGGCGCCGCGCTGGACCGCAACCTGCTCACCCGCGTGAGCGACGCGA AGAAGGGCGACAAGTACTCGCACTTCACGCTGGCCAGCTACGCGCGTCCGCTCGAGGAGGGGTTTGTCATCCCCGCCCGC GCGAAGCAGGTCTACTTCCCGCTGCCTGGCAAGCTGGTCCCCGCGTACTACGTGGAGATCAACACGAGCCGCGCGAACAG CGTGGACTCGGACTACTTCGCGTACGTCATCTCCGCCACCGACGGTCAGTTGCTGATGCGCAACAACCTGACGGCGCACG CGGAGTTCAGCTACCGCGTGTTCTCGGACACGACGCCGCCGTACACCCCGCACGACGGTCCGATCGGCAGCGGCGGTACG CCGCACCCGACCGGCAACCCGGACGGCTACCAGTCGCCGTACGTTCCGGCGAACCTGATCACCCTCGAGAGCCTCCCGTT CAGCCGGAACGATCCCTGGCTGCCGGACGGCGCGACGGAGACGCAGGGTAACAACGTCGACGCGTACGCGGACCTCGCCG ATCCGGACTACTACAGCCCCGGCGACCTCCGTGCTTCCGTCACGGCCCCGGGCGTGTTCGACCGGATCATCGACTTCGGC ATCCAGCCGAACGCCAACAACGAGCAGATCGCCGCGGCGACGACGAGCCTGTTCTTCCTGAACAACTGGCTCCACGACTG GTACTACGACGCCGGGTTCGACGAGGCCTCCGGCAACGCCCAGCATGACAACTTCGGGCGTGGCGGCGTGGGCGGTGACC GTCTGCATGCGCAGGCGCAGGACTACAGCGGCACCGACAACGCCAACATGCGCACGCCGGCGGACGGTGCGTCGCCGCGC ATGCAGATGTACCTGTTCGCCGGGGCGCGCAACTCGCGTCTGACGGCGAACGCTCCGGCGGAGGTCGCGGGTGACTACGA GGGTGGCGTCTCCTCCACCTTCGGTCCGCAGACCTTCAACGTCACCGGCGACGTGGTCGCGGCGCTGGATGCCGCCAACA CCGCCGGCCCGACGGACCGTGACGGCTGCACCGCGCTGACCAACGCGGCCGAGGTCGTTGGCAAGATCGCCATCATCGAC CGCGGCACCTGCGGCTTCGTCGACAAGGTGACCAACGCGCAGAACGCGGGCGCCATCGGCGTCATCATCCACGACAACGT CGCGGGTCCCACGATCGACCTGGGCGGCGACTCCACCACCATCACCATCCCCACGCTTCGCGTGAACCTGGATGATGGCA ACGTGCTGCGCAGCGGCCTGCCGGCGCTCAACGTCACCCTGTGGCGTGGCCCGACCGCGTGGATCGACGGCACCATCGAC AACGCCATCGTGGCGCACGAGTGGGGCCACTACATCAGCAACCGCCTTGTCGCGAACTCGTCCGGTCTGGTGAACAACCA GGGCCGCTCGATGGGCGAGGGCTGGGGTGACTTCACCGCCCTGCTGATGATGGTTCGCGCCGAGGACATCAACGTCCCGT CCAACGCGAACTGGAACGGCGCCTACGCCGCCGCGGGCTACGCCACGCGCGCGGACGCGAACTCCGAGTTCTTCGGTATC CGCCGTGGCACGTACTCGTCGGACCAGACCAAGAACGCGCTGTCGTTCCGTCACATCATGGACGGCGTGGCGCTGCCCAC GGGTGTGCCGTTCAACGGCAACACGGGTCAGCCGAACTCGCAGGTTCACAACTCCGGCGAGATCTGGGCGACGATGCTGT GGGAGTGCTACACGTCGCTGCTCCGCGCGCATCCGTTCCAGGAGGCGCAGGACCGGATGAAGAGCTACCTGGTGAACGGG TACAAGCTCACGCCGGCGGCCCCCACGTACCTGGAGGCGCGTGACGCCGTCATCGCGGCGGCCTACGCCAACGACCCGGC GGACGCCGAGCGGTTCTGGACGGCCTTCGCCAAGCGCGGCGCGGGCGTCGGCGCCGTGGCTCCGGACCGCTACTCCACGA ACCACGCCGGTGTCGTGGAGAGCTTCGTGGTCGGTTCGGCCATCCAGATTGTGTCGGCCGAGTTCATCGACGACGTCGAG GCTGGCTCGTGCGACCTCGACGGCATCCTGGACAACGGTGAGACGGGCCGCATCGAGGTCACCGTGCGCAACGCGGGCGC ACTGCCTGCGTCCGCCTCCAGCGTCAACCTGTCCTCCGCCTTCTCGGGTCTCGAGTTCGGCAACGGTGGTCAGGCAAGCT TCCCGGCCATCCCCGTGTTCGGTACGGCCACGGTCTCCATCCCGGTCTCGCTCACGGGCGCGACGGGCCAGCAGGACGTG ACCATCGACATCGCGGCGCGTGATGCGGGCCAGGCGATCCCCGGCGACATCACGGACAGCATCATCCTCACGACGCACTT CGACGAGCGTGAGAACTCCTCCAACATCGAGGACGTTCAGATCTCCCCGTCCAAGCTGCCTTGGGAAACCGAGTACGACG AGGCCCTGACCCCGGCCGCGTTCAGCGTGGTCACGTTCCCGGACGGCAACCGCACGTTCTACGCGGAGAACACCGCTTCC TACGCCGACGTTCGCCTCATCTCGCCTGAGCTGCACGTCAGCGCGACCGAGCCCTTCGTGATCAACTTCATGCACGCTTG GGACTTCGAGGATGACTACGACGGCGCCACGGTCGAAATCTCCGAGGACGGTGGCCAGACCTGGGTGGACATCGGCGATC CGATCCACAACTCGGTTCTTGAGACCTACCCGGGCAACCTGAACCCGCTGGCTGGCAAGCCCGCGCTGTCCAGCTACAAC CCTCAGTTCCCGGGCATGCTCCCTGCGACCATCGACCTGGGCACGGCCTACGCCGGCAAGACGGTGCAGGTCCGCTTCCG GGTCGGTACGGACGAGAGCGGCGGCTACACGGGCTGGCTGCTGGACGACCTCGAGTTCAACGGCATCACGAACACTCCGT TCGCCACCATCGCGCCCGAGGATGGCGTTTGTGTGAACCCCTGGCCCATCGCCAACGCCGGTCCGGACCGGTCCATCGCG CCGGGTGAACTGGTGAGCCTCTACGGTTCGGCTGCCGATCCGGAAGGCCAGCCGGTGACCTTCACCTGGGCACAGACGTC TGGCCCTGCGGTCACCCTGGCGGGTGCCAACACCCTGAACCCGTCGTTCACGGCGCCGCAGGTTACCGAGTCCACCGCAC TGGTGTTCACGCTGACCGTCTCCGACGGCGTCAAGACGTCCACGGACTCGGTGACCGTGACGGTGGCGCTCCCCAACAAT CCGCCCACCGTGAACGCGGGCCTCGACGGCATCGTCGAGGAGCGCGCTGAGTACACGCTGAGCGGCTCCGCCAGCGATGC GGATGGCAATGCCCTCACGTACCTGTGGACCCAGGTCTCCGGTACGCCGGTGGCGGTGAAGGACTACACCACGCCGACGG CGACGTTCATCGCGCCCGAGGTCACGCTGGATGAGTCGCTGGTCTTCCGTCTGACGGTCAGCGACGGCATCGCCACGGTG AACGACACGGTCACCGTGACGGTCACCAACGCGAACCGCGCGCCCATCGTCTCCGACACGTCCGTGGCCTTCGCCGCGGG CACTGTCACCGTGACGGCCTCCGCGGTCGACCCGGATGGTGACGCGCTCAGCTACAGCTGGGAGCAGACGGGTGGTTCGA CGGTCGCCATCAATGGCGCCGACACGTCCGCCATCTCCTTCGCCACCCCGGTCCCGGGTTCGTACGAGTTCACCGTGACG GCGACGGACGGCTCGGCCTCTGCCTCCAAGGCGGTGCCGGTGACCATCATCGATGGTTCTCTGCCGGCGAACTCTGCGCC GACCGTGAACGCGGGCATCGATGCCACGGCGAACGCTGGTGACGTCGTGACGCTCAGCGGCTCCGCGAGCGACGCCGAGG GTGACACGCTGACGTACCACTGGGAGCAGATCGGTGGCACGGATGTGACCCTGACGGGCGCCGACACCCTGACGCCGTCG TTCACCGCGCCGAGCACGGCCAGCGGTACCACGCTCGGCTTCATCCTGACGGTCAGCGATGGCACCTCGACCACCAGCGA TGCCGTGCGCGTCATCGTGGCGGCGGACCCGGGTGCCAACCCGAGCAACACTGCTCCGGAAGCGGACGCGGGCGAGTCGG CCATCGTGGCGGAGGGCGCCACTGTGACGCTCAACGGCACGGCGACCGACGCTGACGGTGACACGCTCGTCATCGTCTGG ACGCAGATCGGCGGCACGCCCGTGACGCTGTCTGACGCGTCCTCGCTGACGCCGACGTTCACCGCCCCGGCCTCCTCCGA TCCGCTGACCTTCCTCCTGATGGTCAGCGACGGTACGGCGACTGTCGTCGACGTGACGTCCATCAGCGTGACCGAGGAGA ACGTCGCGCCGGTGGCGTCCGCTCGCGCGGTGCTCTCTGGCAACCAGACGTCGGCCACGCTCGACGGCTCGGCTTCCAGC GACGCGAACGGCGATGTGCTGACGTACCGCTGGACGCAGGTCTCCGGCCCGAACGCGACCATCTCCGGCGCGGACCAGGC GGTTGCGGTCGTCAACCTGCCTGACCTCGACGACAAGACGGCGTCGTTCTCGTTCCGCCTGACGGTGAAGGACTCCGCGG GCACCGAGAGCAGCACCACCGTGCAGTTCTCCGCCCGCAACGGCGGTGACAGCGGTGGCTGCTCCGCGACGGGCGCGGGC GCTCCGGTCGGCATGATCGGCCTGGCGCTGCTCGGCCTGCTGCGCCGCCGTCGTCTGAACTGA
Upstream 100 bases:
>100_bases TGTCACTTGGTCGCCTTCTGACCGTGACTGGGAGTTTCGGCGATGGGGCCGGAACCTTGGACCCAGGCTGTAAGGAGGGC GACCACCCCCGCCGTCGTAA
