| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759150
Identifier: 108759150
GI number: 108759150
Start: 6111599
End: 6112402
Strand: Direct
Name: 108759150
Synonym: MXAN_4879
Alternate gene names: NA
Gene position: 6111599-6112402 (Clockwise)
Preceding gene: 108761789
Following gene: 108760251
Centisome position: 66.87
GC content: 67.91
Gene sequence:
>804_bases ATGCGCACCGCCCTGGCGATTGCCCGCAAGGAACTGTCCATCTACTTCACCACGCCGTGGGCCTACGCCGTCTTCACGGC GATGGCGGCGCTGACGGCCTTCTACTTCATGGACCTGCTGCAGGCGTTCAACGACGTCCAGGGCGTGGCGCGCCGGGTGG GCTGGGCGCAGATGTCCCCGGACTTCAACATGTACCGCAACCTCACGGACGGGGTGGTGGTGGAGCTGTGGGGCAGCGTC CTGGTCATCACCCTGGTCGTCACGCCGTTCCTGTCCATGCGGCTGTTCGCGGAGGAGAAGCGCAACCGCACCTTCGAGCT GCTGATGACGGCCCCGGTGCGGCCCATTGAAATCGTGCTGGGCAAGTACCTGGGCGGCCTGGGCGTCATCTCCGCCACGC TGGCGCTCACGCTCGTCTTCCCGCTACTGCTGTCCGTGCTGGGCCACAGCGAGTCCGGGCTGGCGCTGGAGTGGTCCACC GTCCTGCTGGGCTACGGCGCGCTGCTGCTGTGGGGCGCCACCTGCATGGCCGTGGGCCTGTTCATCTCCGCGCTGACGGA GAGCCAGATGCTGGCGGCCTTCCTCACCTTCTGTGTCCTGCTGGCGTGGATGCTGCTGGGCCAGGTGGCCCGCCGCGCGG AGGAGCCGCTGCGCTCCGCGCTGTCCTACGTCGCCTGCGACCTCCAGTTGCAGGGGATGATCAAGGGCGTGCTGGACGCG CAGTCGCTGGTGTTCTTCGCCTCCGTCATCGGCTTCTCGCTCTTCCTCACCCACCGCACGGTGGATGCGCAGCGGTGGGC CTGA
Upstream 100 bases:
>100_bases GCCCGCATCCACGGGCAGGCGGAGAACGCGTCGCTGGAAGAAGTCTTCATCAAGCTGACCGCCGCCTGAGCGCGGCCCCC TTTTCGAGGACCCCGCCTCC
Downstream 100 bases:
>100_bases CATGAAGGCGGCTCATGTCGGCAAGGTCCTGGGCGCGTTCGGACTGCTGCTGTTGCTGTCGAGTCCGTTCACCCTGTTCA TCACCTCGGACAGCGCCGTC
Product: putative ABC transporter permease
Products: NA
Alternate protein names: ABC-2 Type Transporter; ABC-2 Type Transport System Permease Protein; ABC Transporter Permease; Abc Transporter Permease Protein; ABC Transporter Inner Membrane Protein; ABC-2 Type Transport System Permease; Gliding Motility Protein GldF; ABC Transporter; ABC-Type Transport System Permease Protein; ABC-Type Transport System Permease; Multi-Copper Maturation ABC Transporter Permease; CcmB Protein; Membrane Spanning Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRTALAIARKELSIYFTTPWAYAVFTAMAALTAFYFMDLLQAFNDVQGVARRVGWAQMSPDFNMYRNLTDGVVVELWGSV LVITLVVTPFLSMRLFAEEKRNRTFELLMTAPVRPIEIVLGKYLGGLGVISATLALTLVFPLLLSVLGHSESGLALEWST VLLGYGALLLWGATCMAVGLFISALTESQMLAAFLTFCVLLAWMLLGQVARRAEEPLRSALSYVACDLQLQGMIKGVLDA QSLVFFASVIGFSLFLTHRTVDAQRWA
Sequences:
>Translated_267_residues MRTALAIARKELSIYFTTPWAYAVFTAMAALTAFYFMDLLQAFNDVQGVARRVGWAQMSPDFNMYRNLTDGVVVELWGSV LVITLVVTPFLSMRLFAEEKRNRTFELLMTAPVRPIEIVLGKYLGGLGVISATLALTLVFPLLLSVLGHSESGLALEWST VLLGYGALLLWGATCMAVGLFISALTESQMLAAFLTFCVLLAWMLLGQVARRAEEPLRSALSYVACDLQLQGMIKGVLDA QSLVFFASVIGFSLFLTHRTVDAQRWA >Mature_267_residues MRTALAIARKELSIYFTTPWAYAVFTAMAALTAFYFMDLLQAFNDVQGVARRVGWAQMSPDFNMYRNLTDGVVVELWGSV LVITLVVTPFLSMRLFAEEKRNRTFELLMTAPVRPIEIVLGKYLGGLGVISATLALTLVFPLLLSVLGHSESGLALEWST VLLGYGALLLWGATCMAVGLFISALTESQMLAAFLTFCVLLAWMLLGQVARRAEEPLRSALSYVACDLQLQGMIKGVLDA QSLVFFASVIGFSLFLTHRTVDAQRWA
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29424; Mature: 29424
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTALAIARKELSIYFTTPWAYAVFTAMAALTAFYFMDLLQAFNDVQGVARRVGWAQMSP CCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC DFNMYRNLTDGVVVELWGSVLVITLVVTPFLSMRLFAEEKRNRTFELLMTAPVRPIEIVL CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH GKYLGGLGVISATLALTLVFPLLLSVLGHSESGLALEWSTVLLGYGALLLWGATCMAVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH FISALTESQMLAAFLTFCVLLAWMLLGQVARRAEEPLRSALSYVACDLQLQGMIKGVLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSLVFFASVIGFSLFLTHRTVDAQRWA HHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure MRTALAIARKELSIYFTTPWAYAVFTAMAALTAFYFMDLLQAFNDVQGVARRVGWAQMSP CCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCC DFNMYRNLTDGVVVELWGSVLVITLVVTPFLSMRLFAEEKRNRTFELLMTAPVRPIEIVL CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH GKYLGGLGVISATLALTLVFPLLLSVLGHSESGLALEWSTVLLGYGALLLWGATCMAVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH FISALTESQMLAAFLTFCVLLAWMLLGQVARRAEEPLRSALSYVACDLQLQGMIKGVLDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSLVFFASVIGFSLFLTHRTVDAQRWA HHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA