| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is ftsI [H]
Identifier: 108760422
GI number: 108760422
Start: 6974382
End: 6976400
Strand: Reverse
Name: ftsI [H]
Synonym: MXAN_5610
Alternate gene names: 108760422
Gene position: 6976400-6974382 (Counterclockwise)
Preceding gene: 108758344
Following gene: 108761901
Centisome position: 76.33
GC content: 69.39
Gene sequence:
>2019_bases GTGAGGGATTTCAAGGCGGCGCGGGCTCCCGAGCCCAACGCGAAGTGGCTGAAGCTGCGGGTACGGCTGCTGTTCGGGCT GTTCCTGATGCTGCTCGGCGTCGCCTTTGGTCGTGCGGTGCAGCTCCAGGTCTTCGAGCAGGAGAAGCTGCGCGGCATGG CGCAGGACCAGTACGTCCGGCACATCGAGATTCCGGCCCGCCGCGGCGACATCTTCGACCGGCGCGGCACGCCGCTGGCC CAGAGCGTGGAGGTGGACTCCATCTGGGTGGACCCCTCCATGCTGCCCGACGTGAAGGCCGCGTCCCGGGCGCTGGCCAA GGCGCTGAAGCTGGACCCGGACGAGCTGGGCGCGCGCCTGGCCCGGGCCAAGCGCTTCGCCTGGGTGAAACGCCAGGCCA AGCCCGCCGAGGTCGCCGCGGTGAAGGCGCTGGCGCTGCCGGGCATGGGCTTCTCCAAGGAGCCCAAGCGATTCTACCCC CAGCGAGAGCTGGGCGCCCACGTGGTGGGCACGGTGGGCATGGACGGCCGCGGCCTGGAGGGCCTGGAGTTGGCCTTCCA GGACGAGCTGTCCGGGCAGAACTCCTCCACCTCCGGCTTCCGTGACGCCAAGGGCCGCAAGCTGCTGGTGCAGGGCGCGT TGGATCCGCTCCAGCGCCAGGGCGCCGCCGTCACCCTCACGTTGGACCGCCACCTCCAGTACGTCGCGGAGAAGGCGCTC AGCCGCGCGGTGGAGGACGCCAAGGCCGTGGCCGGCATGGCGGTGGTGTTGGATCCGCGCACGGGCGAGCTGCTCGCCGT CGCCAACCACCCGCGCTTCAACCCCAATACGCCGGAGTCCAGCTCGCGCTCGGGCATGCGCAACCGCGCCGCCCTGGACA CCTTCGAGCCGGGCTCCACGCTGAAGGCCTTCGTGGTGGCCGCGGCGATGGAAGAGAAGGCCATCACCGCCGACAGCCTC TTCTTCTGTGAGAATGGCGCCTGGCGGGTGGGCCGCCATACCATCAACGACACCCATTCCTACGGCTGGCTCACCCCGCA GGGCATCCTCCAGAAGTCCTCCAACATCTGTATGGCGAAGATTGCCCAGGCCATGGGACGGGAGAAGTTCGTGAAGGGCT ACCAGTCCTTCGGCTTCGCCGAGCGCACCGGCCTGTCCCTGCCGGGAGAGGGGCGCGGCGTCCTGCCGTTCCCGAAGGCG GAAGTCTCCCTGGCCACCCAGTCCTTCGGACAGGGGATGACGGCCACGGCGGTGCAGATTGCGGCCGCCTATGGTGCGCT GGCCAACGATGGGGTGCTGATGCGGCCCTATCTGGTGTCGAAGGTGGTGGACCCGGACGGTGTCGTTCTGCTGGAAAACC GTCCCACGGAGCTGCGCAGGGCGGTCTCCGCGAAGGTCGCCCGGCAGGTCGTGGGCATGCTCGAAAGCGTGGTGGTCAAG GGAGGGACGGCCACCAAGGCCGCCATGGAGGACTACCGGGTGGCCGGAAAGACGGGCACCGCGCAGAAGGCAGACCCGGT GGCGCGGGGGTATTCGGACAAGCGGATCGCCTCCTTTGTTGGGGTGGTACCGGCCGAGTCTCCGCGAGCAGTGATTCTTG TCGTAGTGGACGAACCCAAGACGGACGTATACGGGGGGACCGTGGCTGCCCCTGCTTTCAAGGAGATTGCGACCGCCGCC ATGGCTCACCTGGCCGTGCCCCCGTCCCGGACGGTGGCACCCGAGGTGGCCGTGGCCGCCGAGTCCCCTGCGCCTGCCGC GGCGAAACCGGGGGCGAATGCCTCCGGTGCCGCCCGGACGGCACTGGCGGACGCGGTGACGGAGACCCCTGAACCCGGCA CGGTGCGTGTGCCGGACCTTCAGGGAGAAGTAGGACGTGAGGCCGTGGTGAAGCTGCTCGCCGCGGCGCTGGAGCCACAG GTATTGGGCAGTGGACGCGTGGTATCTCAAACCCCCGCCGCCGGTTCACTGGTGGAGAAGGGGGCCCGGGTGACGCTGGA GCTCGCCGCGCGGCAATAA
Upstream 100 bases:
>100_bases TGTCGGCGGAGAAGCCGGCGCGTGACAGCGGGGCGCGCGCGGAGGTCCCGGACGCCACGCAGCCCACCGTCCGCGTGGCG GGCCGAGCCGGAGCCAGTCG
Downstream 100 bases:
>100_bases GGCCGCGTCCGCTCCAGGCCCCGCTCTTGCAATGCGTGTGAAGGGGAAGAGATGAAGCTGACGGATGTCCTCGCAGGATG TGGTGCCGAGCAGACCTCGG
Product: putative penicillin-binding protein
Products: NA
Alternate protein names: Penicillin-binding protein 3; PBP-3; Peptidoglycan glycosyltransferase 3 [H]
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MRDFKAARAPEPNAKWLKLRVRLLFGLFLMLLGVAFGRAVQLQVFEQEKLRGMAQDQYVRHIEIPARRGDIFDRRGTPLA QSVEVDSIWVDPSMLPDVKAASRALAKALKLDPDELGARLARAKRFAWVKRQAKPAEVAAVKALALPGMGFSKEPKRFYP QRELGAHVVGTVGMDGRGLEGLELAFQDELSGQNSSTSGFRDAKGRKLLVQGALDPLQRQGAAVTLTLDRHLQYVAEKAL SRAVEDAKAVAGMAVVLDPRTGELLAVANHPRFNPNTPESSSRSGMRNRAALDTFEPGSTLKAFVVAAAMEEKAITADSL FFCENGAWRVGRHTINDTHSYGWLTPQGILQKSSNICMAKIAQAMGREKFVKGYQSFGFAERTGLSLPGEGRGVLPFPKA EVSLATQSFGQGMTATAVQIAAAYGALANDGVLMRPYLVSKVVDPDGVVLLENRPTELRRAVSAKVARQVVGMLESVVVK GGTATKAAMEDYRVAGKTGTAQKADPVARGYSDKRIASFVGVVPAESPRAVILVVVDEPKTDVYGGTVAAPAFKEIATAA MAHLAVPPSRTVAPEVAVAAESPAPAAAKPGANASGAARTALADAVTETPEPGTVRVPDLQGEVGREAVVKLLAAALEPQ VLGSGRVVSQTPAAGSLVEKGARVTLELAARQ
Sequences:
>Translated_672_residues MRDFKAARAPEPNAKWLKLRVRLLFGLFLMLLGVAFGRAVQLQVFEQEKLRGMAQDQYVRHIEIPARRGDIFDRRGTPLA QSVEVDSIWVDPSMLPDVKAASRALAKALKLDPDELGARLARAKRFAWVKRQAKPAEVAAVKALALPGMGFSKEPKRFYP QRELGAHVVGTVGMDGRGLEGLELAFQDELSGQNSSTSGFRDAKGRKLLVQGALDPLQRQGAAVTLTLDRHLQYVAEKAL SRAVEDAKAVAGMAVVLDPRTGELLAVANHPRFNPNTPESSSRSGMRNRAALDTFEPGSTLKAFVVAAAMEEKAITADSL FFCENGAWRVGRHTINDTHSYGWLTPQGILQKSSNICMAKIAQAMGREKFVKGYQSFGFAERTGLSLPGEGRGVLPFPKA EVSLATQSFGQGMTATAVQIAAAYGALANDGVLMRPYLVSKVVDPDGVVLLENRPTELRRAVSAKVARQVVGMLESVVVK GGTATKAAMEDYRVAGKTGTAQKADPVARGYSDKRIASFVGVVPAESPRAVILVVVDEPKTDVYGGTVAAPAFKEIATAA MAHLAVPPSRTVAPEVAVAAESPAPAAAKPGANASGAARTALADAVTETPEPGTVRVPDLQGEVGREAVVKLLAAALEPQ VLGSGRVVSQTPAAGSLVEKGARVTLELAARQ >Mature_672_residues MRDFKAARAPEPNAKWLKLRVRLLFGLFLMLLGVAFGRAVQLQVFEQEKLRGMAQDQYVRHIEIPARRGDIFDRRGTPLA QSVEVDSIWVDPSMLPDVKAASRALAKALKLDPDELGARLARAKRFAWVKRQAKPAEVAAVKALALPGMGFSKEPKRFYP QRELGAHVVGTVGMDGRGLEGLELAFQDELSGQNSSTSGFRDAKGRKLLVQGALDPLQRQGAAVTLTLDRHLQYVAEKAL SRAVEDAKAVAGMAVVLDPRTGELLAVANHPRFNPNTPESSSRSGMRNRAALDTFEPGSTLKAFVVAAAMEEKAITADSL FFCENGAWRVGRHTINDTHSYGWLTPQGILQKSSNICMAKIAQAMGREKFVKGYQSFGFAERTGLSLPGEGRGVLPFPKA EVSLATQSFGQGMTATAVQIAAAYGALANDGVLMRPYLVSKVVDPDGVVLLENRPTELRRAVSAKVARQVVGMLESVVVK GGTATKAAMEDYRVAGKTGTAQKADPVARGYSDKRIASFVGVVPAESPRAVILVVVDEPKTDVYGGTVAAPAFKEIATAA MAHLAVPPSRTVAPEVAVAAESPAPAAAKPGANASGAARTALADAVTETPEPGTVRVPDLQGEVGREAVVKLLAAALEPQ VLGSGRVVSQTPAAGSLVEKGARVTLELAARQ
Specific function: Cell wall formation. Essential for the formation of a septum of the murein sacculus. Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side. Note=The bulk of the molecule, except for the N-terminal membrane anchor region, protrudes into the periplasmic space, where it acts on murein (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=568, Percent_Identity=36.6197183098592, Blast_Score=329, Evalue=4e-91, Organism=Escherichia coli, GI1786854, Length=632, Percent_Identity=25.6329113924051, Blast_Score=141, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: =2.4.1.129 [H]
Molecular weight: Translated: 71325; Mature: 71325
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFKAARAPEPNAKWLKLRVRLLFGLFLMLLGVAFGRAVQLQVFEQEKLRGMAQDQYVR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHCCCHHHHHEE HIEIPARRGDIFDRRGTPLAQSVEVDSIWVDPSMLPDVKAASRALAKALKLDPDELGARL EEECCCCCCCCCCCCCCCCHHCEEECEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ARAKRFAWVKRQAKPAEVAAVKALALPGMGFSKEPKRFYPQRELGAHVVGTVGMDGRGLE HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCEEEEEECCCCCCCC GLELAFQDELSGQNSSTSGFRDAKGRKLLVQGALDPLQRQGAAVTLTLDRHLQYVAEKAL CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCEEEEEHHHHHHHHHHHHH SRAVEDAKAVAGMAVVLDPRTGELLAVANHPRFNPNTPESSSRSGMRNRAALDTFEPGST HHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCH LKAFVVAAAMEEKAITADSLFFCENGAWRVGRHTINDTHSYGWLTPQGILQKSSNICMAK HHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCHHHHH IAQAMGREKFVKGYQSFGFAERTGLSLPGEGRGVLPFPKAEVSLATQSFGQGMTATAVQI HHHHHCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH AAAYGALANDGVLMRPYLVSKVVDPDGVVLLENRPTELRRAVSAKVARQVVGMLESVVVK HHHHHHHCCCCEEECHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGTATKAAMEDYRVAGKTGTAQKADPVARGYSDKRIASFVGVVPAESPRAVILVVVDEPK CCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCC TDVYGGTVAAPAFKEIATAAMAHLAVPPSRTVAPEVAVAAESPAPAAAKPGANASGAART CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH ALADAVTETPEPGTVRVPDLQGEVGREAVVKLLAAALEPQVLGSGRVVSQTPAAGSLVEK HHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHC GARVTLELAARQ CCEEEEEEECCC >Mature Secondary Structure MRDFKAARAPEPNAKWLKLRVRLLFGLFLMLLGVAFGRAVQLQVFEQEKLRGMAQDQYVR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHCCCHHHHHEE HIEIPARRGDIFDRRGTPLAQSVEVDSIWVDPSMLPDVKAASRALAKALKLDPDELGARL EEECCCCCCCCCCCCCCCCHHCEEECEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHH ARAKRFAWVKRQAKPAEVAAVKALALPGMGFSKEPKRFYPQRELGAHVVGTVGMDGRGLE HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCHHHCCEEEEEECCCCCCCC GLELAFQDELSGQNSSTSGFRDAKGRKLLVQGALDPLQRQGAAVTLTLDRHLQYVAEKAL CHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHCCCEEEEEHHHHHHHHHHHHH SRAVEDAKAVAGMAVVLDPRTGELLAVANHPRFNPNTPESSSRSGMRNRAALDTFEPGST HHHHHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCH LKAFVVAAAMEEKAITADSLFFCENGAWRVGRHTINDTHSYGWLTPQGILQKSSNICMAK HHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCHHHHHHCCCCHHHHH IAQAMGREKFVKGYQSFGFAERTGLSLPGEGRGVLPFPKAEVSLATQSFGQGMTATAVQI HHHHHCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH AAAYGALANDGVLMRPYLVSKVVDPDGVVLLENRPTELRRAVSAKVARQVVGMLESVVVK HHHHHHHCCCCEEECHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHC GGTATKAAMEDYRVAGKTGTAQKADPVARGYSDKRIASFVGVVPAESPRAVILVVVDEPK CCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCC TDVYGGTVAAPAFKEIATAAMAHLAVPPSRTVAPEVAVAAESPAPAAAKPGANASGAART CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH ALADAVTETPEPGTVRVPDLQGEVGREAVVKLLAAALEPQVLGSGRVVSQTPAAGSLVEK HHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHHC GARVTLELAARQ CCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]