Downstream 100 bases:
>100_bases GACGCGCGGGTCCTCCTCCTGCCTCCGGGTGGGAGGAGGCCTCCGCGGGGCCCGGATGAAGTGAGTGTCCGGGCGCCGCG GAACGCCGACTGAAGATGAA
Product: M36 family peptidase
Products: NA
Alternate protein names: CHI-A [H]
Number of amino acids: Translated: 1780; Mature: 1780
Protein sequence:
>1780_residues MEFPHVRRLVATLSGLALVLSGTSSVARTLPNYDALQDAKPAGRAAAGFKPVNSSLKGARVAHKDSLTGSPTFIWTHPTS EQTKLRGEYAKMSPAKAALAQISAHAPLYGLASFEAAGATVTNVSTNTQGVKVVTLAQESSGIEVFRQSLKVLLNKHNQV VAISGSLSKHGSAEIPKGKARFTVPATEAIAVAYKDLTGAALDRNLLTRVSDAKKGDKYSHFTLASYARPLEEGFVIPAR AKQVYFPLPGKLVPAYYVEINTSRANSVDSDYFAYVISATDGQLLMRNNLTAHAEFSYRVFSDTTPPYTPHDGPIGSGGT PHPTGNPDGYQSPYVPANLITLESLPFSRNDPWLPDGATETQGNNVDAYADLADPDYYSPGDLRASVTAPGVFDRIIDFG IQPNANNEQIAAATTSLFFLNNWLHDWYYDAGFDEASGNAQHDNFGRGGVGGDRLHAQAQDYSGTDNANMRTPADGASPR MQMYLFAGARNSRLTANAPAEVAGDYEGGVSSTFGPQTFNVTGDVVAALDAANTAGPTDRDGCTALTNAAEVVGKIAIID RGTCGFVDKVTNAQNAGAIGVIIHDNVAGPTIDLGGDSTTITIPTLRVNLDDGNVLRSGLPALNVTLWRGPTAWIDGTID NAIVAHEWGHYISNRLVANSSGLVNNQGRSMGEGWGDFTALLMMVRAEDINVPSNANWNGAYAAAGYATRADANSEFFGI RRGTYSSDQTKNALSFRHIMDGVALPTGVPFNGNTGQPNSQVHNSGEIWATMLWECYTSLLRAHPFQEAQDRMKSYLVNG YKLTPAAPTYLEARDAVIAAAYANDPADAERFWTAFAKRGAGVGAVAPDRYSTNHAGVVESFVVGSAIQIVSAEFIDDVE AGSCDLDGILDNGETGRIEVTVRNAGALPASASSVNLSSAFSGLEFGNGGQASFPAIPVFGTATVSIPVSLTGATGQQDV TIDIAARDAGQAIPGDITDSIILTTHFDERENSSNIEDVQISPSKLPWETEYDEALTPAAFSVVTFPDGNRTFYAENTAS YADVRLISPELHVSATEPFVINFMHAWDFEDDYDGATVEISEDGGQTWVDIGDPIHNSVLETYPGNLNPLAGKPALSSYN PQFPGMLPATIDLGTAYAGKTVQVRFRVGTDESGGYTGWLLDDLEFNGITNTPFATIAPEDGVCVNPWPIANAGPDRSIA PGELVSLYGSAADPEGQPVTFTWAQTSGPAVTLAGANTLNPSFTAPQVTESTALVFTLTVSDGVKTSTDSVTVTVALPNN PPTVNAGLDGIVEERAEYTLSGSASDADGNALTYLWTQVSGTPVAVKDYTTPTATFIAPEVTLDESLVFRLTVSDGIATV NDTVTVTVTNANRAPIVSDTSVAFAAGTVTVTASAVDPDGDALSYSWEQTGGSTVAINGADTSAISFATPVPGSYEFTVT ATDGSASASKAVPVTIIDGSLPANSAPTVNAGIDATANAGDVVTLSGSASDAEGDTLTYHWEQIGGTDVTLTGADTLTPS FTAPSTASGTTLGFILTVSDGTSTTSDAVRVIVAADPGANPSNTAPEADAGESAIVAEGATVTLNGTATDADGDTLVIVW TQIGGTPVTLSDASSLTPTFTAPASSDPLTFLLMVSDGTATVVDVTSISVTEENVAPVASARAVLSGNQTSATLDGSASS DANGDVLTYRWTQVSGPNATISGADQAVAVVNLPDLDDKTASFSFRLTVKDSAGTESSTTVQFSARNGGDSGGCSATGAG APVGMIGLALLGLLRRRRLN
Sequences:
>Translated_1780_residues MEFPHVRRLVATLSGLALVLSGTSSVARTLPNYDALQDAKPAGRAAAGFKPVNSSLKGARVAHKDSLTGSPTFIWTHPTS EQTKLRGEYAKMSPAKAALAQISAHAPLYGLASFEAAGATVTNVSTNTQGVKVVTLAQESSGIEVFRQSLKVLLNKHNQV VAISGSLSKHGSAEIPKGKARFTVPATEAIAVAYKDLTGAALDRNLLTRVSDAKKGDKYSHFTLASYARPLEEGFVIPAR AKQVYFPLPGKLVPAYYVEINTSRANSVDSDYFAYVISATDGQLLMRNNLTAHAEFSYRVFSDTTPPYTPHDGPIGSGGT PHPTGNPDGYQSPYVPANLITLESLPFSRNDPWLPDGATETQGNNVDAYADLADPDYYSPGDLRASVTAPGVFDRIIDFG IQPNANNEQIAAATTSLFFLNNWLHDWYYDAGFDEASGNAQHDNFGRGGVGGDRLHAQAQDYSGTDNANMRTPADGASPR MQMYLFAGARNSRLTANAPAEVAGDYEGGVSSTFGPQTFNVTGDVVAALDAANTAGPTDRDGCTALTNAAEVVGKIAIID RGTCGFVDKVTNAQNAGAIGVIIHDNVAGPTIDLGGDSTTITIPTLRVNLDDGNVLRSGLPALNVTLWRGPTAWIDGTID NAIVAHEWGHYISNRLVANSSGLVNNQGRSMGEGWGDFTALLMMVRAEDINVPSNANWNGAYAAAGYATRADANSEFFGI RRGTYSSDQTKNALSFRHIMDGVALPTGVPFNGNTGQPNSQVHNSGEIWATMLWECYTSLLRAHPFQEAQDRMKSYLVNG YKLTPAAPTYLEARDAVIAAAYANDPADAERFWTAFAKRGAGVGAVAPDRYSTNHAGVVESFVVGSAIQIVSAEFIDDVE AGSCDLDGILDNGETGRIEVTVRNAGALPASASSVNLSSAFSGLEFGNGGQASFPAIPVFGTATVSIPVSLTGATGQQDV TIDIAARDAGQAIPGDITDSIILTTHFDERENSSNIEDVQISPSKLPWETEYDEALTPAAFSVVTFPDGNRTFYAENTAS YADVRLISPELHVSATEPFVINFMHAWDFEDDYDGATVEISEDGGQTWVDIGDPIHNSVLETYPGNLNPLAGKPALSSYN PQFPGMLPATIDLGTAYAGKTVQVRFRVGTDESGGYTGWLLDDLEFNGITNTPFATIAPEDGVCVNPWPIANAGPDRSIA PGELVSLYGSAADPEGQPVTFTWAQTSGPAVTLAGANTLNPSFTAPQVTESTALVFTLTVSDGVKTSTDSVTVTVALPNN PPTVNAGLDGIVEERAEYTLSGSASDADGNALTYLWTQVSGTPVAVKDYTTPTATFIAPEVTLDESLVFRLTVSDGIATV NDTVTVTVTNANRAPIVSDTSVAFAAGTVTVTASAVDPDGDALSYSWEQTGGSTVAINGADTSAISFATPVPGSYEFTVT ATDGSASASKAVPVTIIDGSLPANSAPTVNAGIDATANAGDVVTLSGSASDAEGDTLTYHWEQIGGTDVTLTGADTLTPS FTAPSTASGTTLGFILTVSDGTSTTSDAVRVIVAADPGANPSNTAPEADAGESAIVAEGATVTLNGTATDADGDTLVIVW TQIGGTPVTLSDASSLTPTFTAPASSDPLTFLLMVSDGTATVVDVTSISVTEENVAPVASARAVLSGNQTSATLDGSASS DANGDVLTYRWTQVSGPNATISGADQAVAVVNLPDLDDKTASFSFRLTVKDSAGTESSTTVQFSARNGGDSGGCSATGAG APVGMIGLALLGLLRRRRLN >Mature_1780_residues MEFPHVRRLVATLSGLALVLSGTSSVARTLPNYDALQDAKPAGRAAAGFKPVNSSLKGARVAHKDSLTGSPTFIWTHPTS EQTKLRGEYAKMSPAKAALAQISAHAPLYGLASFEAAGATVTNVSTNTQGVKVVTLAQESSGIEVFRQSLKVLLNKHNQV VAISGSLSKHGSAEIPKGKARFTVPATEAIAVAYKDLTGAALDRNLLTRVSDAKKGDKYSHFTLASYARPLEEGFVIPAR AKQVYFPLPGKLVPAYYVEINTSRANSVDSDYFAYVISATDGQLLMRNNLTAHAEFSYRVFSDTTPPYTPHDGPIGSGGT PHPTGNPDGYQSPYVPANLITLESLPFSRNDPWLPDGATETQGNNVDAYADLADPDYYSPGDLRASVTAPGVFDRIIDFG IQPNANNEQIAAATTSLFFLNNWLHDWYYDAGFDEASGNAQHDNFGRGGVGGDRLHAQAQDYSGTDNANMRTPADGASPR MQMYLFAGARNSRLTANAPAEVAGDYEGGVSSTFGPQTFNVTGDVVAALDAANTAGPTDRDGCTALTNAAEVVGKIAIID RGTCGFVDKVTNAQNAGAIGVIIHDNVAGPTIDLGGDSTTITIPTLRVNLDDGNVLRSGLPALNVTLWRGPTAWIDGTID NAIVAHEWGHYISNRLVANSSGLVNNQGRSMGEGWGDFTALLMMVRAEDINVPSNANWNGAYAAAGYATRADANSEFFGI RRGTYSSDQTKNALSFRHIMDGVALPTGVPFNGNTGQPNSQVHNSGEIWATMLWECYTSLLRAHPFQEAQDRMKSYLVNG YKLTPAAPTYLEARDAVIAAAYANDPADAERFWTAFAKRGAGVGAVAPDRYSTNHAGVVESFVVGSAIQIVSAEFIDDVE AGSCDLDGILDNGETGRIEVTVRNAGALPASASSVNLSSAFSGLEFGNGGQASFPAIPVFGTATVSIPVSLTGATGQQDV TIDIAARDAGQAIPGDITDSIILTTHFDERENSSNIEDVQISPSKLPWETEYDEALTPAAFSVVTFPDGNRTFYAENTAS YADVRLISPELHVSATEPFVINFMHAWDFEDDYDGATVEISEDGGQTWVDIGDPIHNSVLETYPGNLNPLAGKPALSSYN PQFPGMLPATIDLGTAYAGKTVQVRFRVGTDESGGYTGWLLDDLEFNGITNTPFATIAPEDGVCVNPWPIANAGPDRSIA PGELVSLYGSAADPEGQPVTFTWAQTSGPAVTLAGANTLNPSFTAPQVTESTALVFTLTVSDGVKTSTDSVTVTVALPNN PPTVNAGLDGIVEERAEYTLSGSASDADGNALTYLWTQVSGTPVAVKDYTTPTATFIAPEVTLDESLVFRLTVSDGIATV NDTVTVTVTNANRAPIVSDTSVAFAAGTVTVTASAVDPDGDALSYSWEQTGGSTVAINGADTSAISFATPVPGSYEFTVT ATDGSASASKAVPVTIIDGSLPANSAPTVNAGIDATANAGDVVTLSGSASDAEGDTLTYHWEQIGGTDVTLTGADTLTPS FTAPSTASGTTLGFILTVSDGTSTTSDAVRVIVAADPGANPSNTAPEADAGESAIVAEGATVTLNGTATDADGDTLVIVW TQIGGTPVTLSDASSLTPTFTAPASSDPLTFLLMVSDGTATVVDVTSISVTEENVAPVASARAVLSGNQTSATLDGSASS DANGDVLTYRWTQVSGPNATISGADQAVAVVNLPDLDDKTASFSFRLTVKDSAGTESSTTVQFSARNGGDSGGCSATGAG APVGMIGLALLGLLRRRRLN
Specific function: Unknown
COG id: COG3979
COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 18 family. Chitinase class II subfamily [H]
Homologues:
Organism=Homo sapiens, GI270265857, Length=429, Percent_Identity=27.5058275058275, Blast_Score=87, Evalue=1e-16, Organism=Homo sapiens, GI270265853, Length=429, Percent_Identity=27.5058275058275, Blast_Score=87, Evalue=2e-16, Organism=Homo sapiens, GI270265855, Length=429, Percent_Identity=27.5058275058275, Blast_Score=87, Evalue=2e-16, Organism=Homo sapiens, GI134304840, Length=429, Percent_Identity=27.5058275058275, Blast_Score=87, Evalue=2e-16, Organism=Homo sapiens, GI270265859, Length=429, Percent_Identity=27.5058275058275, Blast_Score=86, Evalue=3e-16, Organism=Homo sapiens, GI33359221, Length=277, Percent_Identity=28.158844765343, Blast_Score=74, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002126 - InterPro: IPR003610 - InterPro: IPR011583 - InterPro: IPR013540 - InterPro: IPR001223 - InterPro: IPR001579 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR022409 [H]
Pfam domain/function: PF02839 CBM_5_12; PF08329 ChitinaseA_N; PF00704 Glyco_hydro_18 [H]
EC number: =3.2.1.14 [H]
Molecular weight: Translated: 185185; Mature: 185185
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS50093 PKD ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFPHVRRLVATLSGLALVLSGTSSVARTLPNYDALQDAKPAGRAAAGFKPVNSSLKGAR CCCHHHHHHHHHHCCEEEEEECCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCE VAHKDSLTGSPTFIWTHPTSEQTKLRGEYAKMSPAKAALAQISAHAPLYGLASFEAAGAT EEECCCCCCCCEEEEECCCCCHHHHCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCE VTNVSTNTQGVKVVTLAQESSGIEVFRQSLKVLLNKHNQVVAISGSLSKHGSAEIPKGKA EEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCE RFTVPATEAIAVAYKDLTGAALDRNLLTRVSDAKKGDKYSHFTLASYARPLEEGFVIPAR EEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCHHHHCEEEECC AKQVYFPLPGKLVPAYYVEINTSRANSVDSDYFAYVISATDGQLLMRNNLTAHAEFSYRV CCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEEEEEE FSDTTPPYTPHDGPIGSGGTPHPTGNPDGYQSPYVPANLITLESLPFSRNDPWLPDGATE ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC TQGNNVDAYADLADPDYYSPGDLRASVTAPGVFDRIIDFGIQPNANNEQIAAATTSLFFL CCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHH NNWLHDWYYDAGFDEASGNAQHDNFGRGGVGGDRLHAQAQDYSGTDNANMRTPADGASPR HHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC MQMYLFAGARNSRLTANAPAEVAGDYEGGVSSTFGPQTFNVTGDVVAALDAANTAGPTDR EEEEEEECCCCCEEECCCCHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCC DGCTALTNAAEVVGKIAIIDRGTCGFVDKVTNAQNAGAIGVIIHDNVAGPTIDLGGDSTT CCCHHHHHHHHHHEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCEE ITIPTLRVNLDDGNVLRSGLPALNVTLWRGPTAWIDGTIDNAIVAHEWGHYISNRLVANS EEEEEEEEECCCCCHHHCCCCEEEEEEECCCCEEECCCCCCEEEEHHHHHHHHCEEEECC SGLVNNQGRSMGEGWGDFTALLMMVRAEDINVPSNANWNGAYAAAGYATRADANSEFFGI CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCEEEE RRGTYSSDQTKNALSFRHIMDGVALPTGVPFNGNTGQPNSQVHNSGEIWATMLWECYTSL ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LRAHPFQEAQDRMKSYLVNGYKLTPAAPTYLEARDAVIAAAYANDPADAERFWTAFAKRG HHCCCHHHHHHHHHHHHHCCEEECCCCCCCEECCCEEEEEEECCCCCHHHHHHHHHHHCC AGVGAVAPDRYSTNHAGVVESFVVGSAIQIVSAEFIDDVEAGSCDLDGILDNGETGRIEV CCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHHHHCCCCCCCCCCCCEECCCCCCEEEE TVRNAGALPASASSVNLSSAFSGLEFGNGGQASFPAIPVFGTATVSIPVSLTGATGQQDV EEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCEE TIDIAARDAGQAIPGDITDSIILTTHFDERENSSNIEDVQISPSKLPWETEYDEALTPAA EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE FSVVTFPDGNRTFYAENTASYADVRLISPELHVSATEPFVINFMHAWDFEDDYDGATVEI EEEEECCCCCEEEEECCCCCEEEEEEECCCEEEECCCCEEEEEEEECCCCCCCCCCEEEE SEDGGQTWVDIGDPIHNSVLETYPGNLNPLAGKPALSSYNPQFPGMLPATIDLGTAYAGK ECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC TVQVRFRVGTDESGGYTGWLLDDLEFNGITNTPFATIAPEDGVCVNPWPIANAGPDRSIA EEEEEEEECCCCCCCEEEEEEECEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC PGELVSLYGSAADPEGQPVTFTWAQTSGPAVTLAGANTLNPSFTAPQVTESTALVFTLTV CCHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE SDGVKTSTDSVTVTVALPNNPPTVNAGLDGIVEERAEYTLSGSASDADGNALTYLWTQVS CCCCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHCEEECCCCCCCCCCEEEEEEEECC GTPVAVKDYTTPTATFIAPEVTLDESLVFRLTVSDGIATVNDTVTVTVTNANRAPIVSDT CCEEEEECCCCCCEEEEECCEEECCEEEEEEEECCCEEEECCEEEEEEECCCCCCEEECC SVAFAAGTVTVTASAVDPDGDALSYSWEQTGGSTVAINGADTSAISFATPVPGSYEFTVT CEEEEEEEEEEEEEEECCCCCEEEEEHHCCCCCEEEEECCCCCEEEEECCCCCCEEEEEE ATDGSASASKAVPVTIIDGSLPANSAPTVNAGIDATANAGDVVTLSGSASDAEGDTLTYH ECCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEE WEQIGGTDVTLTGADTLTPSFTAPSTASGTTLGFILTVSDGTSTTSDAVRVIVAADPGAN EHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCC PSNTAPEADAGESAIVAEGATVTLNGTATDADGDTLVIVWTQIGGTPVTLSDASSLTPTF CCCCCCCCCCCCCEEEECCCEEEECCCEECCCCCEEEEEEEECCCEEEEECCCCCCCCEE TAPASSDPLTFLLMVSDGTATVVDVTSISVTEENVAPVASARAVLSGNQTSATLDGSASS ECCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHEECCCCCCEEECCCCCC DANGDVLTYRWTQVSGPNATISGADQAVAVVNLPDLDDKTASFSFRLTVKDSAGTESSTT CCCCCEEEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEE VQFSARNGGDSGGCSATGAGAPVGMIGLALLGLLRRRRLN EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEFPHVRRLVATLSGLALVLSGTSSVARTLPNYDALQDAKPAGRAAAGFKPVNSSLKGAR CCCHHHHHHHHHHCCEEEEEECCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCE VAHKDSLTGSPTFIWTHPTSEQTKLRGEYAKMSPAKAALAQISAHAPLYGLASFEAAGAT EEECCCCCCCCEEEEECCCCCHHHHCCHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCE VTNVSTNTQGVKVVTLAQESSGIEVFRQSLKVLLNKHNQVVAISGSLSKHGSAEIPKGKA EEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCE RFTVPATEAIAVAYKDLTGAALDRNLLTRVSDAKKGDKYSHFTLASYARPLEEGFVIPAR EEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCHHHHCEEEECC AKQVYFPLPGKLVPAYYVEINTSRANSVDSDYFAYVISATDGQLLMRNNLTAHAEFSYRV CCEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCEEEEEEEEEE FSDTTPPYTPHDGPIGSGGTPHPTGNPDGYQSPYVPANLITLESLPFSRNDPWLPDGATE ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC TQGNNVDAYADLADPDYYSPGDLRASVTAPGVFDRIIDFGIQPNANNEQIAAATTSLFFL CCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHH NNWLHDWYYDAGFDEASGNAQHDNFGRGGVGGDRLHAQAQDYSGTDNANMRTPADGASPR HHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC MQMYLFAGARNSRLTANAPAEVAGDYEGGVSSTFGPQTFNVTGDVVAALDAANTAGPTDR EEEEEEECCCCCEEECCCCHHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCC DGCTALTNAAEVVGKIAIIDRGTCGFVDKVTNAQNAGAIGVIIHDNVAGPTIDLGGDSTT CCCHHHHHHHHHHEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCEE ITIPTLRVNLDDGNVLRSGLPALNVTLWRGPTAWIDGTIDNAIVAHEWGHYISNRLVANS EEEEEEEEECCCCCHHHCCCCEEEEEEECCCCEEECCCCCCEEEEHHHHHHHHCEEEECC SGLVNNQGRSMGEGWGDFTALLMMVRAEDINVPSNANWNGAYAAAGYATRADANSEFFGI CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEECCCCCCEEEE RRGTYSSDQTKNALSFRHIMDGVALPTGVPFNGNTGQPNSQVHNSGEIWATMLWECYTSL ECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LRAHPFQEAQDRMKSYLVNGYKLTPAAPTYLEARDAVIAAAYANDPADAERFWTAFAKRG HHCCCHHHHHHHHHHHHHCCEEECCCCCCCEECCCEEEEEEECCCCCHHHHHHHHHHHCC AGVGAVAPDRYSTNHAGVVESFVVGSAIQIVSAEFIDDVEAGSCDLDGILDNGETGRIEV CCCCCCCCCCCCCCCCHHHHHHHHCCHHEEHHHHHHCCCCCCCCCCCCEECCCCCCEEEE TVRNAGALPASASSVNLSSAFSGLEFGNGGQASFPAIPVFGTATVSIPVSLTGATGQQDV EEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCCCCEE TIDIAARDAGQAIPGDITDSIILTTHFDERENSSNIEDVQISPSKLPWETEYDEALTPAA EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCE FSVVTFPDGNRTFYAENTASYADVRLISPELHVSATEPFVINFMHAWDFEDDYDGATVEI EEEEECCCCCEEEEECCCCCEEEEEEECCCEEEECCCCEEEEEEEECCCCCCCCCCEEEE SEDGGQTWVDIGDPIHNSVLETYPGNLNPLAGKPALSSYNPQFPGMLPATIDLGTAYAGK ECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC TVQVRFRVGTDESGGYTGWLLDDLEFNGITNTPFATIAPEDGVCVNPWPIANAGPDRSIA EEEEEEEECCCCCCCEEEEEEECEEECCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCC PGELVSLYGSAADPEGQPVTFTWAQTSGPAVTLAGANTLNPSFTAPQVTESTALVFTLTV CCHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEEE SDGVKTSTDSVTVTVALPNNPPTVNAGLDGIVEERAEYTLSGSASDADGNALTYLWTQVS CCCCCCCCCCEEEEEEECCCCCEECCCCHHHHHHHHCEEECCCCCCCCCCEEEEEEEECC GTPVAVKDYTTPTATFIAPEVTLDESLVFRLTVSDGIATVNDTVTVTVTNANRAPIVSDT CCEEEEECCCCCCEEEEECCEEECCEEEEEEEECCCEEEECCEEEEEEECCCCCCEEECC SVAFAAGTVTVTASAVDPDGDALSYSWEQTGGSTVAINGADTSAISFATPVPGSYEFTVT CEEEEEEEEEEEEEEECCCCCEEEEEHHCCCCCEEEEECCCCCEEEEECCCCCCEEEEEE ATDGSASASKAVPVTIIDGSLPANSAPTVNAGIDATANAGDVVTLSGSASDAEGDTLTYH ECCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEE WEQIGGTDVTLTGADTLTPSFTAPSTASGTTLGFILTVSDGTSTTSDAVRVIVAADPGAN EHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCC PSNTAPEADAGESAIVAEGATVTLNGTATDADGDTLVIVWTQIGGTPVTLSDASSLTPTF CCCCCCCCCCCCCEEEECCCEEEECCCEECCCCCEEEEEEEECCCEEEEECCCCCCCCEE TAPASSDPLTFLLMVSDGTATVVDVTSISVTEENVAPVASARAVLSGNQTSATLDGSASS ECCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHEECCCCCCEEECCCCCC DANGDVLTYRWTQVSGPNATISGADQAVAVVNLPDLDDKTASFSFRLTVKDSAGTESSTT CCCCCEEEEEEEEECCCCCEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEE VQFSARNGGDSGGCSATGAGAPVGMIGLALLGLLRRRRLN EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8416892; 1464065; 7764022 [H]