| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is treS [H]
Identifier: 108759788
GI number: 108759788
Start: 4396077
End: 4397732
Strand: Reverse
Name: treS [H]
Synonym: MXAN_3684
Alternate gene names: 108759788
Gene position: 4397732-4396077 (Counterclockwise)
Preceding gene: 108762670
Following gene: 108758925
Centisome position: 48.12
GC content: 64.13
Gene sequence:
>1656_bases ATGGACCTGGATCCCCTCTGGTACAAGAAAGCCCTTATCTACGAGCTGCACCTGCGTGCCTTCCATGACTCCAATGGCGA CGGCCACGGGGACATCCCCGGTCTGATTGAGAAGCTTCCGTACCTCCAGGACCTGGGCATCAACTGCCTCTGGTTGCTGC CCCACTACCCTTCGCCGCTGCGCGACGATGGCTACGACATCGCGGACTTCTACGGCGTCCACCCGGACTACGGCACGCTC GCGGACTTCCAGCGACTGGTGGATGAGGCGCACAAGCGCGACATCCGCGTCATCACCGAGCTGGTGGTGAACCACACCAG TGACCAGCACCCCTGGTTCCAGGAAGCGCGCAGCGACCCCAACAGCCCCAAGCGCAACTGGTACGTCTGGAGCGACACCG ACGAACAGTACAAGGGCGCGCGCATCATCTTCCTGGACACGGAGCGCTCCAACTGGACGTGGGACCCGGTGGCCAAGCAG TACTTCTGGCACCGCTTCTTCAGCCACCAGCCGGACCTCAACTACGACAACCCCGAAGTGCAGGAAGCCATGCTGGACGT CATGCGCTTCTGGCTCAACATGGGCGTGGACGGGTTCCGCTGCGACGCAGTGCCCTACCTCTTCGAGCGCGAAGGCACCA ACTGCGAGAACCTTCCGGAGACGCACGCCTTCCTCAAGCGCCTGCGGAAGACCATCGACTCCGAATACAAGGGGAAGATG CTGCTGGCGGAGGCGAACCAGTGGCCCGCCGACGTGCGCGTGTACTTCGGCGACGGCGACGAGTTCCACATGGGCTTCCA CTTCCCGGTGATGCCCCGCCTCTACATGGCGGTGCGCCGCGAGGACCGCACGCCCATCGTCGAAATCATGCAGCAGACGC CGGACATCCCGGACAACTGCCAGTGGGCCATCTTCCTGCGCAACCATGACGAGCTGACGCTGGAGATGGTGACGGACGAG GACCGGGACTACATGTACCGGGAATACGCCACCGACCCGCGCATGCGCATCAACCTGGGCATCCGCCGCCGGCTGGCGCC GCTGATGGACAACGGCCGCCGGCGCATCGAGCTGATGCACAGCCTGCTCTTCACCCTGCCCGGCACGCCCGTCCTCTATT ACGGCGACGAGATTGGCATGGGCGACAACATCTACCTCGGCGACCGCAACGGCGTGCGCACGCCCATGCAATGGACGGGA GACCGCAACGCGGGCTTCAGCCGCGCGGACTACGCACGCCTGTACGCGCCCGTCATCGCCGACCCGGTGTACGGTTATCA GTCCATCAACGTGGAAGCGCAGGAGCGGGTGAAGTCCAGCCTCCTGCACTGGGTGAAGCGGATGATTCGCATCCGCCAGC GCTACCCTGTCTTCTCGCTGGGGAACCTGCGCTTCCTCCAGACGGACAATCGCAAGGTGCTGGCCTTCATCCGTGAATGG GAGGGCCAGACGGTTCTGGTGGTGTGCAACCTGTCGCGCTTTGCCCAGCCCGCGGTGCTCGACATGCGCGAGTGGGAAGG CGCCGTGCCGGTGGAGCTGATTGGAGAAACCCCCTTCCCGCGGGTGAGTGAGCTGCCGTATCAGCTCTCCATGGGCCCCT TCATGTTTCTGTGGTTCCGGCTGGACAGGCCCCAGCAGGTGAGGAGCCTCGAATGA
Upstream 100 bases:
>100_bases CGCCTGACGCCCGAGCAGCCTGCGGCCCTCTGGGCCGTTCACCGGTTCCGCCGCACCGAGAACGCGTTCGACTACTACGA GTGACAACCCGAGAGGCGTA
Downstream 100 bases:
>100_bases CGACCCTCGACTTGACCAAGCTCCCTGATTACCTCAAGCACCAGCGCTGGTTCAGCGGCAAGGCCTGGCCCATCAAGCAC GTCACGGTGATGGACCACGC
Product: trehalose synthase
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MDLDPLWYKKALIYELHLRAFHDSNGDGHGDIPGLIEKLPYLQDLGINCLWLLPHYPSPLRDDGYDIADFYGVHPDYGTL ADFQRLVDEAHKRDIRVITELVVNHTSDQHPWFQEARSDPNSPKRNWYVWSDTDEQYKGARIIFLDTERSNWTWDPVAKQ YFWHRFFSHQPDLNYDNPEVQEAMLDVMRFWLNMGVDGFRCDAVPYLFEREGTNCENLPETHAFLKRLRKTIDSEYKGKM LLAEANQWPADVRVYFGDGDEFHMGFHFPVMPRLYMAVRREDRTPIVEIMQQTPDIPDNCQWAIFLRNHDELTLEMVTDE DRDYMYREYATDPRMRINLGIRRRLAPLMDNGRRRIELMHSLLFTLPGTPVLYYGDEIGMGDNIYLGDRNGVRTPMQWTG DRNAGFSRADYARLYAPVIADPVYGYQSINVEAQERVKSSLLHWVKRMIRIRQRYPVFSLGNLRFLQTDNRKVLAFIREW EGQTVLVVCNLSRFAQPAVLDMREWEGAVPVELIGETPFPRVSELPYQLSMGPFMFLWFRLDRPQQVRSLE
Sequences:
>Translated_551_residues MDLDPLWYKKALIYELHLRAFHDSNGDGHGDIPGLIEKLPYLQDLGINCLWLLPHYPSPLRDDGYDIADFYGVHPDYGTL ADFQRLVDEAHKRDIRVITELVVNHTSDQHPWFQEARSDPNSPKRNWYVWSDTDEQYKGARIIFLDTERSNWTWDPVAKQ YFWHRFFSHQPDLNYDNPEVQEAMLDVMRFWLNMGVDGFRCDAVPYLFEREGTNCENLPETHAFLKRLRKTIDSEYKGKM LLAEANQWPADVRVYFGDGDEFHMGFHFPVMPRLYMAVRREDRTPIVEIMQQTPDIPDNCQWAIFLRNHDELTLEMVTDE DRDYMYREYATDPRMRINLGIRRRLAPLMDNGRRRIELMHSLLFTLPGTPVLYYGDEIGMGDNIYLGDRNGVRTPMQWTG DRNAGFSRADYARLYAPVIADPVYGYQSINVEAQERVKSSLLHWVKRMIRIRQRYPVFSLGNLRFLQTDNRKVLAFIREW EGQTVLVVCNLSRFAQPAVLDMREWEGAVPVELIGETPFPRVSELPYQLSMGPFMFLWFRLDRPQQVRSLE >Mature_551_residues MDLDPLWYKKALIYELHLRAFHDSNGDGHGDIPGLIEKLPYLQDLGINCLWLLPHYPSPLRDDGYDIADFYGVHPDYGTL ADFQRLVDEAHKRDIRVITELVVNHTSDQHPWFQEARSDPNSPKRNWYVWSDTDEQYKGARIIFLDTERSNWTWDPVAKQ YFWHRFFSHQPDLNYDNPEVQEAMLDVMRFWLNMGVDGFRCDAVPYLFEREGTNCENLPETHAFLKRLRKTIDSEYKGKM LLAEANQWPADVRVYFGDGDEFHMGFHFPVMPRLYMAVRREDRTPIVEIMQQTPDIPDNCQWAIFLRNHDELTLEMVTDE DRDYMYREYATDPRMRINLGIRRRLAPLMDNGRRRIELMHSLLFTLPGTPVLYYGDEIGMGDNIYLGDRNGVRTPMQWTG DRNAGFSRADYARLYAPVIADPVYGYQSINVEAQERVKSSLLHWVKRMIRIRQRYPVFSLGNLRFLQTDNRKVLAFIREW EGQTVLVVCNLSRFAQPAVLDMREWEGAVPVELIGETPFPRVSELPYQLSMGPFMFLWFRLDRPQQVRSLE
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=535, Percent_Identity=28.9719626168224, Blast_Score=214, Evalue=1e-55, Organism=Escherichia coli, GI1790687, Length=554, Percent_Identity=30.5054151624549, Blast_Score=236, Evalue=4e-63, Organism=Escherichia coli, GI87081873, Length=519, Percent_Identity=24.8554913294798, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1786604, Length=476, Percent_Identity=25.2100840336134, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789995, Length=516, Percent_Identity=23.4496124031008, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32565753, Length=519, Percent_Identity=23.3140655105973, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI25147709, Length=468, Percent_Identity=23.2905982905983, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321731, Length=558, Percent_Identity=27.4193548387097, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6319776, Length=558, Percent_Identity=27.4193548387097, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6322245, Length=566, Percent_Identity=27.3851590106007, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6321726, Length=562, Percent_Identity=27.7580071174377, Blast_Score=186, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6322241, Length=207, Percent_Identity=39.6135265700483, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322021, Length=207, Percent_Identity=39.6135265700483, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6324416, Length=207, Percent_Identity=39.6135265700483, Blast_Score=168, Evalue=3e-42, Organism=Drosophila melanogaster, GI45549022, Length=576, Percent_Identity=30.2083333333333, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24583747, Length=557, Percent_Identity=30.8797127468582, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24583749, Length=557, Percent_Identity=30.8797127468582, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24583745, Length=526, Percent_Identity=31.9391634980989, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24586599, Length=544, Percent_Identity=30.3308823529412, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI24586587, Length=525, Percent_Identity=30.8571428571429, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI24586597, Length=569, Percent_Identity=30.5799648506151, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24586593, Length=549, Percent_Identity=30.6010928961749, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24586589, Length=554, Percent_Identity=30.6859205776173, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI221330053, Length=546, Percent_Identity=29.8534798534799, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI24586591, Length=224, Percent_Identity=38.8392857142857, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI281360393, Length=493, Percent_Identity=28.3975659229209, Blast_Score=160, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 65071; Mature: 65071
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLDPLWYKKALIYELHLRAFHDSNGDGHGDIPGLIEKLPYLQDLGINCLWLLPHYPSPL CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCHHHCCCCEEEEECCCCCCC RDDGYDIADFYGVHPDYGTLADFQRLVDEAHKRDIRVITELVVNHTSDQHPWFQEARSDP CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC NSPKRNWYVWSDTDEQYKGARIIFLDTERSNWTWDPVAKQYFWHRFFSHQPDLNYDNPEV CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH QEAMLDVMRFWLNMGVDGFRCDAVPYLFEREGTNCENLPETHAFLKRLRKTIDSEYKGKM HHHHHHHHHHHHHCCCCCEEECCCCHHEECCCCCCCCCCHHHHHHHHHHHHHCHHHCCCE LLAEANQWPADVRVYFGDGDEFHMGFHFPVMPRLYMAVRREDRTPIVEIMQQTPDIPDNC EEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC QWAIFLRNHDELTLEMVTDEDRDYMYREYATDPRMRINLGIRRRLAPLMDNGRRRIELMH EEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHHH SLLFTLPGTPVLYYGDEIGMGDNIYLGDRNGVRTPMQWTGDRNAGFSRADYARLYAPVIA HHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH DPVYGYQSINVEAQERVKSSLLHWVKRMIRIRQRYPVFSLGNLRFLQTDNRKVLAFIREW CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCEEEEEEHHC EGQTVLVVCNLSRFAQPAVLDMREWEGAVPVELIGETPFPRVSELPYQLSMGPFMFLWFR CCCEEEEEECCHHHCCCCCCCHHHCCCCCCEEEECCCCCCCHHCCCCEECCCCEEEEEEE LDRPQQVRSLE CCCCHHHHCCC >Mature Secondary Structure MDLDPLWYKKALIYELHLRAFHDSNGDGHGDIPGLIEKLPYLQDLGINCLWLLPHYPSPL CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHCCCHHHCCCCEEEEECCCCCCC RDDGYDIADFYGVHPDYGTLADFQRLVDEAHKRDIRVITELVVNHTSDQHPWFQEARSDP CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC NSPKRNWYVWSDTDEQYKGARIIFLDTERSNWTWDPVAKQYFWHRFFSHQPDLNYDNPEV CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH QEAMLDVMRFWLNMGVDGFRCDAVPYLFEREGTNCENLPETHAFLKRLRKTIDSEYKGKM HHHHHHHHHHHHHCCCCCEEECCCCHHEECCCCCCCCCCHHHHHHHHHHHHHCHHHCCCE LLAEANQWPADVRVYFGDGDEFHMGFHFPVMPRLYMAVRREDRTPIVEIMQQTPDIPDNC EEEECCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC QWAIFLRNHDELTLEMVTDEDRDYMYREYATDPRMRINLGIRRRLAPLMDNGRRRIELMH EEEEEEECCCCEEEEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHCCHHHHHHHH SLLFTLPGTPVLYYGDEIGMGDNIYLGDRNGVRTPMQWTGDRNAGFSRADYARLYAPVIA HHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH DPVYGYQSINVEAQERVKSSLLHWVKRMIRIRQRYPVFSLGNLRFLQTDNRKVLAFIREW CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCEEEEEEHHC EGQTVLVVCNLSRFAQPAVLDMREWEGAVPVELIGETPFPRVSELPYQLSMGPFMFLWFR CCCEEEEEECCHHHCCCCCCCHHHCCCCCCEEEECCCCCCCHHCCCCEECCCCEEEEEEE LDRPQQVRSLE CCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8645698 [H]