| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is thlA [H]
Identifier: 108757905
GI number: 108757905
Start: 4555839
End: 4557020
Strand: Reverse
Name: thlA [H]
Synonym: MXAN_3791
Alternate gene names: 108757905
Gene position: 4557020-4555839 (Counterclockwise)
Preceding gene: 108758869
Following gene: 108764087
Centisome position: 49.86
GC content: 69.46
Gene sequence:
>1182_bases ATGGCTCGTGACGTCGTCATCGTGGGCGCGGCCCGTACCCCCATTGGTGCCTTTCAGGGCGCGCTCGCCAAGCTGACGGC CCCGCAGCTGGGCGCGATCGCGATCAAGGCGGCGCTGGAGCGCGCGGGCGTGAAGCCCGAGGCCGTTCAGGAAGTCATCC TGGGCTGTGTGCTCACCGCGGGCGTGGGCCAGGCGCCCGCTCGCCAGGCGGCCATCTTCGCCGGCCTGCCCGAGACGGTT CCCGCCACCACGCTCAACAAGGTCTGTGGCTCCGGCCTCAAGGCCGTCAGCGCGGGCGCGCAGGCCATTGCCCTGGGTGA CGCGGACGTCGTCGTCGTGGGCGGCATGGAGTCCATGAGCAACGCGCCGTACATCAGCCACACGATGCGTGGCGGCGCGC GCATGGGCAACGTGGAATTCAAGGACGCGATGATCCACGACGGCCTCTGGGACGTGTACGGCAACGTCCACATGGGCATC TGCGCCGAGGAGTGCGCCACGACGCAGGACATCAGCCGCTCGCAGCAGGACGAGTACGCGCTGGAGTCCACGCGCCGCGC CATCCAGGCCCAGAAGGAAGGCCTGTTCAAGGCGGAGATCGTCCCGGTCCAGATTCCGGGCAAGAAGCCGGAGGACGTCG TCACCGTCTCCGACGACGAGGGGCCCCGCAACGCGAAGCCGGAGAAGATTCCGGGCCTGAAGCCGGTGTTCAAGAAGGAC GGCACGGTGACGGCCGCCAACGCGTCCTCCATCAACGACGGCGCCGCGGCGCTGGTGCTGATGAGCGAGGAGCGCGCGAA GGCCGAGGGCCGCGCCATCCTGGGCCGCATCACGGGCTACGCCCAGGCGGCGCGCAAGCCGGTGGAGTTCACCATCGCGC CCACGGACGCCATCAACAAGCTGCTGAAGAAGCAGGGCATCAGCGCGGGTGACGTGGACCTCTGGGAGATCAACGAGGCG TTCGCGGTGGTGTCCATCGCGAACAACCGGCTGCTCGGCCTGGACGTGTCGAAAGTGAACGTGCGCGGCGGCGCGGTGGC GCTGGGGCACCCGATTGGCGCGTCCGGCGCGCGCGTGCTGGTGACGCTGCTGCAGACGATGCAGGACCTGGACAAGAAGC GTGGCGTCGCGTCGCTCTGCATCGGCGGCGGCGAGGGCATCGCGCTGATGGTGGAGCGCTGA
Upstream 100 bases:
>100_bases ACGAGCAAGGATGCTTGAACTCAGGGAAGTGGCCGGTGATAAGGGCCCCCGACACTGTTATCGAAGAGCATCCGCACATC CTCAAGAGGAGGCAGGTTTC
Downstream 100 bases:
>100_bases ACTTCCTCTCCCAATAGGAGAGGGGCACGGGGTGGGGGCCTGCCAAGGGCCTTCACCCCGTTCGCACATGCGGGAGGGCG GATGAACAAGGTCTACGCGA
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MARDVVIVGAARTPIGAFQGALAKLTAPQLGAIAIKAALERAGVKPEAVQEVILGCVLTAGVGQAPARQAAIFAGLPETV PATTLNKVCGSGLKAVSAGAQAIALGDADVVVVGGMESMSNAPYISHTMRGGARMGNVEFKDAMIHDGLWDVYGNVHMGI CAEECATTQDISRSQQDEYALESTRRAIQAQKEGLFKAEIVPVQIPGKKPEDVVTVSDDEGPRNAKPEKIPGLKPVFKKD GTVTAANASSINDGAAALVLMSEERAKAEGRAILGRITGYAQAARKPVEFTIAPTDAINKLLKKQGISAGDVDLWEINEA FAVVSIANNRLLGLDVSKVNVRGGAVALGHPIGASGARVLVTLLQTMQDLDKKRGVASLCIGGGEGIALMVER
Sequences:
>Translated_393_residues MARDVVIVGAARTPIGAFQGALAKLTAPQLGAIAIKAALERAGVKPEAVQEVILGCVLTAGVGQAPARQAAIFAGLPETV PATTLNKVCGSGLKAVSAGAQAIALGDADVVVVGGMESMSNAPYISHTMRGGARMGNVEFKDAMIHDGLWDVYGNVHMGI CAEECATTQDISRSQQDEYALESTRRAIQAQKEGLFKAEIVPVQIPGKKPEDVVTVSDDEGPRNAKPEKIPGLKPVFKKD GTVTAANASSINDGAAALVLMSEERAKAEGRAILGRITGYAQAARKPVEFTIAPTDAINKLLKKQGISAGDVDLWEINEA FAVVSIANNRLLGLDVSKVNVRGGAVALGHPIGASGARVLVTLLQTMQDLDKKRGVASLCIGGGEGIALMVER >Mature_392_residues ARDVVIVGAARTPIGAFQGALAKLTAPQLGAIAIKAALERAGVKPEAVQEVILGCVLTAGVGQAPARQAAIFAGLPETVP ATTLNKVCGSGLKAVSAGAQAIALGDADVVVVGGMESMSNAPYISHTMRGGARMGNVEFKDAMIHDGLWDVYGNVHMGIC AEECATTQDISRSQQDEYALESTRRAIQAQKEGLFKAEIVPVQIPGKKPEDVVTVSDDEGPRNAKPEKIPGLKPVFKKDG TVTAANASSINDGAAALVLMSEERAKAEGRAILGRITGYAQAARKPVEFTIAPTDAINKLLKKQGISAGDVDLWEINEAF AVVSIANNRLLGLDVSKVNVRGGAVALGHPIGASGARVLVTLLQTMQDLDKKRGVASLCIGGGEGIALMVER
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=392, Percent_Identity=50.5102040816327, Blast_Score=358, Evalue=4e-99, Organism=Homo sapiens, GI4557237, Length=392, Percent_Identity=47.9591836734694, Blast_Score=358, Evalue=4e-99, Organism=Homo sapiens, GI167614485, Length=397, Percent_Identity=41.5617128463476, Blast_Score=292, Evalue=4e-79, Organism=Homo sapiens, GI4501853, Length=397, Percent_Identity=40.3022670025189, Blast_Score=228, Evalue=7e-60, Organism=Homo sapiens, GI4504327, Length=426, Percent_Identity=33.0985915492958, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI194353979, Length=394, Percent_Identity=31.4720812182741, Blast_Score=139, Evalue=4e-33, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=50.2551020408163, Blast_Score=372, Evalue=1e-104, Organism=Escherichia coli, GI1788554, Length=393, Percent_Identity=51.9083969465649, Blast_Score=348, Evalue=4e-97, Organism=Escherichia coli, GI1787663, Length=401, Percent_Identity=39.1521197007481, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI48994986, Length=400, Percent_Identity=38, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI1788683, Length=418, Percent_Identity=29.1866028708134, Blast_Score=154, Evalue=1e-38, Organism=Caenorhabditis elegans, GI25147385, Length=391, Percent_Identity=46.0358056265985, Blast_Score=341, Evalue=4e-94, Organism=Caenorhabditis elegans, GI17535921, Length=393, Percent_Identity=43.765903307888, Blast_Score=317, Evalue=8e-87, Organism=Caenorhabditis elegans, GI133906874, Length=391, Percent_Identity=42.7109974424552, Blast_Score=301, Evalue=6e-82, Organism=Caenorhabditis elegans, GI17535917, Length=393, Percent_Identity=37.1501272264631, Blast_Score=232, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17551802, Length=424, Percent_Identity=32.0754716981132, Blast_Score=197, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6325229, Length=400, Percent_Identity=49.75, Blast_Score=360, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6322031, Length=398, Percent_Identity=36.6834170854271, Blast_Score=214, Evalue=2e-56, Organism=Drosophila melanogaster, GI24640423, Length=391, Percent_Identity=51.9181585677749, Blast_Score=384, Evalue=1e-107, Organism=Drosophila melanogaster, GI24655093, Length=391, Percent_Identity=52.6854219948849, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI17648125, Length=396, Percent_Identity=41.1616161616162, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI17137578, Length=428, Percent_Identity=33.1775700934579, Blast_Score=202, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 40714; Mature: 40583
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS00098 THIOLASE_1 ; PS00737 THIOLASE_2 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDVVIVGAARTPIGAFQGALAKLTAPQLGAIAIKAALERAGVKPEAVQEVILGCVLTA CCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GVGQAPARQAAIFAGLPETVPATTLNKVCGSGLKAVSAGAQAIALGDADVVVVGGMESMS CCCCCCCHHHHEECCCCCCCCHHHHHHHHCCCHHHHHCCCEEEEECCCCEEEEECHHHCC NAPYISHTMRGGARMGNVEFKDAMIHDGLWDVYGNVHMGICAEECATTQDISRSQQDEYA CCCCHHHHHCCCCEECCEEHHHHHHHCCHHHHHCCEEEEEEHHHHCCHHHHHHHHHHHHH LESTRRAIQAQKEGLFKAEIVPVQIPGKKPEDVVTVSDDEGPRNAKPEKIPGLKPVFKKD HHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCC GTVTAANASSINDGAAALVLMSEERAKAEGRAILGRITGYAQAARKPVEFTIAPTDAINK CEEEECCCCCCCCCCEEEEEEECHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHH LLKKQGISAGDVDLWEINEAFAVVSIANNRLLGLDVSKVNVRGGAVALGHPIGASGARVL HHHHCCCCCCCEEEEECCCEEEEEEECCCEEEEEEEEEEEECCCEEEECCCCCCCHHHHH VTLLQTMQDLDKKRGVASLCIGGGEGIALMVER HHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEC >Mature Secondary Structure ARDVVIVGAARTPIGAFQGALAKLTAPQLGAIAIKAALERAGVKPEAVQEVILGCVLTA CCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GVGQAPARQAAIFAGLPETVPATTLNKVCGSGLKAVSAGAQAIALGDADVVVVGGMESMS CCCCCCCHHHHEECCCCCCCCHHHHHHHHCCCHHHHHCCCEEEEECCCCEEEEECHHHCC NAPYISHTMRGGARMGNVEFKDAMIHDGLWDVYGNVHMGICAEECATTQDISRSQQDEYA CCCCHHHHHCCCCEECCEEHHHHHHHCCHHHHHCCEEEEEEHHHHCCHHHHHHHHHHHHH LESTRRAIQAQKEGLFKAEIVPVQIPGKKPEDVVTVSDDEGPRNAKPEKIPGLKPVFKKD HHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHCCC GTVTAANASSINDGAAALVLMSEERAKAEGRAILGRITGYAQAARKPVEFTIAPTDAINK CEEEECCCCCCCCCCEEEEEEECHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHH LLKKQGISAGDVDLWEINEAFAVVSIANNRLLGLDVSKVNVRGGAVALGHPIGASGARVL HHHHCCCCCCCEEEEECCCEEEEEEECCCEEEEEEEEEEEECCCEEEECCCCCCCHHHHH VTLLQTMQDLDKKRGVASLCIGGGEGIALMVER HHHHHHHHHHHHHCCEEEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7867955; 11075929; 11466286; 1685080 [H]