Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
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Accession | NC_008095 |
Length | 9,139,763 |
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The map label for this gene is 108757400
Identifier: 108757400
GI number: 108757400
Start: 1482161
End: 1483999
Strand: Reverse
Name: 108757400
Synonym: MXAN_1269
Alternate gene names: NA
Gene position: 1483999-1482161 (Counterclockwise)
Preceding gene: 108760093
Following gene: 108758378
Centisome position: 16.24
GC content: 69.93
Gene sequence:
>1839_bases ATGAACCAGAGCACCACGTACCTGCTGTGTCTCACCGCGCTGGCCACCGTCTCCAGCGGCTGCTTCCTGCGCACGGGCTA CATCCTCGACGCGCTGAACACACCCGGAGACCCGCAGGCGGCGCCGCTGCCCGTGCCCATCCAGGAGCGCGCGGCGCGCA TCACCCGCACGCACCTGGTGGACGCCTACGCCGACCCCACCGAAGCCGCGCGCTGGATGTCCGCGATGGGCAACGCGCCC CAGCCCATCCTCGAGCAACTGGACTGCCTGAAGCAGAGCGCGGGCGGCAGCAACAGCGCGTGCTACGAGCGATTCCTCAA GACCGCCATGGAGCCGCCGCAGTGGGGCCTGCCGTCGCTGCCCACCACGGTGGACCCCGCCGCGCCCTCACCGCGCGAAG TGGACGCCGCGCGCTTCCTGGCCAACACGCTGGGCATCGCCGCGTCGCTGGTGGCCCTGCGTGATGCCCAGGGGGACCGC GTGCCCATCCAGGTGCTCACCCGCGGCATCCGCGAAGGCGCCGAGTCCGCCGCGCAGTACGTCAGCGTCCGCAAGTGGAA CCGCACGCTGGGACGCCCATCCAACGCCATTGTCCTGAGCGGCGGCGGCGCCAATGGCGCGTTCAGCGCGGGGGCCATCT GGCGCCTGCTCGGCGTGCTGGAGCAGTGCCGCGGCAAACCGGCGCCGGAGGGTTGTGGAGACGCGCGTATCGACCTGGCG GCGGGCAGCAGCACCGGCGCGCTCATCAGCACGCTGGTGGACCTGTTCCACACGCCGGGCCACGAAGAGGCCGCGCGCCA GCTCCTCGTCAGCAACTACACCTGCTCGGTGGAGTCGGACCTGTACTGCGTCAACAACACCTGGATTTGGAAGATTGCCT CCAACCTGCGTGGCCTGGTCCAGTTCGACGGCATCTACGGCAAGCTCCGCGCGGCGGTGGTCCCCGAGCAGCTCACCAAC GGCACGGAGCTGGTGGCCGTCTCCGTGGACTTCGACACCGGTGACGTCTTCGGCATCAGCGACCAGGACCCGGCGAACTT CGACCCGAACGCCACCGAACAGCAGCGCGTGGAGGGCATCATCAACGGCGTCGTCGCCTCCATCGTGGAGCCCGTGCTCG CCGACCCGGTGCCGTGGCTGCCGTCACACACCGGGAGGATGAAGGGCTCCTTCTTCGACGGCGGCGTGCGCTCCGGACTG CCGCTGCTCCAAGCCGTTCAGCGCGGTGCCGAGCGCGTGCTGGTCATCTCCACCGGCGGCGTGGAGCCGTCACCGGAGAA CCCGCCGGACAACGCCGTCAGCGTGCTGATGCGCACCATCGACCTTTTCGTCGCCCAGCCGCGCGTGGGTGAGGTGCAGC AGGGGGAGATGGCCGCCGTGGGCCGGCGCTTCGCGGAGCACAACGTCTGCGTGGAGCGCCTGGCGAACGTGGCCGACGCC GCCAGCGTCAACGCCTTCTGCCGCCGCACGGGCATGGGCTTCGTCCCGCGCGAGCCCGCGGCCCTCAAGGCGGCCACCAG CATGTGGCTGGGCTCCGCCCGCTTCGACCAGGTGGCCTCCAGTTGGCGTTCATCGTGGATGTTCCGTCCGGACTCGCAGC TCCAGATGGCCAGCGGCTACGGCTTCTCGCCGGAAGTCATGCGGCCGCTGTTCAAGGAAGGCGTGAAGCACTTCCAGCAG CGTTGCCGTGAAGTGCTGCGCCTCTTCGAGATTCAAGGCACGCTGGCCGCCGCGGAGTGCGACAAGCCGGTGGACGACGC GGTGTCGGAAGCCGAGGCGCGGTTCGCTCCACTGGCCCAGTGCATGAAGGGCAAGCCCGAGCAGCGCTCGTGCAAGTGA
Upstream 100 bases:
>100_bases CCGCGCCACGCCCGCACGCGCGCATGCGTTAACATTCTCCCCGACCGAGGCGGCGAGCCCAGGCACGCGGCGGCGTCGCG CGCCTCTCGGGGGGACATCC
Downstream 100 bases:
>100_bases GCCCTGGAGGCATATCCTCCAGGCGTCCATGTCCGACCGGTCGTCCCTCATCCGTTGGCTCGTCATTCCCGGCGTGAGCC TGGGCGTGCTCATCCTGAGC
Product: patatin-like phospholipase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MNQSTTYLLCLTALATVSSGCFLRTGYILDALNTPGDPQAAPLPVPIQERAARITRTHLVDAYADPTEAARWMSAMGNAP QPILEQLDCLKQSAGGSNSACYERFLKTAMEPPQWGLPSLPTTVDPAAPSPREVDAARFLANTLGIAASLVALRDAQGDR VPIQVLTRGIREGAESAAQYVSVRKWNRTLGRPSNAIVLSGGGANGAFSAGAIWRLLGVLEQCRGKPAPEGCGDARIDLA AGSSTGALISTLVDLFHTPGHEEAARQLLVSNYTCSVESDLYCVNNTWIWKIASNLRGLVQFDGIYGKLRAAVVPEQLTN GTELVAVSVDFDTGDVFGISDQDPANFDPNATEQQRVEGIINGVVASIVEPVLADPVPWLPSHTGRMKGSFFDGGVRSGL PLLQAVQRGAERVLVISTGGVEPSPENPPDNAVSVLMRTIDLFVAQPRVGEVQQGEMAAVGRRFAEHNVCVERLANVADA ASVNAFCRRTGMGFVPREPAALKAATSMWLGSARFDQVASSWRSSWMFRPDSQLQMASGYGFSPEVMRPLFKEGVKHFQQ RCREVLRLFEIQGTLAAAECDKPVDDAVSEAEARFAPLAQCMKGKPEQRSCK
Sequences:
>Translated_612_residues MNQSTTYLLCLTALATVSSGCFLRTGYILDALNTPGDPQAAPLPVPIQERAARITRTHLVDAYADPTEAARWMSAMGNAP QPILEQLDCLKQSAGGSNSACYERFLKTAMEPPQWGLPSLPTTVDPAAPSPREVDAARFLANTLGIAASLVALRDAQGDR VPIQVLTRGIREGAESAAQYVSVRKWNRTLGRPSNAIVLSGGGANGAFSAGAIWRLLGVLEQCRGKPAPEGCGDARIDLA AGSSTGALISTLVDLFHTPGHEEAARQLLVSNYTCSVESDLYCVNNTWIWKIASNLRGLVQFDGIYGKLRAAVVPEQLTN GTELVAVSVDFDTGDVFGISDQDPANFDPNATEQQRVEGIINGVVASIVEPVLADPVPWLPSHTGRMKGSFFDGGVRSGL PLLQAVQRGAERVLVISTGGVEPSPENPPDNAVSVLMRTIDLFVAQPRVGEVQQGEMAAVGRRFAEHNVCVERLANVADA ASVNAFCRRTGMGFVPREPAALKAATSMWLGSARFDQVASSWRSSWMFRPDSQLQMASGYGFSPEVMRPLFKEGVKHFQQ RCREVLRLFEIQGTLAAAECDKPVDDAVSEAEARFAPLAQCMKGKPEQRSCK >Mature_612_residues MNQSTTYLLCLTALATVSSGCFLRTGYILDALNTPGDPQAAPLPVPIQERAARITRTHLVDAYADPTEAARWMSAMGNAP QPILEQLDCLKQSAGGSNSACYERFLKTAMEPPQWGLPSLPTTVDPAAPSPREVDAARFLANTLGIAASLVALRDAQGDR VPIQVLTRGIREGAESAAQYVSVRKWNRTLGRPSNAIVLSGGGANGAFSAGAIWRLLGVLEQCRGKPAPEGCGDARIDLA AGSSTGALISTLVDLFHTPGHEEAARQLLVSNYTCSVESDLYCVNNTWIWKIASNLRGLVQFDGIYGKLRAAVVPEQLTN GTELVAVSVDFDTGDVFGISDQDPANFDPNATEQQRVEGIINGVVASIVEPVLADPVPWLPSHTGRMKGSFFDGGVRSGL PLLQAVQRGAERVLVISTGGVEPSPENPPDNAVSVLMRTIDLFVAQPRVGEVQQGEMAAVGRRFAEHNVCVERLANVADA ASVNAFCRRTGMGFVPREPAALKAATSMWLGSARFDQVASSWRSSWMFRPDSQLQMASGYGFSPEVMRPLFKEGVKHFQQ RCREVLRLFEIQGTLAAAECDKPVDDAVSEAEARFAPLAQCMKGKPEQRSCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65695; Mature: 65695
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSTTYLLCLTALATVSSGCFLRTGYILDALNTPGDPQAAPLPVPIQERAARITRTHLV CCCCHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DAYADPTEAARWMSAMGNAPQPILEQLDCLKQSAGGSNSACYERFLKTAMEPPQWGLPSL HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC PTTVDPAAPSPREVDAARFLANTLGIAASLVALRDAQGDRVPIQVLTRGIREGAESAAQY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VSVRKWNRTLGRPSNAIVLSGGGANGAFSAGAIWRLLGVLEQCRGKPAPEGCGDARIDLA HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE AGSSTGALISTLVDLFHTPGHEEAARQLLVSNYTCSVESDLYCVNNTWIWKIASNLRGLV CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCEEEECCCEEEEEHHHCCHHH QFDGIYGKLRAAVVPEQLTNGTELVAVSVDFDTGDVFGISDQDPANFDPNATEQQRVEGI HCCCHHHHHHHHHCHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHH INGVVASIVEPVLADPVPWLPSHTGRMKGSFFDGGVRSGLPLLQAVQRGAERVLVISTGG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHCCCCEEEEEEECC VEPSPENPPDNAVSVLMRTIDLFVAQPRVGEVQQGEMAAVGRRFAEHNVCVERLANVADA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASVNAFCRRTGMGFVPREPAALKAATSMWLGSARFDQVASSWRSSWMFRPDSQLQMASGY HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCCC GFSPEVMRPLFKEGVKHFQQRCREVLRLFEIQGTLAAAECDKPVDDAVSEAEARFAPLAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHH CMKGKPEQRSCK HHCCCCCCCCCC >Mature Secondary Structure MNQSTTYLLCLTALATVSSGCFLRTGYILDALNTPGDPQAAPLPVPIQERAARITRTHLV CCCCHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH DAYADPTEAARWMSAMGNAPQPILEQLDCLKQSAGGSNSACYERFLKTAMEPPQWGLPSL HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCC PTTVDPAAPSPREVDAARFLANTLGIAASLVALRDAQGDRVPIQVLTRGIREGAESAAQY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VSVRKWNRTLGRPSNAIVLSGGGANGAFSAGAIWRLLGVLEQCRGKPAPEGCGDARIDLA HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE AGSSTGALISTLVDLFHTPGHEEAARQLLVSNYTCSVESDLYCVNNTWIWKIASNLRGLV CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCEEEECCCEEEEEHHHCCHHH QFDGIYGKLRAAVVPEQLTNGTELVAVSVDFDTGDVFGISDQDPANFDPNATEQQRVEGI HCCCHHHHHHHHHCHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHH INGVVASIVEPVLADPVPWLPSHTGRMKGSFFDGGVRSGLPLLQAVQRGAERVLVISTGG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHCCCCEEEEEEECC VEPSPENPPDNAVSVLMRTIDLFVAQPRVGEVQQGEMAAVGRRFAEHNVCVERLANVADA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ASVNAFCRRTGMGFVPREPAALKAATSMWLGSARFDQVASSWRSSWMFRPDSQLQMASGY HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCCC GFSPEVMRPLFKEGVKHFQQRCREVLRLFEIQGTLAAAECDKPVDDAVSEAEARFAPLAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHH CMKGKPEQRSCK HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA