| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is aam1 [H]
Identifier: 108762670
GI number: 108762670
Start: 4397749
End: 4399746
Strand: Reverse
Name: aam1 [H]
Synonym: MXAN_3685
Alternate gene names: 108762670
Gene position: 4399746-4397749 (Counterclockwise)
Preceding gene: 108757450
Following gene: 108759788
Centisome position: 48.14
GC content: 67.77
Gene sequence:
>1998_bases ATGACTGAACGACTCGGAAGCGTATTCATCGAGGGAGTCAGCCCCGAGCTGGACGCTGGACGTCACGCCGTGAAGCGCGT CGTGGGAGAGCGGTGCACCGTCAAGGCCGATGTCTTCAAGGAAGGCCATGATGTCCTCGTCGCCGTCATCCGTTGGCGCC AGGTGACGCCCAGGGCGCAGCAGACCGACTGGGAGGAAGTGCCCATGCGCTTCCTCGGCAATGACCGGTGGGAAGGCGAA TTCCCCCTGACGCGGAACGGCCGCTACGAGTACACGATTGAGGCCTGGCCAGACCTCTTCCGGACCTGGACGTCCGAGCT GAAGCGCAAGGTCGACGCGGGCCGGGACGTGCGCAGCGAGTTGCTGGAAGGCGCCGCCCTGCTGGAAGGCGCCGTCGCCC GTGCCCGTACGGCGAAGCAGCCGGACGACGCGCGGGTGCTGGGCGAAGCGGCCGTCCGGCTGCGACAGCCCCCCTCCCCT GACCTCCTCGCCGTGGCCCTGGCACCCGAGCTGGCCGACGTGGCCTCGACCCATCCGGACCGTTCACTGGCCCGCCGCTA CGACAAGGTGTTGGAGGTCTTCGCGGACCGGGAGAAGGCCCGCTTCAGCGCGTGGTACGAATTCTTCCCGCGTTCGGCGA AGCGCGACGGCGTCACCCACGCCACCTTCCGGGACGCGGAAGGCTGGCTGCCGTACATCCAGCAGCTCGGCTTCGACACC GTCTACCTCCCGCCCATCCACCCCATTGGCCGCACGGCGCGCAAGGGCAAGAACAACAGCCTCGCCGCGGCGGCCGACGA CGTGGGCAGCCCCTGGGCCATTGGTGCCTCGGAAGGCGGCCACAAGGCCGTGCACCCGAAGCTGGGGACGCTGGAGGACT TCCGGCACTTCGTGGAGACGGCGCAGGCTCACGGCATCGAGGTGGCGCTGGACCTGGCCTTCCAGTGCTCGCCGGACCAC CCGTACGTGAAGGAACATCCGGAGTGGTTCCAGCACCGGCCGGACGGCACCATCAAGACGGCGGAGAACCCGCCCAAGCG CTACGAGGACATCGTCAACTTCGACTGGATGGGCCCCGCCCGTGAGTCGCTCTGGGCGGAGCTGGAATCCGTCGTCCTCC ACTGGGTGAAGCAAGGGGTGAACACGTTCCGCGTGGACAACCCGCACACCAAGCCCACGCAATTCTGGGCCTGGCTCATC CGCCGCGTGCAGGAAGCCCATCCGCAGGTCCTCTTCCTGTCCGAGGCCTTCACCCGTCCCAAGGTGATGAAGGCCCTGGG CAAGGTGGGCTTCACCCAGTCGTACACCTACTTCACCTGGCGCAACTTCAAGGGCGAGCTCCAGGAGTACCTGGAGGAGA TCACCCAGCCGCCGGTGTCCGACTACTTCCGCGGCAACCTCTGGCCCAATACGCCGGACATCCTCCCGGAGTTCCTCCAG AACGCGGGGCCCGGTGCCTTCCGTCTGCGCGCGGCGCTGGCCGGCACGCTTTCCTCCGTGTGGGGCATGTACTGCGGCTA CGAGCTGTGCGAGGGCCGCCCCATCCCGGGCAAGGAGGAGTACACCGATTCGGAGAAGTACCAACTGGTCGCGTGGGACC TGGACCGGCCCGGCAACATCCGGGATTGGATTGCGCGCCTCAACGCCGCGCGCCGCACGCACCCCGCGCTGCATCAGTAC GGGACGCTGCGCTTCTTCTCGTCGAACAACGACCGAGTCCTCTTCTACGGCAAGCGCACGCCAGACGGCGGCAGCCTGGT GCTGATGGCGGTGAGCCTGGATCCGTATGCCGCCCAGGAGGCGCTGCTGCACGTGCCACTCGAGTGGCTGGGCGCGCGCC CTGACGAGACGTATCAGGTGCACGAGCTGATGTCGGACCAGCGCTCGCTATGGCAGGGTCCGGACGTGCAGGTGCGCCTG ACGCCCGAGCAGCCTGCGGCCCTCTGGGCCGTTCACCGGTTCCGCCGCACCGAGAACGCGTTCGACTACTACGAGTGA
Upstream 100 bases:
>100_bases GAGCCAACGCGGCTGGCACGGAAGGCGTCCAGCATCGACAACAGCCGCGATTCGCCGCGAGGCAATCACAACCCAAGACC TATAAGGGCCGCCAGCCACC
Downstream 100 bases:
>100_bases CAACCCGAGAGGCGTAATGGACCTGGATCCCCTCTGGTACAAGAAAGCCCTTATCTACGAGCTGCACCTGCGTGCCTTCC ATGACTCCAATGGCGACGGC
Product: hypothetical protein
Products: D-Glucose 6-phosphate; D-Glucose [C]
Alternate protein names: NA
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MTERLGSVFIEGVSPELDAGRHAVKRVVGERCTVKADVFKEGHDVLVAVIRWRQVTPRAQQTDWEEVPMRFLGNDRWEGE FPLTRNGRYEYTIEAWPDLFRTWTSELKRKVDAGRDVRSELLEGAALLEGAVARARTAKQPDDARVLGEAAVRLRQPPSP DLLAVALAPELADVASTHPDRSLARRYDKVLEVFADREKARFSAWYEFFPRSAKRDGVTHATFRDAEGWLPYIQQLGFDT VYLPPIHPIGRTARKGKNNSLAAAADDVGSPWAIGASEGGHKAVHPKLGTLEDFRHFVETAQAHGIEVALDLAFQCSPDH PYVKEHPEWFQHRPDGTIKTAENPPKRYEDIVNFDWMGPARESLWAELESVVLHWVKQGVNTFRVDNPHTKPTQFWAWLI RRVQEAHPQVLFLSEAFTRPKVMKALGKVGFTQSYTYFTWRNFKGELQEYLEEITQPPVSDYFRGNLWPNTPDILPEFLQ NAGPGAFRLRAALAGTLSSVWGMYCGYELCEGRPIPGKEEYTDSEKYQLVAWDLDRPGNIRDWIARLNAARRTHPALHQY GTLRFFSSNNDRVLFYGKRTPDGGSLVLMAVSLDPYAAQEALLHVPLEWLGARPDETYQVHELMSDQRSLWQGPDVQVRL TPEQPAALWAVHRFRRTENAFDYYE
Sequences:
>Translated_665_residues MTERLGSVFIEGVSPELDAGRHAVKRVVGERCTVKADVFKEGHDVLVAVIRWRQVTPRAQQTDWEEVPMRFLGNDRWEGE FPLTRNGRYEYTIEAWPDLFRTWTSELKRKVDAGRDVRSELLEGAALLEGAVARARTAKQPDDARVLGEAAVRLRQPPSP DLLAVALAPELADVASTHPDRSLARRYDKVLEVFADREKARFSAWYEFFPRSAKRDGVTHATFRDAEGWLPYIQQLGFDT VYLPPIHPIGRTARKGKNNSLAAAADDVGSPWAIGASEGGHKAVHPKLGTLEDFRHFVETAQAHGIEVALDLAFQCSPDH PYVKEHPEWFQHRPDGTIKTAENPPKRYEDIVNFDWMGPARESLWAELESVVLHWVKQGVNTFRVDNPHTKPTQFWAWLI RRVQEAHPQVLFLSEAFTRPKVMKALGKVGFTQSYTYFTWRNFKGELQEYLEEITQPPVSDYFRGNLWPNTPDILPEFLQ NAGPGAFRLRAALAGTLSSVWGMYCGYELCEGRPIPGKEEYTDSEKYQLVAWDLDRPGNIRDWIARLNAARRTHPALHQY GTLRFFSSNNDRVLFYGKRTPDGGSLVLMAVSLDPYAAQEALLHVPLEWLGARPDETYQVHELMSDQRSLWQGPDVQVRL TPEQPAALWAVHRFRRTENAFDYYE >Mature_664_residues TERLGSVFIEGVSPELDAGRHAVKRVVGERCTVKADVFKEGHDVLVAVIRWRQVTPRAQQTDWEEVPMRFLGNDRWEGEF PLTRNGRYEYTIEAWPDLFRTWTSELKRKVDAGRDVRSELLEGAALLEGAVARARTAKQPDDARVLGEAAVRLRQPPSPD LLAVALAPELADVASTHPDRSLARRYDKVLEVFADREKARFSAWYEFFPRSAKRDGVTHATFRDAEGWLPYIQQLGFDTV YLPPIHPIGRTARKGKNNSLAAAADDVGSPWAIGASEGGHKAVHPKLGTLEDFRHFVETAQAHGIEVALDLAFQCSPDHP YVKEHPEWFQHRPDGTIKTAENPPKRYEDIVNFDWMGPARESLWAELESVVLHWVKQGVNTFRVDNPHTKPTQFWAWLIR RVQEAHPQVLFLSEAFTRPKVMKALGKVGFTQSYTYFTWRNFKGELQEYLEEITQPPVSDYFRGNLWPNTPDILPEFLQN AGPGAFRLRAALAGTLSSVWGMYCGYELCEGRPIPGKEEYTDSEKYQLVAWDLDRPGNIRDWIARLNAARRTHPALHQYG TLRFFSSNNDRVLFYGKRTPDGGSLVLMAVSLDPYAAQEALLHVPLEWLGARPDETYQVHELMSDQRSLWQGPDVQVRLT PEQPAALWAVHRFRRTENAFDYYE
Specific function: Unknown
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021828 - InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]
EC number: 3.2.1.93 [C]
Molecular weight: Translated: 75924; Mature: 75793
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERLGSVFIEGVSPELDAGRHAVKRVVGERCTVKADVFKEGHDVLVAVIRWRQVTPRAQ CCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHCCCCCC QTDWEEVPMRFLGNDRWEGEFPLTRNGRYEYTIEAWPDLFRTWTSELKRKVDAGRDVRSE CCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLEGAALLEGAVARARTAKQPDDARVLGEAAVRLRQPPSPDLLAVALAPELADVASTHPD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCC RSLARRYDKVLEVFADREKARFSAWYEFFPRSAKRDGVTHATFRDAEGWLPYIQQLGFDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCE VYLPPIHPIGRTARKGKNNSLAAAADDVGSPWAIGASEGGHKAVHPKLGTLEDFRHFVET EECCCCCCCCHHHHCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH AQAHGIEVALDLAFQCSPDHPYVKEHPEWFQHRPDGTIKTAENPPKRYEDIVNFDWMGPA HHHCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCCCCEECCCCCHHHHHHHCCCCCCCHH RESLWAELESVVLHWVKQGVNTFRVDNPHTKPTQFWAWLIRRVQEAHPQVLFLSEAFTRP HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCH KVMKALGKVGFTQSYTYFTWRNFKGELQEYLEEITQPPVSDYFRGNLWPNTPDILPEFLQ HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHH NAGPGAFRLRAALAGTLSSVWGMYCGYELCEGRPIPGKEEYTDSEKYQLVAWDLDRPGNI CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCH RDWIARLNAARRTHPALHQYGTLRFFSSNNDRVLFYGKRTPDGGSLVLMAVSLDPYAAQE HHHHHHHHHHHHCCHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCHHHHH ALLHVPLEWLGARPDETYQVHELMSDQRSLWQGPDVQVRLTPEQPAALWAVHRFRRTENA HHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCC FDYYE CCCCC >Mature Secondary Structure TERLGSVFIEGVSPELDAGRHAVKRVVGERCTVKADVFKEGHDVLVAVIRWRQVTPRAQ CCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHCCHHHHHHHHHHHHCCCCCC QTDWEEVPMRFLGNDRWEGEFPLTRNGRYEYTIEAWPDLFRTWTSELKRKVDAGRDVRSE CCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLEGAALLEGAVARARTAKQPDDARVLGEAAVRLRQPPSPDLLAVALAPELADVASTHPD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCCC RSLARRYDKVLEVFADREKARFSAWYEFFPRSAKRDGVTHATFRDAEGWLPYIQQLGFDT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHCCCCE VYLPPIHPIGRTARKGKNNSLAAAADDVGSPWAIGASEGGHKAVHPKLGTLEDFRHFVET EECCCCCCCCHHHHCCCCCCCEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH AQAHGIEVALDLAFQCSPDHPYVKEHPEWFQHRPDGTIKTAENPPKRYEDIVNFDWMGPA HHHCCEEEEEEEEEEECCCCCCCCCCCHHHHCCCCCCEECCCCCHHHHHHHCCCCCCCHH RESLWAELESVVLHWVKQGVNTFRVDNPHTKPTQFWAWLIRRVQEAHPQVLFLSEAFTRP HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHCCH KVMKALGKVGFTQSYTYFTWRNFKGELQEYLEEITQPPVSDYFRGNLWPNTPDILPEFLQ HHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHH NAGPGAFRLRAALAGTLSSVWGMYCGYELCEGRPIPGKEEYTDSEKYQLVAWDLDRPGNI CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCH RDWIARLNAARRTHPALHQYGTLRFFSSNNDRVLFYGKRTPDGGSLVLMAVSLDPYAAQE HHHHHHHHHHHHCCHHHHHCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECCCHHHHH ALLHVPLEWLGARPDETYQVHELMSDQRSLWQGPDVQVRLTPEQPAALWAVHRFRRTENA HHHHCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCC FDYYE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: H2O; alpha,alpha'-Trehalose 6-phosphate [C]
Specific reaction: H2O + alpha,alpha'-Trehalose 6-phosphate --> D-Glucose 6-phosphate + D-Glucose [C]
General reaction: O-Glycosyl bond hydrolysis [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10970853 [H]