| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hemK [H]
Identifier: 108759552
GI number: 108759552
Start: 6141434
End: 6142315
Strand: Direct
Name: hemK [H]
Synonym: MXAN_4908
Alternate gene names: 108759552
Gene position: 6141434-6142315 (Clockwise)
Preceding gene: 108759492
Following gene: 108761915
Centisome position: 67.19
GC content: 71.77
Gene sequence:
>882_bases ATGAGCAGCGAGCCCTGGACCATCCGCAGGGTCCTCACCTGGACGACGCAGCACTTCGAGAAGCGACAGGTGGATGCGCC GCGGCTCACCGCGGAAATCCTCCTGTCGCACGTGCTCAAGCTCAGCCGCGTCCGGCTGTACGTGGACCTGGACCGCCCGC TCTCCAAGGACGAGCTGGGCGCCTACCGTGCCCTCATCGAGCGGCGCATGGCGGGCGAGCCCACGCAGTACCTGACGGGG GTGCGTGAGTTCTACAACCGCCCCTTCAAGGTGGACGCCCGGGTGCTGATTCCGCGCCCGGAGACGGAGCTGTTGGTGGA GGCGGCGCTGCGCATGCTTCCCAAGGACGCGCCCGGCCGCGCGCTGGACGTGTGCACCGGCTCCGGCTGCATCGCCATCA GCCTCGCGGCCGAGCGGCCACAGGCCACCGTCATCGCCACCGACCTGTCTCCGGACGCCTGCGCGCTGGCGCGGGAGAAC GCCCAGGCGCTGGGCGTGGCGGACCGGGTGACGGTGCTGCAGGGCGACCTCTTCACCCCGGTGCCCGCGGGCGAGCGCTT CCAGGTGGTGGTCTCCAACCCGCCGTACATCGCCTCCGGGGAGATTCCCGGCCTGTCCGCCGAGGTGCGACGCGAGCCGA CGCTGGCGCTCGACGGCGGGCCGGACGGGCTGGTGGCGGTGCGCCGAGTGGTGACGGGTGCGCGCCAGTGGTTGGAGCCT GGCGGCCTCCTTGCATTGGAGATTGGCGAGGACCAGGGCCCCGCCGTCCTGGAGCTCCTGCGTGCCGCGGGTTACGCGGA CGCGCGGGTGGAGAAGGACCTGGAGCGGCGGGAACGGATGGCATTTGGGACACAGCCCGTGGCCAGCGAGCCACAGGGCT GA
Upstream 100 bases:
>100_bases TCATGGCCGGTGACGTGGAAGACGTCATCACCGCCTGCCGGACCTTCTACCAGGCCGAAGCGCTCAAGGCGCAGACGGCC GGCGGCCCGAAGCCCTCCGC
Downstream 100 bases:
>100_bases AGACGCAGGGAACCATGGACAAGATCGTCATCAAGGGCGGCCAGGCGCTGCACGGCGAAGTGCAGGCCTCGGGCGCGAAG AACGCGGCGCTGCCCATCCT
Product: putative protein methyltransferase HemK
Products: NA
Alternate protein names: HemK protein homolog; tRNA (guanine-N(7)-)-methyltransferase; tRNA(m7G46)-methyltransferase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSSEPWTIRRVLTWTTQHFEKRQVDAPRLTAEILLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTG VREFYNRPFKVDARVLIPRPETELLVEAALRMLPKDAPGRALDVCTGSGCIAISLAAERPQATVIATDLSPDACALAREN AQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAEVRREPTLALDGGPDGLVAVRRVVTGARQWLEP GGLLALEIGEDQGPAVLELLRAAGYADARVEKDLERRERMAFGTQPVASEPQG
Sequences:
>Translated_293_residues MSSEPWTIRRVLTWTTQHFEKRQVDAPRLTAEILLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTG VREFYNRPFKVDARVLIPRPETELLVEAALRMLPKDAPGRALDVCTGSGCIAISLAAERPQATVIATDLSPDACALAREN AQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAEVRREPTLALDGGPDGLVAVRRVVTGARQWLEP GGLLALEIGEDQGPAVLELLRAAGYADARVEKDLERRERMAFGTQPVASEPQG >Mature_292_residues SSEPWTIRRVLTWTTQHFEKRQVDAPRLTAEILLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGV REFYNRPFKVDARVLIPRPETELLVEAALRMLPKDAPGRALDVCTGSGCIAISLAAERPQATVIATDLSPDACALARENA QALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAEVRREPTLALDGGPDGLVAVRRVVTGARQWLEPG GLLALEIGEDQGPAVLELLRAAGYADARVEKDLERRERMAFGTQPVASEPQG
Specific function: Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the methyltransferase superfamily. TrmB family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=256, Percent_Identity=34.765625, Blast_Score=111, Evalue=9e-25, Organism=Escherichia coli, GI1787463, Length=259, Percent_Identity=41.6988416988417, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI87082085, Length=262, Percent_Identity=33.587786259542, Blast_Score=130, Evalue=7e-32, Organism=Drosophila melanogaster, GI24582226, Length=260, Percent_Identity=31.9230769230769, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 - InterPro: IPR003358 [H]
Pfam domain/function: PF02390 Methyltransf_4; PF05175 MTS [H]
EC number: =2.1.1.33 [H]
Molecular weight: Translated: 32019; Mature: 31888
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEPWTIRRVLTWTTQHFEKRQVDAPRLTAEILLSHVLKLSRVRLYVDLDRPLSKDELG CCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHH AYRALIERRMAGEPTQYLTGVREFYNRPFKVDARVLIPRPETELLVEAALRMLPKDAPGR HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCEEEECCCCHHHHHHHHHHHCCCCCCCC ALDVCTGSGCIAISLAAERPQATVIATDLSPDACALARENAQALGVADRVTVLQGDLFTP EEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHCCHHHHCHHHHEEEEECCCCCC VPAGERFQVVVSNPPYIASGEIPGLSAEVRREPTLALDGGPDGLVAVRRVVTGARQWLEP CCCCCEEEEEECCCCEEECCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC GGLLALEIGEDQGPAVLELLRAAGYADARVEKDLERRERMAFGTQPVASEPQG CCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SSEPWTIRRVLTWTTQHFEKRQVDAPRLTAEILLSHVLKLSRVRLYVDLDRPLSKDELG CCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHH AYRALIERRMAGEPTQYLTGVREFYNRPFKVDARVLIPRPETELLVEAALRMLPKDAPGR HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCEEEECCCCHHHHHHHHHHHCCCCCCCC ALDVCTGSGCIAISLAAERPQATVIATDLSPDACALARENAQALGVADRVTVLQGDLFTP EEEEECCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHCCHHHHCHHHHEEEEECCCCCC VPAGERFQVVVSNPPYIASGEIPGLSAEVRREPTLALDGGPDGLVAVRRVVTGARQWLEP CCCCCEEEEEECCCCEEECCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC GGLLALEIGEDQGPAVLELLRAAGYADARVEKDLERRERMAFGTQPVASEPQG CCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA