| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760251
Identifier: 108760251
GI number: 108760251
Start: 6112404
End: 6113975
Strand: Direct
Name: 108760251
Synonym: MXAN_4880
Alternate gene names: NA
Gene position: 6112404-6113975 (Clockwise)
Preceding gene: 108759150
Following gene: 108760149
Centisome position: 66.88
GC content: 67.81
Gene sequence:
>1572_bases ATGAAGGCGGCTCATGTCGGCAAGGTCCTGGGCGCGTTCGGACTGCTGCTGTTGCTGTCGAGTCCGTTCACCCTGTTCAT CACCTCGGACAGCGCCGTCACCGCCGCCGTGAAGGCGGGCGCGGGGCTGGTGCTGGTGGGCATCTACGGCGCGACGAACT ACCGGCAGTTCGGCCAGTTCGCCACCCGCCGCTCCAGCAGCTTCTTCGCCACCACGGTGCTCACCACGCTGGGCGTGTTC GCCGCGCTGGTGGCGGTGAACTACCTGGCCTTCAAGCAGAACCGGCGCTGGGATTTGACGCAGGCACGCATCCACACGCT GGCGCCGCAGACGGTGTCCACGTTGGCCGCCATTCCCGACCAGGTGCGCGCCATCGCGTTCATCACCCCGGCGCATGCCC AGTACGGCCAGTTGGAAGCGCTCTTCGCGCTCTACCATGCCGAAGCGCCGGGGAAGTTCGAGTACACCTTCAAGGACCCG CGCCGAAGCCCGGACCTGGCCGCGAAGTACCAGGTGCGTGAGGGCCAGACGGCGGTGGTGCTGGTACGCGGCGAGGGCGA GTACGCCACGCACACGCTGCTCGCCACCGTGTCCGAGCAGGAGCTGACACACGCGGTCCTCAAGCTGAACGCGGTGGGCA CCCAGAAGGTCTATTTCGTCACCGGCCACGGGGAGTGGCCACTGGACAAGGAGCAGGCGCCGCCCCAGGACCCGGGCGCC AGCCTGTCCGAATTCCGGAGGCAGTTGCTCCAGGAGGGCTACACCGCGGAACCGCTGAACCTCGCGGGTGTCCAAGACGT GCCACGGGACGCCGCGCTGGTCATCATCGCGGGGGCCCGGGGGCCCTACACCGCGCCGGAGAAGGAGCTGCTCCAGCGCT ATCTCGCCTCCGGAGGACGCATGCTCTACTTCGCTGACGCCGGCCTCCGTGATGGCCTGGACGGACTGCTGGCGGAGCAC GGCGTGCAGGTGGATGAGGGCATCGTCGCGGACGCGCAGTACAACAGCGGCAATCCCTTCGTGGTGCTGTCGCTCTTCTA CAGCGACCACGAGATTGGCAAGCCGCTGCACCAGCGGGGACTCAACGTGGAGTTCCCCACCCCACGCAGCCTGACCCTGC TGCGCATGGGGATGGCGCCGGGCGTCCAGGTGCAGCCGGTGGTCCTCACGTCCCAGTACGGATGGGTGGAGAGCACGCCA GAGGAGAACGCGGTGCCTTCGGATGGCGAGAAGACGGGCCAGTTGGTGCTGGTGGCCGCCGTGACGCGTGATACCCAGGC CTCGCCGGGCAAGCGCTTTGATGAAGCGCGCCTGGTGGTGATGGGAGACTCGGAGCTCCTCCTGGACCCGAACTGGGGCC ATGAGCCCAACCGCAACCTGGTGATGAACGCGCTGGGCTGGGCGTCCAACCAGCTCACGAAAATCACCATCCGCCCGCCG GACCGCGAGGTGTCCACGCTGGAGCTGGACGCGGCGACGCTCAGCCGCATCCGATTCTTCGCCACGGACCTCATGCCGCT GACGCTGCTGGGCGTGGGCCTGGCCATCTGGCTGTCGAGGCGCAACAAGTGA
Upstream 100 bases:
>100_bases GGCGTGCTGGACGCGCAGTCGCTGGTGTTCTTCGCCTCCGTCATCGGCTTCTCGCTCTTCCTCACCCACCGCACGGTGGA TGCGCAGCGGTGGGCCTGAC
Downstream 100 bases:
>100_bases TGCCGGCCCGCGGACGGTGGCGGTGGAACATCCTCACCGTCGTCACGGTGGGCCTGGGGCTCACCGCATGCACCGGTGAG AAGGCGTCCGAAGCGAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MKAAHVGKVLGAFGLLLLLSSPFTLFITSDSAVTAAVKAGAGLVLVGIYGATNYRQFGQFATRRSSSFFATTVLTTLGVF AALVAVNYLAFKQNRRWDLTQARIHTLAPQTVSTLAAIPDQVRAIAFITPAHAQYGQLEALFALYHAEAPGKFEYTFKDP RRSPDLAAKYQVREGQTAVVLVRGEGEYATHTLLATVSEQELTHAVLKLNAVGTQKVYFVTGHGEWPLDKEQAPPQDPGA SLSEFRRQLLQEGYTAEPLNLAGVQDVPRDAALVIIAGARGPYTAPEKELLQRYLASGGRMLYFADAGLRDGLDGLLAEH GVQVDEGIVADAQYNSGNPFVVLSLFYSDHEIGKPLHQRGLNVEFPTPRSLTLLRMGMAPGVQVQPVVLTSQYGWVESTP EENAVPSDGEKTGQLVLVAAVTRDTQASPGKRFDEARLVVMGDSELLLDPNWGHEPNRNLVMNALGWASNQLTKITIRPP DREVSTLELDAATLSRIRFFATDLMPLTLLGVGLAIWLSRRNK
Sequences:
>Translated_523_residues MKAAHVGKVLGAFGLLLLLSSPFTLFITSDSAVTAAVKAGAGLVLVGIYGATNYRQFGQFATRRSSSFFATTVLTTLGVF AALVAVNYLAFKQNRRWDLTQARIHTLAPQTVSTLAAIPDQVRAIAFITPAHAQYGQLEALFALYHAEAPGKFEYTFKDP RRSPDLAAKYQVREGQTAVVLVRGEGEYATHTLLATVSEQELTHAVLKLNAVGTQKVYFVTGHGEWPLDKEQAPPQDPGA SLSEFRRQLLQEGYTAEPLNLAGVQDVPRDAALVIIAGARGPYTAPEKELLQRYLASGGRMLYFADAGLRDGLDGLLAEH GVQVDEGIVADAQYNSGNPFVVLSLFYSDHEIGKPLHQRGLNVEFPTPRSLTLLRMGMAPGVQVQPVVLTSQYGWVESTP EENAVPSDGEKTGQLVLVAAVTRDTQASPGKRFDEARLVVMGDSELLLDPNWGHEPNRNLVMNALGWASNQLTKITIRPP DREVSTLELDAATLSRIRFFATDLMPLTLLGVGLAIWLSRRNK >Mature_523_residues MKAAHVGKVLGAFGLLLLLSSPFTLFITSDSAVTAAVKAGAGLVLVGIYGATNYRQFGQFATRRSSSFFATTVLTTLGVF AALVAVNYLAFKQNRRWDLTQARIHTLAPQTVSTLAAIPDQVRAIAFITPAHAQYGQLEALFALYHAEAPGKFEYTFKDP RRSPDLAAKYQVREGQTAVVLVRGEGEYATHTLLATVSEQELTHAVLKLNAVGTQKVYFVTGHGEWPLDKEQAPPQDPGA SLSEFRRQLLQEGYTAEPLNLAGVQDVPRDAALVIIAGARGPYTAPEKELLQRYLASGGRMLYFADAGLRDGLDGLLAEH GVQVDEGIVADAQYNSGNPFVVLSLFYSDHEIGKPLHQRGLNVEFPTPRSLTLLRMGMAPGVQVQPVVLTSQYGWVESTP EENAVPSDGEKTGQLVLVAAVTRDTQASPGKRFDEARLVVMGDSELLLDPNWGHEPNRNLVMNALGWASNQLTKITIRPP DREVSTLELDAATLSRIRFFATDLMPLTLLGVGLAIWLSRRNK
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56876; Mature: 56876
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAHVGKVLGAFGLLLLLSSPFTLFITSDSAVTAAVKAGAGLVLVGIYGATNYRQFGQF CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHCCCCEEEEEEECCCCHHHHHHH ATRRSSSFFATTVLTTLGVFAALVAVNYLAFKQNRRWDLTQARIHTLAPQTVSTLAAIPD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCH QVRAIAFITPAHAQYGQLEALFALYHAEAPGKFEYTFKDPRRSPDLAAKYQVREGQTAVV HHEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEE LVRGEGEYATHTLLATVSEQELTHAVLKLNAVGTQKVYFVTGHGEWPLDKEQAPPQDPGA EEECCCCCCCEEEEEEHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC SLSEFRRQLLQEGYTAEPLNLAGVQDVPRDAALVIIAGARGPYTAPEKELLQRYLASGGR CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCC MLYFADAGLRDGLDGLLAEHGVQVDEGIVADAQYNSGNPFVVLSLFYSDHEIGKPLHQRG EEEEECCCCCCCHHHHHHHCCCCCCCCEEEECEECCCCCEEEEEEEECCCCCCCHHHHCC LNVEFPTPRSLTLLRMGMAPGVQVQPVVLTSQYGWVESTPEENAVPSDGEKTGQLVLVAA CCEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE VTRDTQASPGKRFDEARLVVMGDSELLLDPNWGHEPNRNLVMNALGWASNQLTKITIRPP EECCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC DREVSTLELDAATLSRIRFFATDLMPLTLLGVGLAIWLSRRNK CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKAAHVGKVLGAFGLLLLLSSPFTLFITSDSAVTAAVKAGAGLVLVGIYGATNYRQFGQF CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHCCCCEEEEEEECCCCHHHHHHH ATRRSSSFFATTVLTTLGVFAALVAVNYLAFKQNRRWDLTQARIHTLAPQTVSTLAAIPD HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCH QVRAIAFITPAHAQYGQLEALFALYHAEAPGKFEYTFKDPRRSPDLAAKYQVREGQTAVV HHEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEE LVRGEGEYATHTLLATVSEQELTHAVLKLNAVGTQKVYFVTGHGEWPLDKEQAPPQDPGA EEECCCCCCCEEEEEEHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCC SLSEFRRQLLQEGYTAEPLNLAGVQDVPRDAALVIIAGARGPYTAPEKELLQRYLASGGR CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCC MLYFADAGLRDGLDGLLAEHGVQVDEGIVADAQYNSGNPFVVLSLFYSDHEIGKPLHQRG EEEEECCCCCCCHHHHHHHCCCCCCCCEEEECEECCCCCEEEEEEEECCCCCCCHHHHCC LNVEFPTPRSLTLLRMGMAPGVQVQPVVLTSQYGWVESTPEENAVPSDGEKTGQLVLVAA CCEECCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEE VTRDTQASPGKRFDEARLVVMGDSELLLDPNWGHEPNRNLVMNALGWASNQLTKITIRPP EECCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCC DREVSTLELDAATLSRIRFFATDLMPLTLLGVGLAIWLSRRNK CCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA