| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762900
Identifier: 108762900
GI number: 108762900
Start: 6020862
End: 6021833
Strand: Direct
Name: 108762900
Synonym: MXAN_4812
Alternate gene names: NA
Gene position: 6020862-6021833 (Clockwise)
Preceding gene: 108757915
Following gene: 108758075
Centisome position: 65.88
GC content: 69.03
Gene sequence:
>972_bases GTGGGCTTCTTTCCCCTGGTGGCGTTCTTGGAGCGGCTGACGTCGCAGGCCACGCGCGTGGGCGGCGCGGGGCCCGTCAA CGAGGAGATGATTCGCTTCCGGCACGACCCGTCCCTGGGGTTCCCCTCGGGCGACGTGTCGTCCGTGACGCTCCACCAGG TGCCGGTGCGGGCGGAGGACCCGTATTCGAAGCGGCCGCTCTTCGAGGTGGTGACACGCTTCCTGGGCCTGACGGGCGCG GTGAGTCCCCTGCCCCACTACCTGGCCGAGGAGGTCGCGCAGGAGGACCCGGACCACCCGGTGCGGCGCGAGTTCCTGGA CCTGTTCCACCACCGGCTGCTGTCGCTGCTGTACCGCATCGAGTCGAAGTACCGCGTCACGAGCGAGACGGACACATCCT TCTCGGACCAGTGGTCCCGGCGCCTGCTGGCGCTGGGCGGGTTCGACACCTACGAGAAGGCCCTGGAGGGTACGCTGCCG ACCTGGCGCCTGCTGCGGATTGCCCCGCTGCTGGCCAGCCGGGCGAGGACGTCCGAGCAGTTGGAGGTCGCGCTCGAGGA CGTGCTGGGCGACGACCTGGAGGGCGCGCGGGTGTCGGTGCGCCAGTTCGTGGGCCGCTGGGTGGACATCGACGCCCGGG CGCGGCTGGGCCACTCCAACCACCAACTGGGGCGCAACATGCTGCTGGGCGGCAAGGCCTTCGACCGGACGGGGAAGATT CAAATCCACATCCGGCCGCTGCCGCCGCGCGCCTACAAGCGGCTGATGCAGGAAGGGGACTTGCTGCCACTGGTGAGAGA AGTGGTAGCCCTCTTCGTGAGGGACCCCCTGGAGTACGATTTGGAGCTGGGGCTCACCGAAGGCGTGCAGCACCAGTTCC GGCTCTCCAGCCGGGAGCCGAGTCAGCTCGGGCGGGACACGTGGCTGGGCCTGAGTCAGCAGACGCAGATGAGTGTCCCC GTGGTGAAATGA
Upstream 100 bases:
>100_bases GGCTTCACCCCTCGCAGACGGAGTTCGCGTGGCTTCCGAGGAACGGCTCCCAGACGCTTTTGTAGAGACGGCCCAGAAGC TGGCCGAGCTGGCGCCCCGG
Downstream 100 bases:
>100_bases GTTGTTAGAGCAGGCGGGCGCGGCGCGCGGGGATTTACGCCGCCACGGCGCGCCCGATATACCGTCCATCACCGCTTTCC TTTTTGGGGGCTCCCATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; Type VI Secretion Protein VasG; Protein ImpH
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MGFFPLVAFLERLTSQATRVGGAGPVNEEMIRFRHDPSLGFPSGDVSSVTLHQVPVRAEDPYSKRPLFEVVTRFLGLTGA VSPLPHYLAEEVAQEDPDHPVRREFLDLFHHRLLSLLYRIESKYRVTSETDTSFSDQWSRRLLALGGFDTYEKALEGTLP TWRLLRIAPLLASRARTSEQLEVALEDVLGDDLEGARVSVRQFVGRWVDIDARARLGHSNHQLGRNMLLGGKAFDRTGKI QIHIRPLPPRAYKRLMQEGDLLPLVREVVALFVRDPLEYDLELGLTEGVQHQFRLSSREPSQLGRDTWLGLSQQTQMSVP VVK
Sequences:
>Translated_323_residues MGFFPLVAFLERLTSQATRVGGAGPVNEEMIRFRHDPSLGFPSGDVSSVTLHQVPVRAEDPYSKRPLFEVVTRFLGLTGA VSPLPHYLAEEVAQEDPDHPVRREFLDLFHHRLLSLLYRIESKYRVTSETDTSFSDQWSRRLLALGGFDTYEKALEGTLP TWRLLRIAPLLASRARTSEQLEVALEDVLGDDLEGARVSVRQFVGRWVDIDARARLGHSNHQLGRNMLLGGKAFDRTGKI QIHIRPLPPRAYKRLMQEGDLLPLVREVVALFVRDPLEYDLELGLTEGVQHQFRLSSREPSQLGRDTWLGLSQQTQMSVP VVK >Mature_322_residues GFFPLVAFLERLTSQATRVGGAGPVNEEMIRFRHDPSLGFPSGDVSSVTLHQVPVRAEDPYSKRPLFEVVTRFLGLTGAV SPLPHYLAEEVAQEDPDHPVRREFLDLFHHRLLSLLYRIESKYRVTSETDTSFSDQWSRRLLALGGFDTYEKALEGTLPT WRLLRIAPLLASRARTSEQLEVALEDVLGDDLEGARVSVRQFVGRWVDIDARARLGHSNHQLGRNMLLGGKAFDRTGKIQ IHIRPLPPRAYKRLMQEGDLLPLVREVVALFVRDPLEYDLELGLTEGVQHQFRLSSREPSQLGRDTWLGLSQQTQMSVPV VK
Specific function: Unknown
COG id: COG3520
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36595; Mature: 36464
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFPLVAFLERLTSQATRVGGAGPVNEEMIRFRHDPSLGFPSGDVSSVTLHQVPVRAED CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC PYSKRPLFEVVTRFLGLTGAVSPLPHYLAEEVAQEDPDHPVRREFLDLFHHRLLSLLYRI CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ESKYRVTSETDTSFSDQWSRRLLALGGFDTYEKALEGTLPTWRLLRIAPLLASRARTSEQ HHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH LEVALEDVLGDDLEGARVSVRQFVGRWVDIDARARLGHSNHQLGRNMLLGGKAFDRTGKI HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCHHEECCCCCCCCCEE QIHIRPLPPRAYKRLMQEGDLLPLVREVVALFVRDPLEYDLELGLTEGVQHQFRLSSREP EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCH SQLGRDTWLGLSQQTQMSVPVVK HHHCHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure GFFPLVAFLERLTSQATRVGGAGPVNEEMIRFRHDPSLGFPSGDVSSVTLHQVPVRAED CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCC PYSKRPLFEVVTRFLGLTGAVSPLPHYLAEEVAQEDPDHPVRREFLDLFHHRLLSLLYRI CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH ESKYRVTSETDTSFSDQWSRRLLALGGFDTYEKALEGTLPTWRLLRIAPLLASRARTSEQ HHHHEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHH LEVALEDVLGDDLEGARVSVRQFVGRWVDIDARARLGHSNHQLGRNMLLGGKAFDRTGKI HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCHHHHCCHHEECCCCCCCCCEE QIHIRPLPPRAYKRLMQEGDLLPLVREVVALFVRDPLEYDLELGLTEGVQHQFRLSSREP EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCH SQLGRDTWLGLSQQTQMSVPVVK HHHCHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA