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The map label for this gene is clpB [H]

Identifier: 108758075

GI number: 108758075

Start: 6021917

End: 6024574

Strand: Direct

Name: clpB [H]

Synonym: MXAN_4813

Alternate gene names: 108758075

Gene position: 6021917-6024574 (Clockwise)

Preceding gene: 108762900

Following gene: 108763839

Centisome position: 65.89

GC content: 70.65

Gene sequence:

>2658_bases
TTGGGGGCTCCCATTCGCGTCGATCCGAAAGCGCTCGTCCGTCGCCTGACGCCCACCTCTACCCGTCTGCTCGAGGCCGC
CGTGGCCCGGGCCAGCGCGGGACGGTTCTATGAAATCGTCCCGGAGCACATGCTGGTGCAGATGCTGGAGCCGGAGGACT
CGGACGTCGCGCGCATCCTCCAGCAGTTCGGCGTGGACCGCCGCCACCTGCTGGCCAGCATGGAGCGCGCCCTCCAGGGC
CTGCGCGCGGGCAGCTCCGGCCGGCCCGTCTTCTCCGAGACGCTGTTCCAGTGGTTCGAGGAAGCGTGGCTCCTGGCTTC
CGTGGAGCAGGGCGCCACGCGGCTGCGCTCGGGCCTGCTGTTCGCCCAGTTCGTCAGCCGGCGCGCGCGCTACACCGCGG
AGCTGTTCCCCGAGCTGGACGCCATCAGCCGCGACGAGCTGATGAGCTCGCTGGACGTGGTGCTGCGGCCCTCGCCCGAG
AATGTCGAGGTCGCCTCCGCGGATGCCGCCGCCAGTGGCGCCGCGGGAGGCGCGGCCAGTGGCGCGGGCGGCCGTGGGGA
TGAAGCCCTCAAGCGCTTCGCCACGTCCTTCACCGGCCGGGTGCGCGAGGGGAAGATCGACCCCATCTTCGGCCGGCACC
GCGAAATCCGGCAGATGGTGGACATCCTCTCCCGCCGCCGGAAGAACAACCCCATCCTGGTGGGCGAGCCCGGCGTGGGC
AAGACGGCGCTGGTGGAGGGCCTGGCCTGGGCCATCGTCCGGGGCGAGGTGCCCGACGCGCTGAAGAACGTGGAGCTGCT
GGGGCTGGACCTGGGCCTGCTCCAGGCGGGCGCGGGCGTGCGCGGCGAGTTCGAGAACCGCCTCAAGGCCGTCATCTCCG
AGGTGAAGGCCTCCCCCACCCCCATCATCCTGTTCATCGACGAGGCGCACACCATCATCGGCGCGGGCGGCTCGCAGGGC
GGCACGGACGCGTCCAACCTGCTCAAGCCGGCGCTGGCGCGCGGTGAGCTGCGCACGCTCGCGGCCACCACCTGGGCCGA
GTACAAGAAGTACTTCGAGAAGGACGCCGCGCTGGAGCGGCGCTTCCAGCCGGTCAAGGTGGAGGAGCCCAGCGAGGAGG
ACGCGGAGCTGATGCTGCGCGGCCTGCGCCCCACGTACGAAGCGGCCCACGGCGTCATCATCCGCGACGAAGCCGTCACC
GCCGCGGTGCGCCTGTCCAGCCGGTACATCTCCGGCCGGCAGCTCCCGGACAAGGCGGTGGACCTGCTGGACACGTCCGC
GGCCCGCGTGAAGATTGAGCTGTCCACCCGGCCCGAGGAGCTGGTGCAACTGGACCAGGAGATTTCGGCGCTGGAGCGCG
AGCGCGACACGCGCAAGCGCGACCTCGCCGAGGGCACGGGCGGCCCGGACGAACAGACGTCCCTGGAGGCCGCCGAGGCG
AAGCTGAGCGCCACGGTGGATGCACGAGCCACGCTGCATGCGCGCTGGGAGACGGAGCGTACGGCCGTCGCGGCGCTGAT
GGAGGCCCGCAAGGCCCTGCGCGAGGCCGCTCCGGACACGGACTCCGCGCCACTGAAGGCGGCCGTGGACGAAGCTGCGG
CGAAGCTGGCGGCCACGCGCGGCGAGGTGCCGCTGGTACACGCGGACGTGGACGCGGACATCGTCGCGCGGGTGGTGGCG
GGCTGGACGGGCGTGCCCGTGGGGAAGATGCGCAGCGACCTGCTGGAGTCGGTGCTCAACCTGGAGGACAAGCTCCGGGG
CCGGGTGCGGGGCCAGGAGGCGGCGCTGAAGAAGGTTGCGGAAATCATCCGCATCTCCCAGGCCGGCATCCGCAACCCGG
ACACGCCCATTGGCGTGATGCTCTTCGTGGGCCCCAGCGGCGTGGGCAAGACGGAGACGGCGCTGGCGCTGGCGGACGCG
CTCTATGGCGGCGAGCGCTTCATGACGACGCTCAACATGAGCGAGTTCCAGGAGAAGCACACGGTGAGCCGGCTCATCGG
CTCGCCGCCGGGCTACGTGGGATACGGCGAGGGCGGCCTGCTGACGGAAGCCGTGCGTCAGCGGCCCTACTCCGTCGTGC
TGCTGGACGAGTGCGAGAAGGCCGACCTGGAGGTGATGAACCTCTTCTACCAGGTGTTCGACAAGGGCTCGCTGACGGAC
GGCGAGGGCCGCGCGGTGGACTTCAAGAACACCGTGCTCATCCTCACCAGCAACCTGGCCTCGGACCTGGTGATGCGGAT
GTTCGAGGACGGCGCGCAGCCCACCTCCGATGAGGTGCTGTCGGTGATTCGCCCCGCGCTCAGCCAGCACTTCAAGCCGG
CGCTGCTGGCTCGAATGACGGTCGTCCCCTTCGGGCCGGTGCAGCGCGACGTGATGCGCCAGATTGCCGAGATGAAGCTG
GCCAAGCTGGTGAGCCGGCTGCGCACGGCGCACAACGTGGAGACGACGCTGGCGCCAGAGTTGCTGGACGAGCTTGCGCG
CCGCTGCACGGAGTCGGAGATGGGGGCGCGCAACATGGAGCAGATTCTCCAGGGCTCGCTGATGCCGGCGCTGTCCCGCG
AGTTGCTGCAGCACCTGGTGAGCGGCGCGGTGCCCCCGAAGCTGCATGTGGCCCTGACCGAGGGAGGCGACTGGGACCTC
CGGTTCGCCGAGGCCTGA

Upstream 100 bases:

>100_bases
TCCCCGTGGTGAAATGAGTTGTTAGAGCAGGCGGGCGCGGCGCGCGGGGATTTACGCCGCCACGGCGCGCCCGATATACC
GTCCATCACCGCTTTCCTTT

Downstream 100 bases:

>100_bases
GAGAATCCATGAAACGAACGCTTCAGGCCTCCGCCGTCGCGCTGTCGCTGCTGGCCGGCTGCGCCACCGTCCCCAAGCCG
TCGATGTGCTTCGCCGAGGC

Product: ATP-dependent chaperone protein ClpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 885; Mature: 884

Protein sequence:

>885_residues
MGAPIRVDPKALVRRLTPTSTRLLEAAVARASAGRFYEIVPEHMLVQMLEPEDSDVARILQQFGVDRRHLLASMERALQG
LRAGSSGRPVFSETLFQWFEEAWLLASVEQGATRLRSGLLFAQFVSRRARYTAELFPELDAISRDELMSSLDVVLRPSPE
NVEVASADAAASGAAGGAASGAGGRGDEALKRFATSFTGRVREGKIDPIFGRHREIRQMVDILSRRRKNNPILVGEPGVG
KTALVEGLAWAIVRGEVPDALKNVELLGLDLGLLQAGAGVRGEFENRLKAVISEVKASPTPIILFIDEAHTIIGAGGSQG
GTDASNLLKPALARGELRTLAATTWAEYKKYFEKDAALERRFQPVKVEEPSEEDAELMLRGLRPTYEAAHGVIIRDEAVT
AAVRLSSRYISGRQLPDKAVDLLDTSAARVKIELSTRPEELVQLDQEISALERERDTRKRDLAEGTGGPDEQTSLEAAEA
KLSATVDARATLHARWETERTAVAALMEARKALREAAPDTDSAPLKAAVDEAAAKLAATRGEVPLVHADVDADIVARVVA
GWTGVPVGKMRSDLLESVLNLEDKLRGRVRGQEAALKKVAEIIRISQAGIRNPDTPIGVMLFVGPSGVGKTETALALADA
LYGGERFMTTLNMSEFQEKHTVSRLIGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDECEKADLEVMNLFYQVFDKGSLTD
GEGRAVDFKNTVLILTSNLASDLVMRMFEDGAQPTSDEVLSVIRPALSQHFKPALLARMTVVPFGPVQRDVMRQIAEMKL
AKLVSRLRTAHNVETTLAPELLDELARRCTESEMGARNMEQILQGSLMPALSRELLQHLVSGAVPPKLHVALTEGGDWDL
RFAEA

Sequences:

>Translated_885_residues
MGAPIRVDPKALVRRLTPTSTRLLEAAVARASAGRFYEIVPEHMLVQMLEPEDSDVARILQQFGVDRRHLLASMERALQG
LRAGSSGRPVFSETLFQWFEEAWLLASVEQGATRLRSGLLFAQFVSRRARYTAELFPELDAISRDELMSSLDVVLRPSPE
NVEVASADAAASGAAGGAASGAGGRGDEALKRFATSFTGRVREGKIDPIFGRHREIRQMVDILSRRRKNNPILVGEPGVG
KTALVEGLAWAIVRGEVPDALKNVELLGLDLGLLQAGAGVRGEFENRLKAVISEVKASPTPIILFIDEAHTIIGAGGSQG
GTDASNLLKPALARGELRTLAATTWAEYKKYFEKDAALERRFQPVKVEEPSEEDAELMLRGLRPTYEAAHGVIIRDEAVT
AAVRLSSRYISGRQLPDKAVDLLDTSAARVKIELSTRPEELVQLDQEISALERERDTRKRDLAEGTGGPDEQTSLEAAEA
KLSATVDARATLHARWETERTAVAALMEARKALREAAPDTDSAPLKAAVDEAAAKLAATRGEVPLVHADVDADIVARVVA
GWTGVPVGKMRSDLLESVLNLEDKLRGRVRGQEAALKKVAEIIRISQAGIRNPDTPIGVMLFVGPSGVGKTETALALADA
LYGGERFMTTLNMSEFQEKHTVSRLIGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDECEKADLEVMNLFYQVFDKGSLTD
GEGRAVDFKNTVLILTSNLASDLVMRMFEDGAQPTSDEVLSVIRPALSQHFKPALLARMTVVPFGPVQRDVMRQIAEMKL
AKLVSRLRTAHNVETTLAPELLDELARRCTESEMGARNMEQILQGSLMPALSRELLQHLVSGAVPPKLHVALTEGGDWDL
RFAEA
>Mature_884_residues
GAPIRVDPKALVRRLTPTSTRLLEAAVARASAGRFYEIVPEHMLVQMLEPEDSDVARILQQFGVDRRHLLASMERALQGL
RAGSSGRPVFSETLFQWFEEAWLLASVEQGATRLRSGLLFAQFVSRRARYTAELFPELDAISRDELMSSLDVVLRPSPEN
VEVASADAAASGAAGGAASGAGGRGDEALKRFATSFTGRVREGKIDPIFGRHREIRQMVDILSRRRKNNPILVGEPGVGK
TALVEGLAWAIVRGEVPDALKNVELLGLDLGLLQAGAGVRGEFENRLKAVISEVKASPTPIILFIDEAHTIIGAGGSQGG
TDASNLLKPALARGELRTLAATTWAEYKKYFEKDAALERRFQPVKVEEPSEEDAELMLRGLRPTYEAAHGVIIRDEAVTA
AVRLSSRYISGRQLPDKAVDLLDTSAARVKIELSTRPEELVQLDQEISALERERDTRKRDLAEGTGGPDEQTSLEAAEAK
LSATVDARATLHARWETERTAVAALMEARKALREAAPDTDSAPLKAAVDEAAAKLAATRGEVPLVHADVDADIVARVVAG
WTGVPVGKMRSDLLESVLNLEDKLRGRVRGQEAALKKVAEIIRISQAGIRNPDTPIGVMLFVGPSGVGKTETALALADAL
YGGERFMTTLNMSEFQEKHTVSRLIGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDECEKADLEVMNLFYQVFDKGSLTDG
EGRAVDFKNTVLILTSNLASDLVMRMFEDGAQPTSDEVLSVIRPALSQHFKPALLARMTVVPFGPVQRDVMRQIAEMKLA
KLVSRLRTAHNVETTLAPELLDELARRCTESEMGARNMEQILQGSLMPALSRELLQHLVSGAVPPKLHVALTEGGDWDLR
FAEA

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=317, Percent_Identity=34.0694006309148, Blast_Score=167, Evalue=4e-41,
Organism=Escherichia coli, GI1788943, Length=709, Percent_Identity=44.4287729196051, Blast_Score=547, Evalue=1e-156,
Organism=Escherichia coli, GI1787109, Length=414, Percent_Identity=38.1642512077295, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6320464, Length=689, Percent_Identity=39.477503628447, Blast_Score=481, Evalue=1e-136,
Organism=Saccharomyces cerevisiae, GI6323002, Length=722, Percent_Identity=36.2880886426593, Blast_Score=448, Evalue=1e-126,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 96197; Mature: 96066

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00870 CLPAB_1 ; PS00871 CLPAB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPIRVDPKALVRRLTPTSTRLLEAAVARASAGRFYEIVPEHMLVQMLEPEDSDVARIL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
QQFGVDRRHLLASMERALQGLRAGSSGRPVFSETLFQWFEEAWLLASVEQGATRLRSGLL
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQFVSRRARYTAELFPELDAISRDELMSSLDVVLRPSPENVEVASADAAASGAAGGAAS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCEEECCCCCCCCCCCCCCC
GAGGRGDEALKRFATSFTGRVREGKIDPIFGRHREIRQMVDILSRRRKNNPILVGEPGVG
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
KTALVEGLAWAIVRGEVPDALKNVELLGLDLGLLQAGAGVRGEFENRLKAVISEVKASPT
HHHHHHHHHHHHHCCCCCHHHHCCCCEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
PIILFIDEAHTIIGAGGSQGGTDASNLLKPALARGELRTLAATTWAEYKKYFEKDAALER
CEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RFQPVKVEEPSEEDAELMLRGLRPTYEAAHGVIIRDEAVTAAVRLSSRYISGRQLPDKAV
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCEEEECHHHHHHHHHHHHHCCCCCCCHHHH
DLLDTSAARVKIELSTRPEELVQLDQEISALERERDTRKRDLAEGTGGPDEQTSLEAAEA
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KLSATVDARATLHARWETERTAVAALMEARKALREAAPDTDSAPLKAAVDEAAAKLAATR
HHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
GEVPLVHADVDADIVARVVAGWTGVPVGKMRSDLLESVLNLEDKLRGRVRGQEAALKKVA
CCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHH
EIIRISQAGIRNPDTPIGVMLFVGPSGVGKTETALALADALYGGERFMTTLNMSEFQEKH
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHH
TVSRLIGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDECEKADLEVMNLFYQVFDKGSLTD
HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
GEGRAVDFKNTVLILTSNLASDLVMRMFEDGAQPTSDEVLSVIRPALSQHFKPALLARMT
CCCCEEECCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
VVPFGPVQRDVMRQIAEMKLAKLVSRLRTAHNVETTLAPELLDELARRCTESEMGARNME
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
QILQGSLMPALSRELLQHLVSGAVPPKLHVALTEGGDWDLRFAEA
HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCC
>Mature Secondary Structure 
GAPIRVDPKALVRRLTPTSTRLLEAAVARASAGRFYEIVPEHMLVQMLEPEDSDVARIL
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
QQFGVDRRHLLASMERALQGLRAGSSGRPVFSETLFQWFEEAWLLASVEQGATRLRSGLL
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQFVSRRARYTAELFPELDAISRDELMSSLDVVLRPSPENVEVASADAAASGAAGGAAS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCEEECCCCCCCCCCCCCCC
GAGGRGDEALKRFATSFTGRVREGKIDPIFGRHREIRQMVDILSRRRKNNPILVGEPGVG
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
KTALVEGLAWAIVRGEVPDALKNVELLGLDLGLLQAGAGVRGEFENRLKAVISEVKASPT
HHHHHHHHHHHHHCCCCCHHHHCCCCEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCC
PIILFIDEAHTIIGAGGSQGGTDASNLLKPALARGELRTLAATTWAEYKKYFEKDAALER
CEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RFQPVKVEEPSEEDAELMLRGLRPTYEAAHGVIIRDEAVTAAVRLSSRYISGRQLPDKAV
CCCCCCCCCCCCHHHHHHHHCCCCHHHHHCCEEEECHHHHHHHHHHHHHCCCCCCCHHHH
DLLDTSAARVKIELSTRPEELVQLDQEISALERERDTRKRDLAEGTGGPDEQTSLEAAEA
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KLSATVDARATLHARWETERTAVAALMEARKALREAAPDTDSAPLKAAVDEAAAKLAATR
HHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
GEVPLVHADVDADIVARVVAGWTGVPVGKMRSDLLESVLNLEDKLRGRVRGQEAALKKVA
CCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHH
EIIRISQAGIRNPDTPIGVMLFVGPSGVGKTETALALADALYGGERFMTTLNMSEFQEKH
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHCCCHHHHHHHH
TVSRLIGSPPGYVGYGEGGLLTEAVRQRPYSVVLLDECEKADLEVMNLFYQVFDKGSLTD
HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC
GEGRAVDFKNTVLILTSNLASDLVMRMFEDGAQPTSDEVLSVIRPALSQHFKPALLARMT
CCCCEEECCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH
VVPFGPVQRDVMRQIAEMKLAKLVSRLRTAHNVETTLAPELLDELARRCTESEMGARNME
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
QILQGSLMPALSRELLQHLVSGAVPPKLHVALTEGGDWDLRFAEA
HHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]