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The map label for this gene is ycfQ [C]

Identifier: 108757390

GI number: 108757390

Start: 6895378

End: 6896103

Strand: Reverse

Name: ycfQ [C]

Synonym: MXAN_5545

Alternate gene names: 108757390

Gene position: 6896103-6895378 (Counterclockwise)

Preceding gene: 108763104

Following gene: 108760534

Centisome position: 75.45

GC content: 65.98

Gene sequence:

>726_bases
ATGAGGGGCTCCAACTCCACCGGAGAGTTACCAGTTGGTAGGTTCCGGTTGGGTAAGTTACTGTTGAGTAGGTTAGAGGT
CAACGTGGCGACGAAGAAGCGACTGTCGGGTGCCGACCGCCGGGTCCAGTTGATGGCGGTGGGGCGAGGCGTGTTCGCCT
CGAAGGGTTACGAGGCGACCTCCATCGAGGAGGTGGCCCATCAGGCGGGCGTGTCGAAGCCCATCGTCTACGAACACTTC
GGCGCGAAAGAGGGGCTCTACGCGGCCATCGTGGACCGGGAGATGGATGACCTGGTGACGCGCGTGTCGGAGAGCATCGC
CTCGGGCACGCCCCGCGAACGGTTCGAGCGGGCGGTGCTGGCCTTCATGACGTACGCCAAGGAGGAGCCCGCGGGCTTCG
CGGTGATGACGCGCGATTCACCGCTGGCGGCTGGACGGCGAGGCCTGACGCGCGTCATCGACGACCTCGCGCTGCGGGTC
TCGGACATCTTCAAGAGCGAGTTCGAGCACGCTGGCTACAACCCCAAGGTCGCGCCCATCTATGCGAACGCGTTGGTGGG
CATGGTGACGCAGGTGGGGCAGTGGTGGGCGGAGGATGGGCGCTCCTTCTCGATTGACCACGTCGCGCGCCACGTCGCGG
CGCTCGGGTGGATGGGATTGAGGCACCTGCCGAAGGAACCGGCTGCTTCGAATGGGCGGCGTGGCGCGAAGCGACGCGGC
GGTTGA

Upstream 100 bases:

>100_bases
CCGCGGCCTGGGCGCTCAGGACCGGCCCCGCGATTCGAGGACGGCGAGGACGTTGAGCTCGGCTGTGTCGGACAAGACGG
CTCGGCGAGAGACGGGATAC

Downstream 100 bases:

>100_bases
GTCCCGCGGCGCGCCTTCGCGGCCCGGTTCGAGCATAGGAAACTGGTGGAGCGCCCCGACTTGCCGGAACGCCCGCGCCC
GTCTCAATGACAGCTGGCTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Transcriptional Regulator; Transcriptional Regulator TetR-Family; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; TetR-Family Protein Regulatory Protein; Transcription Regulator; Transcriptional Regulator Tetr Family; TetR-Family Regulatory Protein

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MRGSNSTGELPVGRFRLGKLLLSRLEVNVATKKRLSGADRRVQLMAVGRGVFASKGYEATSIEEVAHQAGVSKPIVYEHF
GAKEGLYAAIVDREMDDLVTRVSESIASGTPRERFERAVLAFMTYAKEEPAGFAVMTRDSPLAAGRRGLTRVIDDLALRV
SDIFKSEFEHAGYNPKVAPIYANALVGMVTQVGQWWAEDGRSFSIDHVARHVAALGWMGLRHLPKEPAASNGRRGAKRRG
G

Sequences:

>Translated_241_residues
MRGSNSTGELPVGRFRLGKLLLSRLEVNVATKKRLSGADRRVQLMAVGRGVFASKGYEATSIEEVAHQAGVSKPIVYEHF
GAKEGLYAAIVDREMDDLVTRVSESIASGTPRERFERAVLAFMTYAKEEPAGFAVMTRDSPLAAGRRGLTRVIDDLALRV
SDIFKSEFEHAGYNPKVAPIYANALVGMVTQVGQWWAEDGRSFSIDHVARHVAALGWMGLRHLPKEPAASNGRRGAKRRG
G
>Mature_241_residues
MRGSNSTGELPVGRFRLGKLLLSRLEVNVATKKRLSGADRRVQLMAVGRGVFASKGYEATSIEEVAHQAGVSKPIVYEHF
GAKEGLYAAIVDREMDDLVTRVSESIASGTPRERFERAVLAFMTYAKEEPAGFAVMTRDSPLAAGRRGLTRVIDDLALRV
SDIFKSEFEHAGYNPKVAPIYANALVGMVTQVGQWWAEDGRSFSIDHVARHVAALGWMGLRHLPKEPAASNGRRGAKRRG
G

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26337; Mature: 26337

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGSNSTGELPVGRFRLGKLLLSRLEVNVATKKRLSGADRRVQLMAVGRGVFASKGYEAT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCHH
SIEEVAHQAGVSKPIVYEHFGAKEGLYAAIVDREMDDLVTRVSESIASGTPRERFERAVL
HHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AFMTYAKEEPAGFAVMTRDSPLAAGRRGLTRVIDDLALRVSDIFKSEFEHAGYNPKVAPI
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
YANALVGMVTQVGQWWAEDGRSFSIDHVARHVAALGWMGLRHLPKEPAASNGRRGAKRRG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
G
C
>Mature Secondary Structure
MRGSNSTGELPVGRFRLGKLLLSRLEVNVATKKRLSGADRRVQLMAVGRGVFASKGYEAT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCCHH
SIEEVAHQAGVSKPIVYEHFGAKEGLYAAIVDREMDDLVTRVSESIASGTPRERFERAVL
HHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AFMTYAKEEPAGFAVMTRDSPLAAGRRGLTRVIDDLALRVSDIFKSEFEHAGYNPKVAPI
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
YANALVGMVTQVGQWWAEDGRSFSIDHVARHVAALGWMGLRHLPKEPAASNGRRGAKRRG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA