Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
---|---|
Accession | NC_008095 |
Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108758378
Identifier: 108758378
GI number: 108758378
Start: 1481479
End: 1482132
Strand: Reverse
Name: 108758378
Synonym: MXAN_1268
Alternate gene names: NA
Gene position: 1482132-1481479 (Counterclockwise)
Preceding gene: 108757400
Following gene: 108763113
Centisome position: 16.22
GC content: 72.02
Gene sequence:
>654_bases ATGTCCGACCGGTCGTCCCTCATCCGTTGGCTCGTCATTCCCGGCGTGAGCCTGGGCGTGCTCATCCTGAGCGCCGCCCT CTCCTACTGGCTGACGCGCCCTGTCCACGACGAGCTGCTGCCCGTCGGACCGCCCCCCGCCGAAGAGCTGCCCGCCCCGC AACCGCCCGGCACACGCATCGCCCCCACGCCCGGCCTGTCGCCGCCCAGCGCCACACCCCCACCGGTGCAGCCTCCGCCC GGCTTTCCGTCCTCGCGGACCGACGTGCCCGCGCCGCCCGCGGCCTCGGGGGACCCGCGGCGCGTGGTGGAGGCAGAGCC GGTGGTCGAATCCACCACCGGCCGCATCCACGCCGACGACATCCGCGCCGCCATCCAAGCGGTGACTCCGCTCGTGCAGC AATGTTTCGAGGACGCGGCACAACGCAACCGGGGTCCGCAGACAGTGAAGCTGCGCTTCACCGTGGAAGCGGGCAGCGAA GGCGGGGTGATGGGCGCGGGCGAGCTGGTGTCCAGCACCATCCCCGACCCCTTCGTGCAGGCATGCGCGCTGGACTCGCT GCTGGACGTCCGCTTCCCGGCGCCCTTTAGCGGAGGAAAGGCGACGGTCGTCTACCCCTTCGAGTTCCGTGTCCCTGGGG AGACTGGCCGGTAG
Upstream 100 bases:
>100_bases GAAGCCGAGGCGCGGTTCGCTCCACTGGCCCAGTGCATGAAGGGCAAGCCCGAGCAGCGCTCGTGCAAGTGAGCCCTGGA GGCATATCCTCCAGGCGTCC
Downstream 100 bases:
>100_bases GGCCCGGTTTTGCGTAAGGTGCCGGAGCCCCCGACCCTTCATGCCCGTTACCGTCGAACAGCTTGGTCCCCATGACGCGG AAGCCCTTCGGGGGCTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSDRSSLIRWLVIPGVSLGVLILSAALSYWLTRPVHDELLPVGPPPAEELPAPQPPGTRIAPTPGLSPPSATPPPVQPPP GFPSSRTDVPAPPAASGDPRRVVEAEPVVESTTGRIHADDIRAAIQAVTPLVQQCFEDAAQRNRGPQTVKLRFTVEAGSE GGVMGAGELVSSTIPDPFVQACALDSLLDVRFPAPFSGGKATVVYPFEFRVPGETGR
Sequences:
>Translated_217_residues MSDRSSLIRWLVIPGVSLGVLILSAALSYWLTRPVHDELLPVGPPPAEELPAPQPPGTRIAPTPGLSPPSATPPPVQPPP GFPSSRTDVPAPPAASGDPRRVVEAEPVVESTTGRIHADDIRAAIQAVTPLVQQCFEDAAQRNRGPQTVKLRFTVEAGSE GGVMGAGELVSSTIPDPFVQACALDSLLDVRFPAPFSGGKATVVYPFEFRVPGETGR >Mature_216_residues SDRSSLIRWLVIPGVSLGVLILSAALSYWLTRPVHDELLPVGPPPAEELPAPQPPGTRIAPTPGLSPPSATPPPVQPPPG FPSSRTDVPAPPAASGDPRRVVEAEPVVESTTGRIHADDIRAAIQAVTPLVQQCFEDAAQRNRGPQTVKLRFTVEAGSEG GVMGAGELVSSTIPDPFVQACALDSLLDVRFPAPFSGGKATVVYPFEFRVPGETGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22773; Mature: 22642
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRSSLIRWLVIPGVSLGVLILSAALSYWLTRPVHDELLPVGPPPAEELPAPQPPGTRI CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCC APTPGLSPPSATPPPVQPPPGFPSSRTDVPAPPAASGDPRRVVEAEPVVESTTGRIHADD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHH IRAAIQAVTPLVQQCFEDAAQRNRGPQTVKLRFTVEAGSEGGVMGAGELVSSTIPDPFVQ HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHH ACALDSLLDVRFPAPFSGGKATVVYPFEFRVPGETGR HHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCC >Mature Secondary Structure SDRSSLIRWLVIPGVSLGVLILSAALSYWLTRPVHDELLPVGPPPAEELPAPQPPGTRI CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCC APTPGLSPPSATPPPVQPPPGFPSSRTDVPAPPAASGDPRRVVEAEPVVESTTGRIHADD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEHHH IRAAIQAVTPLVQQCFEDAAQRNRGPQTVKLRFTVEAGSEGGVMGAGELVSSTIPDPFVQ HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHH ACALDSLLDVRFPAPFSGGKATVVYPFEFRVPGETGR HHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA