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The map label for this gene is 108759104

Identifier: 108759104

GI number: 108759104

Start: 4131024

End: 4131308

Strand: Direct

Name: 108759104

Synonym: MXAN_3546

Alternate gene names: NA

Gene position: 4131024-4131308 (Clockwise)

Preceding gene: 108759661

Following gene: 108760176

Centisome position: 45.2

GC content: 67.02

Gene sequence:

>285_bases
GTGGACGTGGAGCAGCTTCTCAACTATCTGGCGCGGGCCCTGGTCGATCATCCTGACCAGGTCAGCCTGCGCATTTCCGA
GGCGGAAGGGGCCCGGCTCTTCGAGCTGAAGGTCTCCGCCGAGGACGTCGGCAAGGTCATCGGCCGTGACGGGCGCACCG
TGAATGCCCTCCGGACGCTGCTCAATGCCGCCGCACAGAAGTCCGGGCAGAAGGTCCGCCTGGAGATTCTCGACGACCGG
CGCAATGCAGCAGGCGCTCCGGTCGCGCCGGACTCCGCTCAGTGA

Upstream 100 bases:

>100_bases
ACTGGCTGAAGACTGGCGCGACGCCGTCTGAGACCGTTGCGGACCTGATCAAGGTCGCCGGCAAGGCCAAGCCCGCTCCC
GCGGTCTGAGCCACGCCCGA

Downstream 100 bases:

>100_bases
CGGCCACCAGTCCCTATCTGGAGCTGGGATACGTCGCGCGCGCTCACGGGCTGCGTGGCGAGGTCGCCATTCGCGCGCTG
GATCCGGCGTCGGAGACGCT

Product: KH domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MDVEQLLNYLARALVDHPDQVSLRISEAEGARLFELKVSAEDVGKVIGRDGRTVNALRTLLNAAAQKSGQKVRLEILDDR
RNAAGAPVAPDSAQ

Sequences:

>Translated_94_residues
MDVEQLLNYLARALVDHPDQVSLRISEAEGARLFELKVSAEDVGKVIGRDGRTVNALRTLLNAAAQKSGQKVRLEILDDR
RNAAGAPVAPDSAQ
>Mature_94_residues
MDVEQLLNYLARALVDHPDQVSLRISEAEGARLFELKVSAEDVGKVIGRDGRTVNALRTLLNAAAQKSGQKVRLEILDDR
RNAAGAPVAPDSAQ

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR020627 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10164; Mature: 10164

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVEQLLNYLARALVDHPDQVSLRISEAEGARLFELKVSAEDVGKVIGRDGRTVNALRTL
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECHHHHHHHHCCCCCCHHHHHHH
LNAAAQKSGQKVRLEILDDRRNAAGAPVAPDSAQ
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDVEQLLNYLARALVDHPDQVSLRISEAEGARLFELKVSAEDVGKVIGRDGRTVNALRTL
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECHHHHHHHHCCCCCCHHHHHHH
LNAAAQKSGQKVRLEILDDRRNAAGAPVAPDSAQ
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]